MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 29589 bp
Accession: NZ_CP030157 Location: 1..29589 Organism: Escherichia coli strain JSMCR1 Replicon: plasmid pJSMCR1_5
Accession: NZ_CP030157 Location: 1..29589 Organism: Escherichia coli strain JSMCR1 Replicon: plasmid pJSMCR1_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSMCR1_RS25795 (JSMCR1_p654) | 15..2762 | - | 2748 | WP_021548632.1 | Type IV secretion system protein virB4 | VF |
| JSMCR1_RS25800 (JSMCR1_p655) | 2781..3107 | - | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| JSMCR1_RS25805 (JSMCR1_p656) | 3121..3741 | - | 621 | WP_053911938.1 | Type IV secretion system protein virB1 | VF |
| JSMCR1_RS25810 (JSMCR1_p658) | 4097..4330 | - | 234 | WP_000121161.1 | EexN family lipoprotein | - |
| JSMCR1_RS25815 (JSMCR1_p659) | 4335..4601 | - | 267 | WP_000160395.1 | hypothetical protein | - |
| JSMCR1_RS25820 (JSMCR1_p660) | 4678..5907 | - | 1230 | WP_001694183.1 | hypothetical protein | Relaxase |
| JSMCR1_RS25825 (JSMCR1_p661) | 5919..6473 | - | 555 | WP_256625400.1 | DNA distortion polypeptide 1 | - |
| JSMCR1_RS25830 (JSMCR1_p664) | 6783..7130 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JSMCR1_RS25835 (JSMCR1_p665) | 7127..7375 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JSMCR1_RS25840 (JSMCR1_p667) | 7682..7987 | - | 306 | WP_072182957.1 | hypothetical protein | - |
| JSMCR1_RS25845 (JSMCR1_p668) | 8055..8327 | - | 273 | WP_001272373.1 | hypothetical protein | - |
| JSMCR1_RS25850 (JSMCR1_p669) | 8454..8774 | - | 321 | WP_224693477.1 | molecular chaperone DnaJ | - |
| JSMCR1_RS25855 (JSMCR1_p670) | 8776..9003 | - | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| JSMCR1_RS25860 (JSMCR1_p671) | 8990..9241 | - | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| JSMCR1_RS25865 (JSMCR1_p672) | 9238..9780 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| JSMCR1_RS25870 (JSMCR1_p673) | 9885..10400 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
| JSMCR1_RS25875 (JSMCR1_p677) | 11900..12682 | + | 783 | WP_256625401.1 | replication initiation protein | - |
| JSMCR1_RS25880 (JSMCR1_p678) | 12695..13099 | + | 405 | WP_000654311.1 | hypothetical protein | - |
| JSMCR1_RS25885 (JSMCR1_p680) | 13234..13761 | + | 528 | WP_000577044.1 | DUF2726 domain-containing protein | - |
| JSMCR1_RS25890 (JSMCR1_p681) | 14056..14271 | - | 216 | WP_000806548.1 | hypothetical protein | - |
| JSMCR1_RS25895 (JSMCR1_p682) | 14296..14565 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| JSMCR1_RS25900 (JSMCR1_p683) | 14640..15287 | - | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| JSMCR1_RS25905 (JSMCR1_p684) | 15908..16372 | - | 465 | WP_001293143.1 | H-NS family nucleoid-associated regulatory protein | - |
| JSMCR1_RS25910 (JSMCR1_p685) | 16388..16594 | - | 207 | WP_000850857.1 | hemolysin expression modulator Hha | - |
| JSMCR1_RS25915 (JSMCR1_p686) | 16591..18744 | - | 2154 | WP_053911937.1 | type IA DNA topoisomerase | - |
| JSMCR1_RS25920 (JSMCR1_p687) | 18749..19324 | - | 576 | WP_001198961.1 | hypothetical protein | - |
| JSMCR1_RS25925 (JSMCR1_p688) | 19432..19836 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| JSMCR1_RS25930 (JSMCR1_p689) | 19852..20346 | - | 495 | WP_001215680.1 | thermonuclease family protein | - |
| JSMCR1_RS25935 (JSMCR1_p690) | 20343..20651 | - | 309 | WP_000647576.1 | hypothetical protein | - |
| JSMCR1_RS25940 (JSMCR1_p691) | 20754..21008 | - | 255 | WP_000415096.1 | hypothetical protein | - |
| JSMCR1_RS25945 (JSMCR1_p692) | 21014..21319 | - | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| JSMCR1_RS25950 (JSMCR1_p693) | 21303..21725 | - | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| JSMCR1_RS25955 (JSMCR1_p694) | 21734..23596 | - | 1863 | WP_000847102.1 | relaxosome-coupling protein TaxB | - |
| JSMCR1_RS25960 (JSMCR1_p695) | 23668..24609 | - | 942 | WP_256625392.1 | Type IV secretion system protein VirB11 | VF |
| JSMCR1_RS25965 | 24611..25200 | - | 590 | Protein_35 | Type IV secretion system protein virB10 | VF |
| JSMCR1_RS25970 (JSMCR1_p698) | 25212..25619 | - | 408 | WP_256625393.1 | hypothetical protein | - |
| JSMCR1_RS25975 (JSMCR1_p700) | 25719..26048 | - | 330 | WP_256625394.1 | Type IV secretion system protein virB9 | VF |
| JSMCR1_RS25980 | 26098..26253 | - | 156 | WP_256625402.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| JSMCR1_RS25985 (JSMCR1_p702) | 26319..26522 | - | 204 | WP_256625395.1 | Type IV secretion system protein PtlF | VF |
| JSMCR1_RS25990 (JSMCR1_p703) | 26658..27161 | - | 504 | WP_256625403.1 | type IV secretion system protein | - |
| JSMCR1_RS25995 (JSMCR1_p706) | 27791..28414 | - | 624 | WP_256625396.1 | type IV secretion system protein | - |
| JSMCR1_RS26000 (JSMCR1_p707) | 28404..28868 | - | 465 | WP_256625397.1 | type IV secretion system protein | - |
| JSMCR1_RS26005 (JSMCR1_p709) | 28998..29219 | - | 222 | WP_256625398.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|