MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 134274 bp
Accession: NZ_CP030198 Location: 1..134274 Organism: Salmonella enterica strain SA20051401 Replicon: plasmid pSA20051401.2
Accession: NZ_CP030198 Location: 1..134274 Organism: Salmonella enterica strain SA20051401 Replicon: plasmid pSA20051401.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHD15_RS25915 () | 1286..2027 | - | 742 | Protein_1 | site-specific integrase | - |
| CHD15_RS25925 () | 2637..3566 | + | 930 | WP_000728916.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CHD15_RS25930 () | 4542..4775 | + | 234 | Protein_3 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CHD15_RS25935 () | 4926..5297 | - | 372 | WP_205318427.1 | tyrosine-type recombinase/integrase | - |
| CHD15_RS25940 () | 5983..7533 | + | 1551 | WP_079907949.1 | MchC protein | - |
| CHD15_RS25945 () | 7556..8029 | + | 474 | WP_000120460.1 | toxin-activating lysine-acyltransferase | - |
| CHD15_RS25950 () | 8134..9408 | + | 1275 | WP_176168257.1 | HlyD family secretion protein | - |
| CHD15_RS25955 () | 9383..11497 | + | 2115 | WP_114064531.1 | peptidase domain-containing ABC transporter | - |
| CHD15_RS27090 () | 11611..11763 | + | 153 | WP_001838496.1 | hypothetical protein | - |
| CHD15_RS25965 () | 12376..13070 | - | 695 | Protein_10 | CPBP family intramembrane metalloprotease | - |
| CHD15_RS25970 () | 13574..14351 | - | 778 | Protein_11 | phage integrase family protein | - |
| CHD15_RS25975 () | 14386..14830 | - | 445 | Protein_12 | hypothetical protein | - |
| CHD15_RS25980 () | 14827..15117 | - | 291 | WP_114064532.1 | cytoplasmic protein | - |
| CHD15_RS25985 () | 15119..15424 | - | 306 | WP_114064533.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CHD15_RS25990 () | 15426..15644 | - | 219 | WP_031570335.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CHD15_RS25995 () | 16388..16618 | + | 231 | WP_114064534.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CHD15_RS26000 () | 16615..17031 | + | 417 | WP_114064535.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CHD15_RS26005 () | 17247..17428 | - | 182 | Protein_18 | hypothetical protein | - |
| CHD15_RS26015 () | 18000..19019 | + | 1020 | WP_114064537.1 | hypothetical protein | - |
| CHD15_RS26020 () | 19356..19676 | + | 321 | WP_114064538.1 | hypothetical protein | - |
| CHD15_RS26025 () | 19808..20710 | + | 903 | WP_114064539.1 | hypothetical protein | - |
| CHD15_RS26920 () | 21095..21697 | - | 603 | WP_162785958.1 | hypothetical protein | - |
| CHD15_RS26045 () | 22569..23009 | - | 441 | WP_114064542.1 | universal stress protein | - |
| CHD15_RS26050 () | 23743..24933 | - | 1191 | WP_162785959.1 | hypothetical protein | - |
| CHD15_RS26060 () | 25586..25906 | + | 321 | WP_114064545.1 | LuxR family transcriptional regulator | - |
| CHD15_RS26925 () | 26161..26931 | + | 771 | WP_162785960.1 | hypothetical protein | - |
| CHD15_RS26070 () | 27917..28168 | + | 252 | WP_114064547.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
| CHD15_RS26075 () | 28165..28482 | + | 318 | Protein_28 | Txe/YoeB family addiction module toxin | - |
| CHD15_RS26080 () | 28559..28972 | - | 414 | WP_114064548.1 | type III secretion system chaperone | - |
| CHD15_RS26085 () | 28960..29439 | - | 480 | WP_044126994.1 | type III secretion system chaperone | - |
| CHD15_RS26090 () | 29449..30594 | - | 1146 | WP_114064549.1 | hypothetical protein | - |
| CHD15_RS26095 () | 30986..31699 | - | 714 | WP_114064550.1 | hypothetical protein | - |
| CHD15_RS26100 () | 32611..32955 | + | 345 | WP_114064551.1 | hypothetical protein | - |
| CHD15_RS26105 () | 33085..33549 | - | 465 | WP_162785961.1 | hypothetical protein | - |
| CHD15_RS26110 () | 34031..34435 | - | 405 | WP_162785962.1 | hypothetical protein | - |
| CHD15_RS26115 () | 34655..35038 | - | 384 | WP_114064554.1 | chaperone SicP | - |
| CHD15_RS26120 () | 35096..36754 | - | 1659 | WP_114064555.1 | hypothetical protein | - |
| CHD15_RS26125 () | 36952..37854 | - | 903 | WP_114064483.1 | hypothetical protein | - |
| CHD15_RS26130 () | 37946..38644 | - | 699 | WP_114064482.1 | hypothetical protein | - |
| CHD15_RS26135 () | 38583..39179 | - | 597 | WP_080171848.1 | hypothetical protein | - |
| CHD15_RS26140 () | 39172..39924 | - | 753 | WP_114064481.1 | EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein | - |
| CHD15_RS26145 () | 39921..40220 | - | 300 | WP_049828546.1 | type III secretion system inner rod subunit SctI | - |
| CHD15_RS26150 () | 40239..40487 | - | 249 | WP_031570197.1 | type III secretion system needle complex protein | - |
| CHD15_RS26155 () | 40506..41687 | - | 1182 | WP_052429261.1 | PrgH/EprH family type III secretion apparatus protein | - |
| CHD15_RS26160 () | 41768..42751 | - | 984 | WP_031615763.1 | type III secretion system needle tip protein SctA | - |
| CHD15_RS26165 () | 42810..43793 | - | 984 | WP_114064525.1 | type III secretion system translocon subunit SctB | - |
| CHD15_RS26170 () | 43823..45550 | - | 1728 | WP_114064480.1 | type III secretion system translocon subunit SctE | - |
| CHD15_RS26175 () | 45543..46043 | - | 501 | WP_044128150.1 | type III secretion system translocator chaperone SicA | - |
| CHD15_RS26180 () | 46094..47182 | - | 1089 | WP_058108441.1 | EscU/YscU/HrcU family type III secretion system export apparatus switch protein | - |
| CHD15_RS26185 () | 47189..47962 | - | 774 | WP_031570179.1 | SpaR/YscT/HrcT type III secretion system export apparatus protein | - |
| CHD15_RS26190 () | 47967..48227 | - | 261 | WP_031570176.1 | EscS/YscS/HrcS family type III secretion system export apparatus protein | - |
| CHD15_RS26195 () | 48258..48923 | - | 666 | WP_114064479.1 | EscR/YscR/HrcR family type III secretion system export apparatus protein | - |
| CHD15_RS26200 () | 48913..49812 | - | 900 | WP_114064478.1 | YscQ/HrcQ family type III secretion apparatus protein | - |
| CHD15_RS26205 () | 49812..50639 | - | 828 | WP_114064477.1 | hypothetical protein | - |
| CHD15_RS26210 () | 50608..51075 | - | 468 | WP_044126676.1 | hypothetical protein | - |
| CHD15_RS26215 () | 51059..52351 | - | 1293 | WP_044126678.1 | type III secretion system ATPase SctN | - |
| CHD15_RS26220 () | 52388..54454 | - | 2067 | WP_114064476.1 | EscV/YscV/HrcV family type III secretion system export apparatus protein | - |
| CHD15_RS26225 () | 54448..55578 | - | 1131 | WP_114064475.1 | type III secretion system gatekeeper subunit SctW | - |
| CHD15_RS26230 () | 55568..57277 | - | 1710 | WP_058108437.1 | type III secretion system outer membrane ring subunit SctC | - |
| CHD15_RS26235 () | 57541..57774 | - | 234 | WP_044127709.1 | hypothetical protein | - |
| CHD15_RS26240 () | 57970..58542 | - | 573 | Protein_61 | hypothetical protein | - |
| CHD15_RS26245 () | 58654..59373 | - | 720 | WP_114064556.1 | fimbrial protein | - |
| CHD15_RS26250 () | 59456..59677 | - | 222 | Protein_63 | hypothetical protein | - |
| CHD15_RS26255 () | 59664..60428 | - | 765 | WP_114064557.1 | fimbrial protein | - |
| CHD15_RS26260 () | 60455..61252 | - | 798 | WP_114064558.1 | F4 (K88) fimbria minor subunit FaeH | - |
| CHD15_RS26265 () | 61488..62285 | - | 798 | WP_114064559.1 | hypothetical protein | - |
| CHD15_RS26270 () | 62519..63013 | - | 495 | WP_114064560.1 | DUF5462 family protein | - |
| CHD15_RS26275 () | 63041..63764 | - | 724 | Protein_68 | fimbria/pilus periplasmic chaperone | - |
| CHD15_RS26280 () | 63848..66296 | - | 2449 | Protein_69 | F4 (K88) fimbrial usher FaeD | - |
| CHD15_RS26285 () | 66305..66841 | - | 537 | WP_114064561.1 | fimbrial protein | - |
| CHD15_RS26290 () | 66880..67185 | - | 306 | WP_114064562.1 | adhesin biosynthesis transcription regulatory family protein | - |
| CHD15_RS26930 () | 68547..68762 | + | 216 | WP_162785955.1 | hypothetical protein | - |
| CHD15_RS26300 () | 68732..69601 | - | 870 | WP_114064564.1 | YjiK family protein | - |
| CHD15_RS26305 () | 70629..71096 | - | 468 | WP_114064565.1 | hypothetical protein | - |
| CHD15_RS26315 () | 71984..72817 | - | 834 | WP_114064566.1 | replication initiation protein | - |
| CHD15_RS26320 () | 72846..72920 | - | 75 | WP_071786570.1 | RepA leader peptide Tap | - |
| CHD15_RS26325 () | 73157..73414 | - | 258 | WP_079975184.1 | replication regulatory protein RepA | - |
| CHD15_RS26330 () | 73540..74085 | - | 546 | WP_114064567.1 | phospholipase D family protein | - |
| CHD15_RS26935 () | 75248..76075 | - | 828 | Protein_79 | thioredoxin domain-containing protein | - |
| CHD15_RS26345 () | 76372..76590 | - | 219 | WP_114064568.1 | DUF465 domain-containing protein | - |
| CHD15_RS26350 () | 76699..76905 | - | 207 | WP_000838014.1 | hemolysin expression modulator Hha | - |
| CHD15_RS26355 () | 77057..77323 | - | 267 | WP_114064569.1 | hypothetical protein | - |
| CHD15_RS26360 () | 77524..77748 | + | 225 | WP_114064570.1 | hypothetical protein | - |
| CHD15_RS26370 () | 78013..78576 | - | 564 | WP_114064571.1 | fertility inhibition protein FinO | - |
| CHD15_RS26375 () | 78630..79370 | - | 741 | WP_114064572.1 | conjugal transfer pilus acetylase TraX | - |
| CHD15_RS26380 () | 79390..84648 | - | 5259 | WP_114064573.1 | conjugative transfer relaxase/helicase TraI | - |
| CHD15_RS26385 () | 84648..86891 | - | 2244 | WP_114064574.1 | type IV conjugative transfer system coupling protein TraD | - |
| CHD15_RS26390 () | 87267..87998 | - | 732 | WP_114064575.1 | complement resistance protein TraT | - |
| CHD15_RS26395 () | 88311..88793 | - | 483 | WP_114064576.1 | surface exclusion protein | - |
| CHD15_RS26400 () | 88815..91637 | - | 2823 | WP_114064577.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CHD15_RS26405 () | 91634..93016 | - | 1383 | WP_001161720.1 | conjugal transfer protein TraH | - |
| CHD15_RS26410 () | 93006..93554 | - | 549 | WP_094882718.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CHD15_RS26415 () | 93541..93834 | - | 294 | WP_053253523.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CHD15_RS26420 () | 94048..94797 | - | 750 | WP_114064578.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CHD15_RS26425 () | 94809..95024 | - | 216 | WP_053253599.1 | conjugal transfer protein TrbE | - |
| CHD15_RS26430 () | 95035..96861 | - | 1827 | WP_114064579.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CHD15_RS26435 () | 96858..97277 | - | 420 | WP_021003392.1 | HNH endonuclease | - |
| CHD15_RS26440 () | 97314..97952 | - | 639 | WP_053253597.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CHD15_RS26445 () | 97937..98245 | - | 309 | WP_114064580.1 | hypothetical protein | - |
| CHD15_RS26450 () | 98264..99256 | - | 993 | WP_114064581.1 | conjugal transfer pilus assembly protein TraU | - |
| CHD15_RS26455 () | 99253..99885 | - | 633 | WP_053253595.1 | type-F conjugative transfer system protein TraW | - |
| CHD15_RS26460 () | 99882..100268 | - | 387 | WP_053253594.1 | type-F conjugative transfer system protein TrbI | - |
| CHD15_RS26465 () | 100243..102891 | - | 2649 | WP_114064582.1 | type IV secretion system protein TraC | - |
| CHD15_RS26470 () | 102907..103290 | - | 384 | WP_042827805.1 | hypothetical protein | - |
| CHD15_RS26475 () | 103287..103754 | - | 468 | WP_114064583.1 | hypothetical protein | - |
| CHD15_RS26480 () | 103747..103968 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| CHD15_RS26485 () | 104103..104618 | - | 516 | WP_001015676.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CHD15_RS26490 () | 104615..104839 | - | 225 | WP_001746950.1 | DUF2689 domain-containing protein | - |
| CHD15_RS26495 () | 104817..105413 | - | 597 | WP_114064584.1 | conjugal transfer protein TraP | - |
| CHD15_RS26500 () | 105403..106824 | - | 1422 | WP_114064585.1 | conjugal transfer protein TraB | - |
| CHD15_RS26505 () | 106824..107564 | - | 741 | WP_114064586.1 | type-F conjugative transfer system secretin TraK | - |
| CHD15_RS26510 () | 107551..108117 | - | 567 | WP_053253589.1 | type IV conjugative transfer system protein TraE | - |
| CHD15_RS26515 () | 108139..108450 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| CHD15_RS26520 () | 108465..108827 | - | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| CHD15_RS26525 () | 108869..109096 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| CHD15_RS26530 () | 109190..109876 | - | 687 | WP_114064587.1 | PAS domain-containing protein | - |
| CHD15_RS26535 () | 110070..110450 | - | 381 | WP_053253587.1 | relaxosome protein TraM | - |
| CHD15_RS26545 () | 110866..111336 | + | 471 | WP_042828200.1 | transglycosylase SLT domain-containing protein | - |
| CHD15_RS27095 () | 111647..112465 | - | 819 | Protein_119 | DUF945 domain-containing protein | - |
| CHD15_RS26950 () | 112568..112726 | - | 159 | WP_162785956.1 | hypothetical protein | - |
| CHD15_RS26555 () | 112975..113712 | - | 738 | WP_114064588.1 | plasmid SOS inhibition protein A | - |
| CHD15_RS26560 () | 113709..114143 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| CHD15_RS26565 () | 114183..116180 | - | 1998 | WP_114064589.1 | ParB/RepB/Spo0J family partition protein | - |
| CHD15_RS26570 () | 116249..116491 | - | 243 | WP_114064590.1 | DUF905 domain-containing protein | - |
| CHD15_RS26575 () | 116546..117064 | - | 519 | WP_053253582.1 | single-stranded DNA-binding protein SSB2 | - |
| CHD15_RS26595 () | 117765..118088 | - | 324 | WP_053253581.1 | DNA polymerase III subunit theta | - |
| CHD15_RS26600 () | 118324..118758 | - | 435 | WP_114064592.1 | DUF1380 family protein | - |
| CHD15_RS26605 () | 118825..119259 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| CHD15_RS26615 () | 119747..120511 | - | 765 | WP_001747302.1 | hypothetical protein | - |
| CHD15_RS26620 () | 120583..120996 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| CHD15_RS26625 () | 121052..121273 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| CHD15_RS26630 () | 121273..121953 | - | 681 | WP_114064593.1 | DNA methylase | - |
| CHD15_RS26635 () | 122334..122690 | - | 357 | WP_114064594.1 | hypothetical protein | - |
| CHD15_RS26640 () | 122683..123153 | - | 471 | WP_077944255.1 | hypothetical protein | - |
| CHD15_RS26645 () | 123664..124086 | + | 423 | WP_044127552.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CHD15_RS26650 () | 124086..125360 | + | 1275 | WP_114064595.1 | Y-family DNA polymerase | - |
| CHD15_RS26655 () | 125442..126416 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| CHD15_RS26660 () | 126416..127621 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| CHD15_RS26665 () | 127863..128759 | + | 897 | Protein_139 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CHD15_RS26670 () | 128910..129692 | - | 783 | WP_114064596.1 | site-specific integrase | - |
| CHD15_RS26675 () | 129727..130248 | - | 522 | WP_114064597.1 | cytoplasmic protein | - |
| CHD15_RS26680 () | 130245..130475 | - | 231 | WP_114064598.1 | cytoplasmic protein | - |
| CHD15_RS26685 () | 131212..131556 | + | 345 | WP_114064599.1 | abortive infection protein | - |
| CHD15_RS26690 () | 131742..132738 | - | 997 | Protein_144 | DUF4238 domain-containing protein | - |
| CHD15_RS26695 () | 132869..133156 | - | 288 | WP_162785963.1 | hypothetical protein | - |
| CHD15_RS26705 () | 133513..133743 | + | 231 | WP_162785964.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|