MGE detailed information
MGE type: Conjugative plasmid MGE length: 82822 bp
Accession: NZ_CP030307 Location: 1..82822 Organism: Klebsiella pneumoniae strain 205880 Replicon: plasmid p205880-5
Accession: NZ_CP030307 Location: 1..82822 Organism: Klebsiella pneumoniae strain 205880 Replicon: plasmid p205880-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DRB04_RS28540 (78) | 78..344 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| DRB04_RS28545 (437) | 437..871 | - | 435 | WP_117064810.1 | post-segregation killing protein PndC | - |
| DRB04_RS28550 (1600) | 1600..2100 | - | 501 | WP_077900469.1 | antirestriction protein ArdA | - |
| DRB04_RS28555 (2562) | 2562..3158 | - | 597 | WP_172692548.1 | hypothetical protein | - |
| DRB04_RS28560 (3155) | 3155..3874 | - | 720 | WP_001276262.1 | plasmid SOS inhibition protein A | - |
| DRB04_RS28565 (3871) | 3871..4305 | - | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| DRB04_RS28570 (4360) | 4360..6318 | - | 1959 | WP_094308811.1 | ParB/RepB/Spo0J family partition protein | - |
| DRB04_RS28575 (6380) | 6380..6613 | - | 234 | WP_024261882.1 | DUF905 domain-containing protein | - |
| DRB04_RS28580 (6670) | 6670..7197 | - | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| DRB04_RS28585 (7966) | 7966..8157 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| DRB04_RS28590 (8154) | 8154..8576 | - | 423 | WP_117064820.1 | DUF1380 family protein | - |
| DRB04_RS28595 (8623) | 8623..9048 | - | 426 | WP_142777227.1 | antirestriction protein | - |
| DRB04_RS28600 (9459) | 9459..10235 | - | 777 | WP_117064822.1 | hypothetical protein | - |
| DRB04_RS28605 (10281) | 10281..10748 | - | 468 | WP_227661723.1 | DUF1380 family protein | - |
| DRB04_RS28610 (10729) | 10729..10950 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| DRB04_RS28615 (10951) | 10951..11634 | - | 684 | WP_001774186.1 | DNA methylase | - |
| DRB04_RS28620 (11711) | 11711..12022 | - | 312 | WP_032317461.1 | hypothetical protein | - |
| DRB04_RS28625 (12019) | 12019..12921 | - | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| DRB04_RS28630 (13339) | 13339..13587 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| DRB04_RS28635 (13584) | 13584..14021 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DRB04_RS28640 (14021) | 14021..15292 | + | 1272 | WP_105910596.1 | Y-family DNA polymerase | - |
| DRB04_RS28645 (15297) | 15297..15689 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| DRB04_RS28650 (15694) | 15694..16665 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| DRB04_RS28655 (16894) | 16894..17538 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| DRB04_RS28660 (17532) | 17532..17807 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| DRB04_RS28665 (17945) | 17945..18724 | - | 780 | WP_032165942.1 | site-specific integrase | - |
| DRB04_RS28670 (18775) | 18775..19545 | - | 771 | WP_001499400.1 | hypothetical protein | - |
| DRB04_RS28675 (19607) | 19607..19921 | - | 315 | WP_001302628.1 | hypothetical protein | - |
| DRB04_RS28680 (20491) | 20491..20748 | + | 258 | WP_094308825.1 | hypothetical protein | - |
| DRB04_RS28685 (20748) | 20748..21338 | + | 591 | WP_102000831.1 | hypothetical protein | - |
| DRB04_RS28690 (21550) | 21550..22602 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| DRB04_RS28695 (22778) | 22778..23380 | + | 603 | WP_094308828.1 | ProQ/FINO family protein | - |
| DRB04_RS30495 (23436) | 23436..23675 | + | 240 | Protein_33 | hypothetical protein | - |
| DRB04_RS28700 (23930) | 23930..24205 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DRB04_RS28705 (24205) | 24205..24489 | - | 285 | WP_001674495.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| DRB04_RS28710 (25394) | 25394..26425 | - | 1032 | WP_000907867.1 | plasmid replication initiator RepA | - |
| DRB04_RS28715 (27429) | 27429..27659 | + | 231 | WP_228772074.1 | ash family protein | - |
| DRB04_RS28720 (27577) | 27577..27864 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| DRB04_RS28725 (28306) | 28306..28839 | + | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| DRB04_RS28730 (29092) | 29092..29775 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| DRB04_RS28735 (29947) | 29947..30201 | + | 255 | WP_074182765.1 | PilI type IV pilus biogenesis protein | - |
| DRB04_RS28740 (30244) | 30244..30531 | + | 288 | WP_074182766.1 | pilJ | - |
| DRB04_RS28745 (31152) | 31152..32219 | + | 1068 | WP_074182768.1 | hypothetical protein | VF |
| DRB04_RS28750 (32219) | 32219..32656 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| DRB04_RS28755 (32670) | 32670..34352 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| DRB04_RS28760 (34345) | 34345..35640 | + | 1296 | WP_064148456.1 | type 4b pilus protein PilO2 | - |
| DRB04_RS28765 (35627) | 35627..36079 | + | 453 | WP_074182770.1 | hypothetical protein | VF |
| DRB04_RS28770 (36090) | 36090..37643 | + | 1554 | WP_042012074.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| DRB04_RS28775 (37656) | 37656..38741 | + | 1086 | WP_063103211.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DRB04_RS28780 (38758) | 38758..39372 | + | 615 | WP_064148457.1 | hypothetical protein | VF |
| DRB04_RS28785 (39382) | 39382..39942 | + | 561 | WP_063124165.1 | hypothetical protein | VF |
| DRB04_RS28790 (39927) | 39927..40583 | + | 657 | WP_074182772.1 | hypothetical protein | VF |
| DRB04_RS28795 (40583) | 40583..41674 | + | 1092 | Protein_53 | hypothetical protein | VF |
| DRB04_RS28800 (42528) | 42528..43682 | + | 1155 | WP_064148474.1 | site-specific integrase | - |
| DRB04_RS28805 (43833) | 43833..44657 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| DRB04_RS28810 (44743) | 44743..45945 | + | 1203 | WP_064148458.1 | conjugal transfer protein TraF | - |
| DRB04_RS28815 (46005) | 46005..46589 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| DRB04_RS28820 (46984) | 46984..47442 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| DRB04_RS28825 (47439) | 47439..48257 | + | 819 | WP_064148460.1 | hypothetical protein | VF |
| DRB04_RS28830 (48254) | 48254..49402 | + | 1149 | WP_001024975.1 | putative protein YggR | VF |
| DRB04_RS28835 (49399) | 49399..49689 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| DRB04_RS28840 (49704) | 49704..50255 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| DRB04_RS28845 (50345) | 50345..54112 | + | 3768 | WP_064148461.1 | DUF5710 domain-containing protein | - |
| DRB04_RS28850 (54130) | 54130..54477 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| DRB04_RS28855 (54474) | 54474..55166 | + | 693 | WP_064148462.1 | DotI/IcmL family type IV secretion protein | - |
| DRB04_RS28860 (55177) | 55177..56160 | + | 984 | WP_064148463.1 | hypothetical protein | VF |
| DRB04_RS28865 (56163) | 56163..57452 | + | 1290 | WP_064148464.1 | conjugal transfer protein TraO | - |
| DRB04_RS28870 (57452) | 57452..58156 | + | 705 | WP_042012199.1 | IncI1-type conjugal transfer protein TraP | - |
| DRB04_RS28875 (58156) | 58156..58683 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| DRB04_RS28880 (58734) | 58734..59138 | + | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| DRB04_RS28885 (59202) | 59202..59390 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| DRB04_RS28890 (59374) | 59374..60174 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| DRB04_RS28895 (60264) | 60264..63308 | + | 3045 | WP_064148465.1 | IncI1-type conjugal transfer protein TraU | - |
| DRB04_RS28900 (63308) | 63308..63922 | + | 615 | WP_001542516.1 | IncI1-type conjugal transfer protein TraV | - |
| DRB04_RS28905 (63889) | 63889..65091 | + | 1203 | WP_064148466.1 | IncI1-type conjugal transfer protein TraW | - |
| DRB04_RS28910 (65120) | 65120..65704 | + | 585 | WP_117064814.1 | IncI1-type conjugal transfer protein TraX | - |
| DRB04_RS28915 (65801) | 65801..67969 | + | 2169 | WP_064148468.1 | DotA/TraY family protein | - |
| DRB04_RS28920 (68040) | 68040..68702 | + | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DRB04_RS28925 (68774) | 68774..68983 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| DRB04_RS28930 (69376) | 69376..69552 | + | 177 | WP_180335155.1 | hypothetical protein | - |
| - (70441) | 70441..70492 | + | 52 | NuclAT_1 | - | - |
| - (70441) | 70441..70492 | + | 52 | NuclAT_1 | - | - |
| - (70441) | 70441..70492 | + | 52 | NuclAT_1 | - | - |
| - (70441) | 70441..70492 | + | 52 | NuclAT_1 | - | - |
| DRB04_RS28935 (70885) | 70885..71136 | + | 252 | WP_001291962.1 | hypothetical protein | - |
| DRB04_RS28940 (71208) | 71208..71360 | - | 153 | WP_024179505.1 | Hok/Gef family protein | Toxin Detail |
| - (71412) | 71412..71472 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (71412) | 71412..71472 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (71412) | 71412..71472 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (71412) | 71412..71472 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| DRB04_RS28945 (71652) | 71652..72860 | + | 1209 | WP_064148469.1 | IncI1-type conjugal transfer protein TrbA | - |
| DRB04_RS28950 (72879) | 72879..73949 | + | 1071 | WP_064148470.1 | IncI1-type conjugal transfer protein TrbB | - |
| DRB04_RS28955 (73942) | 73942..76233 | + | 2292 | WP_077265944.1 | F-type conjugative transfer protein TrbC | - |
| DRB04_RS28960 (76270) | 76270..78969 | - | 2700 | WP_117064813.1 | Protein TraI | Relaxase |
| DRB04_RS28965 (78980) | 78980..79312 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| DRB04_RS28970 (79546) | 79546..79881 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DRB04_RS28975 (79967) | 79967..80815 | - | 849 | WP_117064812.1 | DUF4942 domain-containing protein | - |
| DRB04_RS28980 (81394) | 81394..81645 | + | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| DRB04_RS28985 (81676) | 81676..81921 | - | 246 | WP_001260884.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|