MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 131435 bp
Accession: NZ_CP030177 Location: 1..131435 Organism: Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 Replicon: plasmid pIncFII.2
Accession: NZ_CP030177 Location: 1..131435 Organism: Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 Replicon: plasmid pIncFII.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ28_RS26460 () | 1..858 | + | 858 | WP_058108523.1 | incFII family plasmid replication initiator RepA | - |
| LFZ28_RS25585 () | 2060..2699 | + | 640 | Protein_2 | recombinase family protein | - |
| LFZ28_RS25590 () | 2974..4410 | + | 1437 | WP_058108524.1 | radical SAM protein | - |
| LFZ28_RS25595 () | 4580..4960 | + | 381 | Protein_4 | resolvase | - |
| LFZ28_RS25605 () | 5464..6123 | + | 660 | Protein_5 | transposase | - |
| LFZ28_RS25610 () | 6305..6961 | - | 657 | WP_058108525.1 | hypothetical protein | - |
| LFZ28_RS25615 () | 7760..7900 | + | 141 | Protein_7 | transposase | - |
| LFZ28_RS25620 () | 8126..9142 | - | 1017 | WP_058108526.1 | IS110 family transposase | - |
| LFZ28_RS25625 () | 9209..9885 | + | 677 | Protein_9 | IS3 family transposase | - |
| LFZ28_RS25630 () | 9951..10668 | - | 718 | Protein_10 | transposase | - |
| LFZ28_RS26575 () | 10675..10901 | + | 227 | Protein_11 | hypothetical protein | - |
| LFZ28_RS25645 () | 11200..11392 | - | 193 | Protein_12 | transposase | - |
| LFZ28_RS25650 () | 11593..12545 | - | 953 | Protein_13 | IS3 family transposase | - |
| LFZ28_RS25655 () | 13412..13747 | + | 336 | WP_073998967.1 | adhesin biosynthesis transcription regulatory family protein | - |
| LFZ28_RS25660 () | 13744..14277 | + | 534 | WP_058108529.1 | fimbrial protein | - |
| LFZ28_RS25665 () | 14286..16736 | + | 2451 | WP_058108530.1 | F4 (K88) fimbrial usher FaeD | - |
| LFZ28_RS25670 () | 16759..17547 | + | 789 | WP_058108539.1 | fimbria/pilus periplasmic chaperone | - |
| LFZ28_RS25675 () | 17575..18069 | + | 495 | WP_044128321.1 | DUF5462 family protein | - |
| LFZ28_RS25680 () | 18305..19075 | + | 771 | WP_058108531.1 | hypothetical protein | - |
| LFZ28_RS25685 () | 19311..20108 | + | 798 | WP_058108532.1 | F4 (K88) fimbria minor subunit FaeH | - |
| LFZ28_RS25690 () | 20139..20906 | + | 768 | WP_058108533.1 | fimbrial protein | - |
| LFZ28_RS25695 () | 20893..21114 | + | 222 | Protein_22 | hypothetical protein | - |
| LFZ28_RS25700 () | 21197..21916 | + | 720 | WP_058108433.1 | F4 (K88) fimbria accessory protein FaeJ | - |
| LFZ28_RS25705 () | 22028..22600 | + | 573 | Protein_24 | hypothetical protein | - |
| LFZ28_RS25710 () | 22797..23030 | + | 234 | WP_044127709.1 | hypothetical protein | - |
| LFZ28_RS25715 () | 23293..25002 | + | 1710 | WP_058108437.1 | type III secretion system outer membrane ring subunit SctC | - |
| LFZ28_RS25720 () | 24992..26122 | + | 1131 | WP_077917404.1 | type III secretion system gatekeeper subunit SctW | - |
| LFZ28_RS25725 () | 26116..28182 | + | 2067 | WP_058108856.1 | EscV/YscV/HrcV family type III secretion system export apparatus protein | - |
| LFZ28_RS25730 () | 28219..29511 | + | 1293 | WP_044126678.1 | type III secretion system ATPase SctN | - |
| LFZ28_RS25735 () | 29495..29962 | + | 468 | WP_044126676.1 | hypothetical protein | - |
| LFZ28_RS25740 () | 29931..30758 | + | 828 | WP_058108439.1 | hypothetical protein | - |
| LFZ28_RS25745 () | 30758..31657 | + | 900 | WP_058108440.1 | YscQ/HrcQ family type III secretion apparatus protein | - |
| LFZ28_RS25750 () | 31647..32312 | + | 666 | WP_044128154.1 | EscR/YscR/HrcR family type III secretion system export apparatus protein | - |
| LFZ28_RS25755 () | 32343..32603 | + | 261 | WP_031570176.1 | EscS/YscS/HrcS family type III secretion system export apparatus protein | - |
| LFZ28_RS25760 () | 32608..33381 | + | 774 | WP_044128152.1 | SpaR/YscT/HrcT type III secretion system export apparatus protein | - |
| LFZ28_RS25765 () | 33388..34476 | + | 1089 | WP_058108441.1 | EscU/YscU/HrcU family type III secretion system export apparatus switch protein | - |
| LFZ28_RS25770 () | 34527..35027 | + | 501 | WP_044128150.1 | type III secretion system translocator chaperone SicA | - |
| LFZ28_RS25775 () | 35020..36747 | + | 1728 | WP_058108442.1 | type III secretion system translocon subunit SctE | - |
| LFZ28_RS25780 () | 36777..37760 | + | 984 | WP_072010165.1 | type III secretion system translocon subunit SctB | - |
| LFZ28_RS25785 () | 37819..38802 | + | 984 | WP_058108443.1 | type III secretion system needle tip protein SctA | - |
| LFZ28_RS25790 () | 38883..40064 | + | 1182 | WP_058108444.1 | PrgH/EprH family type III secretion apparatus protein | - |
| LFZ28_RS25795 () | 40083..40331 | + | 249 | WP_031570197.1 | type III secretion system needle complex protein | - |
| LFZ28_RS25800 () | 40350..40649 | + | 300 | WP_049828546.1 | type III secretion system inner rod subunit SctI | - |
| LFZ28_RS25805 () | 40646..41398 | + | 753 | WP_058108445.1 | EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein | - |
| LFZ28_RS25810 () | 41391..41987 | + | 597 | WP_065336643.1 | hypothetical protein | - |
| LFZ28_RS25815 () | 41926..42624 | + | 699 | WP_058108446.1 | hypothetical protein | - |
| LFZ28_RS25820 () | 42715..43629 | + | 915 | WP_058108447.1 | hypothetical protein | - |
| LFZ28_RS25825 () | 43826..45475 | + | 1650 | WP_058108448.1 | hypothetical protein | - |
| LFZ28_RS25830 () | 45533..45919 | + | 387 | WP_058108449.1 | chaperone SicP | - |
| LFZ28_RS25835 () | 46052..46657 | + | 606 | WP_058108450.1 | hypothetical protein | - |
| LFZ28_RS25840 () | 46845..47189 | - | 345 | WP_058108451.1 | hypothetical protein | - |
| LFZ28_RS25845 () | 47946..48863 | + | 918 | WP_058108452.1 | hypothetical protein | - |
| LFZ28_RS25850 () | 48986..49837 | + | 852 | WP_162802314.1 | hypothetical protein | - |
| LFZ28_RS25855 () | 49862..51007 | + | 1146 | WP_058108454.1 | hypothetical protein | - |
| LFZ28_RS25860 () | 51017..51496 | + | 480 | WP_058108455.1 | type III secretion system chaperone | - |
| LFZ28_RS25865 () | 51484..51897 | + | 414 | WP_058108456.1 | type III secretion system chaperone | - |
| LFZ28_RS25870 () | 52046..52300 | - | 255 | WP_058108457.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LFZ28_RS25875 () | 52297..52548 | - | 252 | WP_058108458.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| LFZ28_RS25880 () | 52808..53158 | - | 351 | WP_058108459.1 | hypothetical protein | - |
| LFZ28_RS25890 () | 55143..55583 | + | 441 | WP_058108461.1 | universal stress protein | - |
| LFZ28_RS26465 () | 56511..57104 | + | 594 | WP_162802315.1 | hypothetical protein | - |
| LFZ28_RS25905 () | 57544..58563 | - | 1020 | WP_114159194.1 | hypothetical protein | - |
| LFZ28_RS25915 () | 59473..60204 | - | 732 | WP_058108469.1 | type III secretion system effector phosphothreonine lyase | - |
| LFZ28_RS25920 () | 60279..60527 | - | 249 | Protein_64 | hypothetical protein | - |
| LFZ28_RS25930 () | 61187..61615 | - | 429 | WP_058108470.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFZ28_RS25935 () | 61612..61842 | - | 231 | WP_058108471.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LFZ28_RS25945 () | 62388..63350 | + | 963 | WP_058108472.1 | hypothetical protein | - |
| LFZ28_RS25950 () | 63351..63641 | + | 291 | WP_058108851.1 | hypothetical protein | - |
| LFZ28_RS25955 () | 63638..64137 | + | 500 | Protein_69 | cytoplasmic protein | - |
| LFZ28_RS25960 () | 64134..64916 | + | 783 | WP_058108850.1 | site-specific integrase | - |
| LFZ28_RS25965 () | 65131..65994 | - | 864 | WP_000074442.1 | RepB family plasmid replication initiator protein | - |
| LFZ28_RS25970 () | 66532..67173 | + | 642 | WP_000511282.1 | ParA family protein | - |
| LFZ28_RS25975 () | 67265..67603 | + | 339 | WP_024136783.1 | hypothetical protein | - |
| LFZ28_RS25980 () | 67818..68858 | - | 1041 | Protein_74 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LFZ28_RS25985 () | 68947..71082 | - | 2136 | WP_058108192.1 | tyrosine-type recombinase/integrase | - |
| LFZ28_RS25990 () | 71093..72040 | - | 948 | WP_114159163.1 | site-specific integrase | - |
| LFZ28_RS25995 () | 72143..72370 | - | 228 | Protein_77 | DNA polymerase V subunit UmuC | - |
| LFZ28_RS26000 () | 72354..72785 | - | 432 | WP_058108381.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LFZ28_RS26005 () | 73088..74056 | + | 969 | WP_024134920.1 | plasmid segregation protein parM | - |
| LFZ28_RS26010 () | 74059..74703 | + | 645 | WP_058108382.1 | ABC transporter | - |
| LFZ28_RS26015 () | 74790..75131 | + | 342 | WP_077950175.1 | hypothetical protein | - |
| LFZ28_RS26020 () | 75567..76475 | + | 909 | WP_201264604.1 | DUF1281 domain-containing protein | - |
| LFZ28_RS26470 () | 76511..76666 | + | 156 | WP_162785943.1 | hypothetical protein | - |
| LFZ28_RS26025 () | 76659..77009 | + | 351 | WP_000063343.1 | hypothetical protein | - |
| LFZ28_RS26030 () | 77342..78274 | + | 933 | WP_058108385.1 | IS110 family transposase | - |
| LFZ28_RS26040 () | 79103..80803 | - | 1701 | WP_058108386.1 | group II intron reverse transcriptase/maturase | - |
| LFZ28_RS26045 () | 81426..81872 | + | 447 | Protein_87 | DNA methylase | - |
| LFZ28_RS26055 () | 82378..82803 | + | 426 | WP_031570388.1 | antirestriction protein | - |
| LFZ28_RS26060 () | 82850..83308 | + | 459 | WP_058108855.1 | DUF1380 family protein | - |
| LFZ28_RS26065 () | 83263..83448 | + | 186 | WP_073999000.1 | hypothetical protein | - |
| LFZ28_RS26580 () | 83427..83927 | - | 501 | Protein_91 | hypothetical protein | - |
| LFZ28_RS26080 () | 84442..84672 | + | 231 | WP_058108854.1 | hypothetical protein | - |
| LFZ28_RS26085 () | 84714..84947 | + | 234 | WP_031570398.1 | DUF905 domain-containing protein | - |
| LFZ28_RS26090 () | 85016..86974 | + | 1959 | Protein_94 | ParB/RepB/Spo0J family partition protein | - |
| LFZ28_RS26095 () | 87029..87463 | + | 435 | WP_058108853.1 | conjugation system SOS inhibitor PsiB | - |
| LFZ28_RS26100 () | 87460..88143 | + | 684 | Protein_96 | plasmid SOS inhibition protein A | - |
| LFZ28_RS26105 () | 88172..89743 | - | 1572 | WP_058108393.1 | IS66 family transposase | - |
| LFZ28_RS26110 () | 89763..90110 | - | 348 | WP_000624618.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LFZ28_RS26115 () | 90110..90760 | - | 651 | WP_058108392.1 | IS66 family insertion sequence hypothetical protein | - |
| LFZ28_RS26120 () | 91165..91326 | + | 162 | WP_031570426.1 | type I toxin-antitoxin system Hok family toxin | - |
| LFZ28_RS26585 () | 91622..91886 | - | 265 | Protein_101 | hypothetical protein | - |
| LFZ28_RS26135 () | 92204..92491 | + | 288 | WP_114159195.1 | hypothetical protein | - |
| LFZ28_RS26140 () | 92610..93431 | + | 822 | WP_162802316.1 | DUF945 domain-containing protein | - |
| LFZ28_RS26145 () | 93708..94160 | - | 453 | WP_058108535.1 | transglycosylase SLT domain-containing protein | - |
| LFZ28_RS26155 () | 94671..95066 | + | 396 | WP_001558305.1 | relaxosome protein TraM | - |
| LFZ28_RS26160 () | 95227..95991 | + | 765 | WP_058108499.1 | hypothetical protein | - |
| LFZ28_RS26165 () | 96131..96280 | + | 150 | WP_001401982.1 | TraY domain-containing protein | - |
| LFZ28_RS26170 () | 96578..96949 | + | 372 | WP_058108500.1 | conjugal transfer protein TraA | - |
| LFZ28_RS26175 () | 96980..97279 | + | 300 | WP_044127995.1 | type IV conjugative transfer system protein TraL | - |
| LFZ28_RS26180 () | 97290..97868 | + | 579 | WP_000365869.1 | type IV conjugative transfer system protein TraE | - |
| LFZ28_RS26185 () | 97843..98622 | + | 780 | WP_058108501.1 | type-F conjugative transfer system secretin TraK | - |
| LFZ28_RS26190 () | 98615..99949 | + | 1335 | WP_058108502.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LFZ28_RS26195 () | 99961..100473 | + | 513 | WP_058108503.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LFZ28_RS26200 () | 100470..103109 | + | 2640 | WP_058108504.1 | type IV secretion system protein TraC | - |
| LFZ28_RS26205 () | 103088..103507 | + | 420 | WP_073998963.1 | type-F conjugative transfer system protein TrbI | - |
| LFZ28_RS26210 () | 103510..103734 | + | 225 | WP_058108505.1 | TraR/DksA C4-type zinc finger protein | - |
| LFZ28_RS26215 () | 103731..104348 | + | 618 | WP_058108506.1 | type-F conjugative transfer system protein TraW | - |
| LFZ28_RS26220 () | 104345..105343 | + | 999 | WP_077950182.1 | conjugal transfer pilus assembly protein TraU | - |
| LFZ28_RS26475 () | 105709..106728 | - | 1020 | WP_162802317.1 | hypothetical protein | - |
| LFZ28_RS26230 () | 106865..107437 | + | 573 | WP_058108537.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LFZ28_RS26235 () | 107434..109254 | + | 1821 | WP_058108508.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LFZ28_RS26240 () | 109256..110041 | + | 786 | WP_058108509.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LFZ28_RS26245 () | 110059..110331 | + | 273 | WP_058108510.1 | hypothetical protein | - |
| LFZ28_RS26250 () | 110333..110926 | + | 594 | WP_058108511.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LFZ28_RS26255 () | 111001..111498 | + | 498 | WP_162802318.1 | hypothetical protein | - |
| LFZ28_RS26260 () | 111633..112010 | + | 378 | WP_000159734.1 | hypothetical protein | - |
| LFZ28_RS26265 () | 112074..113480 | + | 1407 | WP_058108513.1 | conjugal transfer protein TraH | - |
| LFZ28_RS26270 () | 113480..116389 | + | 2910 | WP_058108514.1 | conjugal transfer mating pair stabilization protein TraG | - |
| LFZ28_RS26275 () | 116404..117051 | + | 648 | WP_058108515.1 | hypothetical protein | - |
| LFZ28_RS26280 () | 117123..117860 | + | 738 | WP_058108516.1 | complement resistance protein TraT | - |
| LFZ28_RS26285 () | 118193..118696 | + | 504 | WP_058108517.1 | DUF2726 domain-containing protein | - |
| LFZ28_RS26290 () | 118734..120920 | + | 2187 | WP_058108518.1 | type IV conjugative transfer system coupling protein TraD | - |
| LFZ28_RS26295 () | 120920..126136 | + | 5217 | WP_058108519.1 | conjugative transfer relaxase/helicase TraI | - |
| LFZ28_RS26300 () | 126136..126894 | + | 759 | WP_058108520.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LFZ28_RS26305 () | 126969..127532 | + | 564 | WP_058108521.1 | fertility inhibition protein FinO | - |
| LFZ28_RS26310 () | 128166..128972 | + | 807 | WP_058108522.1 | hypothetical protein | - |
| LFZ28_RS26320 () | 129298..129504 | + | 207 | WP_073998966.1 | type I toxin-antitoxin system Hok family toxin | - |
| LFZ28_RS26325 () | 129834..130124 | + | 291 | WP_044128035.1 | DUF1778 domain-containing protein | - |
| LFZ28_RS26330 () | 130115..130597 | + | 483 | WP_044128037.1 | GNAT family N-acetyltransferase | - |
| LFZ28_RS26335 () | 130880..131137 | + | 258 | WP_044128039.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|