MGE detailed information
MGE type: Prophage MGE length: 44874 bp
Accession: NZ_CP030326 Location: 1075552..1120425 Organism: Staphylococcus aureus strain AR_474 Replicon: chromosome
Accession: NZ_CP030326 Location: 1075552..1120425 Organism: Staphylococcus aureus strain AR_474 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC59_RS05735 () | 1070871..1072355 | + | 1485 | WP_000340119.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
| CSC59_RS05740 () | 1072336..1072596 | + | 261 | WP_001795833.1 | YueH family protein | - |
| CSC59_RS05745 () | 1072596..1074158 | + | 1563 | WP_001049950.1 | peptide chain release factor 3 | - |
| CSC59_RS05750 () | 1074460..1075263 | + | 804 | WP_000928413.1 | TerC family protein | - |
| CSC59_RS05755 () | 1075552..1076757 | - | 1206 | WP_000264741.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CSC59_RS05760 () | 1076883..1077497 | + | 615 | WP_000191459.1 | hypothetical protein | - |
| CSC59_RS05765 () | 1077494..1077640 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| CSC59_RS05770 () | 1077870..1078454 | - | 585 | WP_000825948.1 | hypothetical protein | - |
| CSC59_RS05775 () | 1078472..1078933 | - | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| CSC59_RS05780 () | 1078946..1079260 | - | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CSC59_RS05785 () | 1079412..1079648 | + | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| CSC59_RS05790 () | 1079662..1080438 | + | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| CSC59_RS05795 () | 1080467..1080610 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| CSC59_RS05800 () | 1080600..1080809 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| CSC59_RS05805 () | 1080865..1081110 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| CSC59_RS05810 () | 1081079..1081444 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| CSC59_RS05815 () | 1081499..1081714 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| CSC59_RS05820 () | 1081739..1082002 | + | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| CSC59_RS05825 () | 1082015..1082176 | + | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| CSC59_RS05830 () | 1082255..1082578 | + | 324 | WP_000175002.1 | hypothetical protein | - |
| CSC59_RS05835 () | 1082593..1082955 | + | 363 | WP_000985976.1 | hypothetical protein | - |
| CSC59_RS05840 () | 1082952..1084118 | + | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| CSC59_RS05845 () | 1084144..1084701 | + | 558 | WP_000645042.1 | DUF2815 family protein | - |
| CSC59_RS05850 () | 1084770..1086722 | + | 1953 | WP_078055733.1 | DNA polymerase | - |
| CSC59_RS05855 () | 1086735..1086920 | + | 186 | WP_001164630.1 | DUF3113 family protein | - |
| CSC59_RS05860 () | 1086920..1087321 | + | 402 | WP_000113974.1 | PVL family protein | - |
| CSC59_RS05865 () | 1087321..1087575 | + | 255 | WP_000022736.1 | DUF3310 domain-containing protein | - |
| CSC59_RS05870 () | 1087575..1087823 | + | 249 | WP_060474161.1 | hypothetical protein | - |
| CSC59_RS05875 () | 1087837..1088043 | + | 207 | WP_000693988.1 | hypothetical protein | - |
| CSC59_RS05880 () | 1088046..1088439 | + | 394 | Protein_1070 | hypothetical protein | - |
| CSC59_RS05885 () | 1088436..1088783 | + | 348 | WP_000979209.1 | hypothetical protein | - |
| CSC59_RS05890 () | 1088780..1089169 | + | 390 | WP_000219084.1 | acetyltransferase | - |
| CSC59_RS05895 () | 1089162..1089410 | + | 249 | WP_001065051.1 | DUF1024 family protein | - |
| CSC59_RS05900 () | 1089403..1089939 | + | 537 | WP_000185680.1 | dUTPase | - |
| CSC59_RS05905 () | 1089976..1090182 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| CSC59_RS05910 () | 1090179..1090565 | + | 387 | WP_000592211.1 | hypothetical protein | - |
| CSC59_RS05915 () | 1090562..1090714 | + | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| CSC59_RS05920 () | 1090782..1090982 | + | 201 | WP_000265252.1 | DUF1514 family protein | - |
| CSC59_RS05930 () | 1091270..1093717 | + | 2448 | WP_000884878.1 | virulence-associated E family protein | - |
| CSC59_RS05940 () | 1093820..1093924 | - | 105 | WP_015978074.1 | hypothetical protein | - |
| CSC59_RS05945 () | 1094058..1094348 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| CSC59_RS05950 () | 1094329..1095696 | + | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| CSC59_RS05955 () | 1095709..1096146 | + | 438 | WP_000513699.1 | transcriptional regulator | - |
| CSC59_RS05960 () | 1096303..1096617 | + | 315 | WP_000160689.1 | HNH endonuclease | - |
| CSC59_RS05965 () | 1096746..1097051 | + | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| CSC59_RS05970 () | 1097041..1098732 | + | 1692 | WP_000153555.1 | terminase large subunit | - |
| CSC59_RS05975 () | 1098737..1099975 | + | 1239 | WP_001100670.1 | phage portal protein | - |
| CSC59_RS05980 () | 1099959..1100732 | + | 774 | WP_000061868.1 | Clp protease ClpP | - |
| CSC59_RS05985 () | 1100744..1101907 | + | 1164 | WP_001142735.1 | phage major capsid protein | - |
| CSC59_RS05990 () | 1101976..1102254 | + | 279 | WP_000050975.1 | head-tail connector protein | - |
| CSC59_RS05995 () | 1102266..1102598 | + | 333 | WP_000395501.1 | hypothetical protein | - |
| CSC59_RS06000 () | 1102595..1102996 | + | 402 | WP_000110020.1 | hypothetical protein | - |
| CSC59_RS06005 () | 1102997..1103392 | + | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| CSC59_RS06010 () | 1103427..1104068 | + | 642 | WP_000807540.1 | tail protein | - |
| CSC59_RS06015 () | 1104160..1104615 | + | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| CSC59_RS06020 () | 1104673..1105023 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| CSC59_RS06025 () | 1105065..1105223 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| CSC59_RS06030 () | 1105237..1111437 | + | 6201 | WP_001003430.1 | phage tail tape measure protein | - |
| CSC59_RS06035 () | 1111437..1112261 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| CSC59_RS06040 () | 1112270..1113853 | + | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| CSC59_RS06045 () | 1113853..1114143 | + | 291 | WP_000179864.1 | hypothetical protein | - |
| CSC59_RS06050 () | 1114159..1116069 | + | 1911 | WP_000429552.1 | hypothetical protein | - |
| CSC59_RS06055 () | 1116069..1117535 | + | 1467 | WP_000067128.1 | BppU family phage baseplate upper protein | - |
| CSC59_RS06060 () | 1117535..1117924 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CSC59_RS06065 () | 1117917..1118081 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| CSC59_RS06070 () | 1118127..1118426 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CSC59_RS06075 () | 1118562..1118999 | + | 438 | WP_000354132.1 | phage holin | - |
| CSC59_RS06080 () | 1118980..1120425 | + | 1446 | WP_001148112.1 | SH3 domain-containing protein | - |
| CSC59_RS06085 () | 1120985..1123309 | + | 2325 | WP_001795272.1 | trypsin-like peptidase domain-containing protein | - |
| CSC59_RS06090 () | 1123326..1124684 | + | 1359 | WP_000021865.1 | TrkH family potassium uptake protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|