MGE detailed information
MGE type: Prophage MGE length: 31733 bp
Accession: NZ_CP030326 Location: 1973304..2005036 Organism: Staphylococcus aureus strain AR_474 Replicon: chromosome
Accession: NZ_CP030326 Location: 1973304..2005036 Organism: Staphylococcus aureus strain AR_474 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC59_RS10265 () | 1969117..1969863 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| CSC59_RS10270 () | 1969868..1970341 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| CSC59_RS10275 () | 1970407..1970664 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| CSC59_RS10280 () | 1970661..1971662 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| CSC59_RS10285 () | 1971667..1973145 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| CSC59_RS10290 () | 1973304..1973759 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| CSC59_RS10295 () | 1974063..1974713 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| CSC59_RS10300 () | 1974794..1975789 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| CSC59_RS10305 () | 1975864..1976490 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| CSC59_RS10310 () | 1976531..1976872 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| CSC59_RS10315 () | 1976973..1977545 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| CSC59_RS10320 () | 1977743..1978755 | - | 1013 | Protein_1909 | IS3 family transposase ISClsp1 | Transposase |
| CSC59_RS10325 () | 1978900..1978995 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1979023..1979080 | - | 58 | - | - | Antitoxin Detail |
| CSC59_RS10330 () | 1979118..1979219 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| CSC59_RS10335 () | 1979197..1979358 | - | 162 | Protein_1912 | transposase | - |
| CSC59_RS10340 () | 1979349..1979843 | - | 495 | Protein_1913 | IS21 family transposase IS232 | Transposase |
| CSC59_RS10345 () | 1980295..1981524 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| CSC59_RS10350 () | 1981517..1983073 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| CSC59_RS10355 () | 1983237..1983371 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| CSC59_RS10360 () | 1983434..1984153 | - | 720 | WP_001038702.1 | Serine protease SplF | VF |
| CSC59_RS10365 () | 1984274..1984993 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| CSC59_RS10370 () | 1985051..1985773 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| CSC59_RS10375 () | 1985898..1986605 | - | 708 | WP_001039427.1 | Serine protease SplA | VF |
| CSC59_RS10385 () | 1987569..1988150 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| CSC59_RS10390 () | 1988623..1988911 | - | 289 | Protein_1922 | BsaG protein | - |
| CSC59_RS10395 () | 1989097..1989570 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| CSC59_RS10400 () | 1989575..1990366 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| CSC59_RS10405 () | 1990736..1991719 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| CSC59_RS10410 () | 1991721..1992656 | - | 936 | WP_000473593.1 | Leucotoxin LukEv | VF |
| CSC59_RS15560 () | 1993552..1993983 | + | 432 | Protein_1927 | hypothetical protein | - |
| CSC59_RS10415 () | 1994020..1994808 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| CSC59_RS10420 () | 1995642..1996136 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| CSC59_RS10425 () | 1996214..1996450 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| CSC59_RS10430 () | 1996471..1997247 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| CSC59_RS10440 () | 1997799..1998575 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| CSC59_RS10445 () | 1998858..1999613 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| CSC59_RS15490 () | 1999652..2000423 | - | 772 | Protein_1934 | Enterotoxin type C-2 | VF |
| CSC59_RS10460 () | 2000577..2001305 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| CSC59_RS10465 () | 2001340..2002059 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| CSC59_RS10470 () | 2002340..2003122 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| CSC59_RS10515 () | 2004482..2005036 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| CSC59_RS10525 () | 2005359..2006759 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| CSC59_RS10530 () | 2006783..2007706 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| CSC59_RS10535 () | 2007764..2008801 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| CSC59_RS10540 () | 2008791..2008901 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| CSC59_RS10545 () | 2009064..2009567 | + | 504 | WP_000737975.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.001 |