MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54448 bp
Accession: NZ_CP030222 Location: 1..54448 Organism: Salmonella enterica strain SA20021456 Replicon: plasmid pSA20021456.3
Accession: NZ_CP030222 Location: 1..54448 Organism: Salmonella enterica strain SA20021456 Replicon: plasmid pSA20021456.3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHC34_RS27455 () | 28..843 | + | 816 | WP_000206613.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CHC34_RS27460 () | 840..2180 | + | 1341 | WP_154808172.1 | TrbI/VirB10 family protein | - |
| CHC34_RS27465 () | 2308..2520 | + | 213 | WP_000772401.1 | hypothetical protein | - |
| CHC34_RS27470 () | 2525..3592 | + | 1068 | WP_154808173.1 | P-type DNA transfer ATPase VirB11 | - |
| CHC34_RS27925 () | 3600..3959 | + | 360 | Protein_5 | hypothetical protein | - |
| CHC34_RS27475 () | 3981..5570 | + | 1590 | WP_170245774.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CHC34_RS27480 () | 5668..5979 | + | 312 | WP_015062751.1 | IncN plasmid KikA protein | - |
| CHC34_RS27485 () | 6321..7001 | + | 681 | WP_001668756.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| CHC34_RS27490 () | 7114..8817 | + | 1704 | WP_154808174.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CHC34_RS27495 () | 8807..10195 | + | 1389 | WP_154808175.1 | type 4b pilus protein PilO2 | - |
| CHC34_RS27500 () | 10173..10631 | + | 459 | WP_000024175.1 | type IV pilus biogenesis protein PilP | - |
| CHC34_RS27505 () | 10646..12208 | + | 1563 | WP_116779474.1 | Flp pilus assembly complex ATPase component TadA | - |
| CHC34_RS27510 () | 12195..13259 | + | 1065 | WP_154808176.1 | type II secretion system F family protein | - |
| CHC34_RS27515 () | 13325..13837 | + | 513 | WP_154808177.1 | conjugal transfer protein | - |
| CHC34_RS27520 () | 13895..14833 | + | 939 | WP_116779472.1 | Flp pilus assembly complex ATPase component TadA | - |
| CHC34_RS27525 () | 14849..16120 | + | 1272 | WP_154808178.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CHC34_RS27530 () | 16195..16614 | + | 420 | WP_154808179.1 | type IV pilus biogenesis protein PilM | - |
| CHC34_RS27535 () | 16617..17237 | + | 621 | WP_154808180.1 | prepilin peptidase | - |
| CHC34_RS27540 () | 17234..17725 | + | 492 | WP_154808181.1 | lytic transglycosylase domain-containing protein | - |
| CHC34_RS27545 () | 18077..18385 | + | 309 | Protein_20 | hypothetical protein | - |
| CHC34_RS27550 () | 18417..18950 | + | 534 | WP_154808182.1 | hypothetical protein | - |
| CHC34_RS27555 () | 18958..19221 | + | 264 | WP_116779466.1 | PilI type IV pilus biogenesis protein | - |
| CHC34_RS27560 () | 19278..19820 | + | 543 | WP_154808183.1 | single-stranded DNA-binding protein | - |
| CHC34_RS27565 () | 19885..22170 | + | 2286 | WP_154808184.1 | type IA DNA topoisomerase | - |
| CHC34_RS27570 () | 22519..22701 | + | 183 | WP_000833472.1 | type II toxin-antitoxin system HicA family toxin | - |
| CHC34_RS27575 () | 22726..23163 | + | 438 | WP_000466316.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CHC34_RS27580 () | 23482..23910 | + | 429 | WP_154808185.1 | hypothetical protein | - |
| CHC34_RS27585 () | 23907..24614 | + | 708 | WP_154808186.1 | transcriptional regulator | - |
| CHC34_RS27590 () | 24622..25299 | + | 678 | WP_023233707.1 | hypothetical protein | - |
| CHC34_RS27595 () | 25645..25995 | + | 351 | WP_001293490.1 | hypothetical protein | - |
| CHC34_RS27600 () | 25985..29677 | + | 3693 | WP_154808187.1 | relaxase | - |
| CHC34_RS27605 () | 29915..30175 | + | 261 | WP_023233709.1 | replication regulatory protein RepA | - |
| CHC34_RS27610 () | 30536..31369 | + | 834 | WP_154808194.1 | replication initiation protein | - |
| CHC34_RS27615 () | 32566..33081 | + | 516 | WP_154808188.1 | J domain-containing protein | - |
| CHC34_RS27620 () | 33235..33777 | + | 543 | WP_116779501.1 | hypothetical protein | - |
| CHC34_RS27625 () | 33774..34031 | + | 258 | WP_116779500.1 | hypothetical protein | Toxin Detail |
| CHC34_RS27630 () | 34018..34242 | + | 225 | WP_116779499.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CHC34_RS27635 () | 34637..34966 | + | 330 | WP_116779494.1 | hypothetical protein | - |
| CHC34_RS27930 () | 35043..35180 | + | 138 | WP_196214743.1 | hypothetical protein | - |
| CHC34_RS27640 () | 35791..36147 | + | 357 | WP_116779493.1 | hypothetical protein | - |
| CHC34_RS27645 () | 36356..37396 | - | 1041 | WP_154808189.1 | IS481 family transposase | - |
| CHC34_RS27650 () | 37527..38444 | - | 918 | WP_116779492.1 | DNA-binding protein | - |
| CHC34_RS27655 () | 39058..39822 | + | 765 | WP_116779491.1 | tyrosine-type recombinase/integrase | - |
| CHC34_RS27660 () | 39936..40601 | + | 666 | WP_116779490.1 | peptidyl-arginine deiminase | - |
| CHC34_RS27665 () | 40641..40961 | + | 321 | WP_116779489.1 | hypothetical protein | - |
| CHC34_RS27670 () | 41464..41718 | - | 255 | WP_154808195.1 | hypothetical protein | - |
| CHC34_RS27675 () | 41874..42104 | - | 231 | WP_154808190.1 | hypothetical protein | - |
| CHC34_RS27680 () | 42109..42396 | - | 288 | WP_154808191.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CHC34_RS27685 () | 42393..42644 | - | 252 | WP_154808192.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CHC34_RS27690 () | 42769..43059 | - | 291 | WP_154808193.1 | hypothetical protein | - |
| CHC34_RS27695 () | 43109..43537 | - | 429 | WP_023233714.1 | hypothetical protein | - |
| CHC34_RS27700 () | 43597..43884 | - | 288 | WP_023233715.1 | hypothetical protein | - |
| CHC34_RS27705 () | 44383..44874 | + | 492 | WP_023233716.1 | hypothetical protein | - |
| CHC34_RS27710 () | 44931..45386 | + | 456 | WP_001287806.1 | hypothetical protein | - |
| CHC34_RS27715 () | 45736..45987 | + | 252 | WP_000213776.1 | hypothetical protein | - |
| CHC34_RS27720 () | 46026..46724 | + | 699 | WP_015062745.1 | lytic transglycosylase domain-containing protein | - |
| CHC34_RS27725 () | 46699..47052 | + | 354 | WP_023233717.1 | hypothetical protein | - |
| CHC34_RS27730 () | 47052..47423 | + | 372 | WP_015062746.1 | VirB3 family type IV secretion system protein | - |
| CHC34_RS27735 () | 47380..49872 | + | 2493 | WP_001150380.1 | VirB4 family type IV secretion system protein | - |
| CHC34_RS27740 () | 50038..51114 | + | 1077 | WP_024148595.1 | Fic family protein | - |
| CHC34_RS27745 () | 51421..52104 | + | 684 | WP_088493143.1 | conjugal transfer protein | - |
| CHC34_RS27750 () | 52175..52522 | + | 348 | WP_088493142.1 | hypothetical protein | - |
| CHC34_RS27755 () | 52531..53472 | + | 942 | WP_116779480.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|