MGE detailed information
MGE type: Mobilizable plasmid MGE length: 92978 bp
Accession: NZ_CP030285 Location: 1..92978 Organism: Escherichia coli strain E308 Replicon: plasmid pLKSZ04
Accession: NZ_CP030285 Location: 1..92978 Organism: Escherichia coli strain E308 Replicon: plasmid pLKSZ04
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQW89_RS28005 () | 485..748 | + | 264 | WP_162883678.1 | hypothetical protein | - |
| DQW89_RS26985 () | 1137..1391 | + | 255 | WP_118394095.1 | hypothetical protein | - |
| DQW89_RS26990 () | 1604..2791 | - | 1188 | Protein_3 | IS91 family transposase IS1294 | Transposase |
| DQW89_RS26995 () | 2801..2989 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| DQW89_RS27000 () | 3235..3609 | + | 375 | WP_039022008.1 | hypothetical protein | - |
| DQW89_RS27005 () | 3591..4340 | + | 750 | WP_171841598.1 | hypothetical protein | - |
| DQW89_RS27010 () | 4461..4676 | + | 216 | WP_024259737.1 | hypothetical protein | - |
| DQW89_RS28010 () | 4850..4999 | - | 150 | WP_162883679.1 | hypothetical protein | - |
| DQW89_RS27015 () | 5469..5750 | + | 282 | WP_118394096.1 | DNA polymerase III subunit theta | - |
| DQW89_RS27020 () | 5728..6302 | - | 575 | Protein_10 | DNA-binding protein | - |
| DQW89_RS27025 () | 6477..6866 | + | 390 | WP_000506730.1 | DNA repair protein | - |
| DQW89_RS27030 () | 6939..7160 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DQW89_RS27035 () | 7160..7540 | + | 381 | WP_001216044.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DQW89_RS27040 () | 7545..7724 | + | 180 | WP_039022005.1 | hypothetical protein | - |
| DQW89_RS27045 () | 7752..8621 | + | 870 | Protein_15 | DUF968 domain-containing protein | - |
| DQW89_RS27050 () | 8796..9647 | - | 852 | WP_000611653.1 | hypothetical protein | - |
| DQW89_RS27055 () | 9758..9967 | - | 210 | WP_000874154.1 | hypothetical protein | - |
| DQW89_RS27070 () | 10158..10379 | + | 222 | Protein_18 | IS1 family transposase IS1A | Transposase |
| DQW89_RS27075 () | 10409..12160 | - | 1752 | Protein_19 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| DQW89_RS27080 () | 12149..12556 | + | 408 | WP_039022039.1 | cysteine hydrolase | - |
| DQW89_RS27085 () | 12694..13578 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| DQW89_RS27090 () | 13610..14809 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| DQW89_RS27095 () | 14915..15550 | + | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DQW89_RS27100 () | 15582..15824 | - | 243 | WP_000844627.1 | transposase | - |
| DQW89_RS27105 () | 15882..16676 | - | 795 | Protein_25 | Tn3 family transposase | - |
| DQW89_RS27110 () | 16739..17443 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DQW89_RS27120 () | 17565..18470 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| DQW89_RS27125 () | 18467..19705 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| DQW89_RS27130 () | 19705..20289 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| DQW89_RS27145 () | 20782..21546 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| DQW89_RS28015 () | 21664..21729 | - | 66 | Protein_31 | EAL domain-containing protein | - |
| DQW89_RS27155 () | 21773..22078 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| DQW89_RS27160 () | 22089..23294 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| DQW89_RS27165 () | 23450..23653 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| DQW89_RS27175 () | 23781..24620 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| DQW89_RS27180 () | 24614..24961 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| DQW89_RS27185 () | 25125..25916 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| DQW89_RS27190 () | 25922..26212 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| DQW89_RS27195 () | 26324..26821 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| DQW89_RS27200 () | 26966..27718 | + | 753 | Protein_40 | IS91 family transposase ISAzo26 | Transposase |
| DQW89_RS27205 () | 27772..28476 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DQW89_RS27210 () | 28539..29312 | + | 774 | Protein_42 | Methyl-accepting chemotaxis protein McpQ | VF |
| DQW89_RS27215 () | 29502..29986 | + | 485 | Protein_43 | IS1 family transposase | - |
| DQW89_RS27220 () | 30472..30693 | + | 222 | WP_000542336.1 | hypothetical protein | - |
| DQW89_RS27225 () | 30701..31732 | + | 1032 | WP_029393497.1 | site-specific integrase | - |
| DQW89_RS27230 () | 31884..32093 | + | 210 | WP_077249223.1 | lysogeny establishment protein | - |
| DQW89_RS27235 () | 32341..32901 | + | 561 | WP_039021622.1 | Ref family protein | - |
| DQW89_RS27240 () | 33090..33734 | + | 645 | WP_001514450.1 | hypothetical protein | - |
| DQW89_RS27245 () | 33788..34477 | - | 690 | WP_039021624.1 | EAL domain-containing protein | - |
| DQW89_RS27250 () | 34712..35422 | + | 711 | Protein_50 | helix-turn-helix domain-containing protein | - |
| DQW89_RS27255 () | 35461..35709 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| DQW89_RS27260 () | 35706..36146 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| DQW89_RS27265 () | 36180..38117 | - | 1938 | Protein_53 | helicase | - |
| DQW89_RS27270 () | 38265..39125 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| DQW89_RS27275 () | 39308..39865 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| DQW89_RS27280 () | 40029..43035 | + | 3007 | Protein_56 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DQW89_RS27285 () | 43071..45074 | - | 2004 | Protein_57 | helicase | - |
| DQW89_RS28020 () | 45431..45598 | + | 168 | WP_001352029.1 | hypothetical protein | - |
| DQW89_RS27295 () | 45685..45936 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DQW89_RS27300 () | 45933..46220 | + | 288 | WP_032206513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DQW89_RS27305 () | 46510..46710 | - | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| DQW89_RS27310 () | 46700..46905 | + | 206 | Protein_62 | hypothetical protein | - |
| DQW89_RS27315 () | 47080..50593 | - | 3514 | Protein_63 | Outer membrane protein IcsA autotransporter | VF |
| DQW89_RS27320 () | 51178..51423 | - | 246 | Protein_64 | IS91 family transposase | - |
| DQW89_RS27325 () | 51485..51961 | - | 477 | WP_077249222.1 | IS3 family transposase ISKpn38 | Transposase |
| DQW89_RS27330 () | 51962..52093 | - | 132 | WP_005020371.1 | hypothetical protein | - |
| DQW89_RS27335 () | 52062..53036 | - | 975 | WP_112921816.1 | IS3 family transposase ISKpn38 | Transposase |
| DQW89_RS27340 () | 53102..53999 | - | 898 | Protein_68 | IS3 family transposase ISEc31 | Transposase |
| DQW89_RS27345 () | 54009..55160 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| DQW89_RS27355 () | 55229..55486 | - | 258 | Protein_70 | IS3 family transposase ISEc52 | Transposase |
| DQW89_RS27360 () | 55555..56109 | - | 555 | Protein_71 | recombination-associated protein RdgC | - |
| DQW89_RS27365 () | 56102..56386 | - | 285 | WP_039021692.1 | hypothetical protein | - |
| DQW89_RS27375 () | 56730..57083 | + | 354 | WP_114142216.1 | hypothetical protein | - |
| DQW89_RS27380 () | 57123..57545 | + | 423 | WP_039021693.1 | hypothetical protein | - |
| DQW89_RS27385 () | 57721..58113 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| DQW89_RS27390 () | 58449..59333 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| DQW89_RS27395 () | 59624..60433 | + | 810 | WP_039021694.1 | GIY-YIG nuclease family protein | - |
| DQW89_RS27400 () | 60602..61798 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| DQW89_RS27405 () | 61815..62816 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| DQW89_RS27410 () | 63042..64748 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| DQW89_RS27415 () | 64808..66397 | + | 1590 | WP_032213770.1 | hypothetical protein | - |
| DQW89_RS27420 () | 66407..67222 | + | 816 | WP_000041769.1 | hypothetical protein | - |
| DQW89_RS27425 () | 67258..67839 | + | 582 | WP_072756830.1 | hypothetical protein | - |
| DQW89_RS27430 () | 67851..68360 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| DQW89_RS27435 () | 68520..69632 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| DQW89_RS27440 () | 69826..69981 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| DQW89_RS27445 () | 70379..70627 | + | 249 | Protein_87 | IS3 family transposase ISEhe3 | Transposase |
| DQW89_RS28155 () | 70637..70768 | - | 132 | Protein_88 | IS3 family transposase ISEhe3 | Transposase |
| DQW89_RS27455 () | 72196..72910 | + | 715 | Protein_90 | IS3 family transposase | - |
| DQW89_RS27460 () | 73308..74005 | + | 698 | Protein_91 | IS1 family transposase IS1D | Transposase |
| DQW89_RS27465 () | 74162..75034 | - | 873 | WP_000794337.1 | hypothetical protein | - |
| DQW89_RS27470 () | 75210..75674 | - | 465 | WP_001352013.1 | helix-turn-helix domain-containing protein | - |
| DQW89_RS27480 () | 75817..76514 | - | 698 | Protein_94 | IS1 family transposase | - |
| DQW89_RS27495 () | 76809..76940 | - | 132 | Protein_95 | IS3 family transposase | - |
| DQW89_RS27500 () | 77222..78580 | + | 1359 | WP_063082219.1 | esterase-like activity of phytase family protein | - |
| DQW89_RS27505 () | 78819..79763 | - | 945 | Protein_97 | IS66 family transposase ISEc8 | Transposase |
| DQW89_RS27515 () | 79831..80046 | + | 216 | Protein_98 | IS3 family transposase IS911 | Transposase |
| DQW89_RS27520 () | 80090..80787 | - | 698 | Protein_99 | IS1 family transposase | - |
| DQW89_RS27525 () | 81107..81460 | + | 354 | WP_001638971.1 | hypothetical protein | - |
| DQW89_RS27535 () | 81511..82470 | + | 960 | WP_077249230.1 | IS5 family transposase IS903B | Transposase |
| DQW89_RS27540 () | 82521..83218 | + | 698 | Protein_102 | IS1 family transposase | - |
| DQW89_RS27545 () | 83234..83887 | - | 654 | Protein_103 | hypothetical protein | Relaxase |
| DQW89_RS27550 () | 83898..84620 | - | 723 | WP_039022034.1 | hypothetical protein | - |
| DQW89_RS27555 () | 84617..85102 | - | 486 | WP_000071636.1 | hypothetical protein | - |
| DQW89_RS27560 () | 85860..86658 | + | 799 | Protein_106 | trhR | - |
| DQW89_RS27565 () | 86661..86921 | + | 261 | Protein_107 | hypothetical protein | - |
| DQW89_RS27570 () | 86937..87634 | - | 698 | Protein_108 | IS1 family transposase | - |
| DQW89_RS27580 () | 87689..88384 | + | 696 | Protein_109 | IS30-like element IS30 family transposase | - |
| DQW89_RS27585 () | 88397..88654 | - | 258 | Protein_110 | IS3 family transposase ISEc52 | Transposase |
| DQW89_RS28160 () | 88729..88791 | + | 63 | Protein_111 | VRR-NUC domain-containing protein | - |
| DQW89_RS27595 () | 88785..89183 | + | 399 | Protein_112 | norphogenetic protein | - |
| DQW89_RS27600 () | 89180..89857 | + | 678 | WP_039022012.1 | metallophosphoesterase | - |
| DQW89_RS27605 () | 89854..90555 | + | 702 | WP_039022011.1 | hypothetical protein | - |
| DQW89_RS27615 () | 90857..92119 | + | 1263 | WP_000107689.1 | hypothetical protein | - |
| DQW89_RS27620 () | 92192..92698 | + | 507 | WP_001379122.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|