MGE detailed information
MGE type: Mobilizable plasmid MGE length: 61828 bp
Accession: NZ_CP030156 Location: 1..61828 Organism: Escherichia coli strain JSMCR1 Replicon: plasmid pJSMCR1_4
Accession: NZ_CP030156 Location: 1..61828 Organism: Escherichia coli strain JSMCR1 Replicon: plasmid pJSMCR1_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSMCR1_RS25395 (JSMCR1_p559) | 552..1322 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| JSMCR1_RS25400 (JSMCR1_p560) | 1319..2053 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| JSMCR1_RS25405 (JSMCR1_p561) | 2053..2187 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| JSMCR1_RS25410 (JSMCR1_p562) | 2219..4576 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| JSMCR1_RS25415 (JSMCR1_p563) | 4582..4902 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| JSMCR1_RS25420 (JSMCR1_p564) | 4973..5263 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| JSMCR1_RS25425 (JSMCR1_p565) | 5263..5847 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| JSMCR1_RS25430 (JSMCR1_p566) | 5868..6266 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| JSMCR1_RS25435 (JSMCR1_p567) | 6385..6822 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| JSMCR1_RS25440 (JSMCR1_p568) | 6828..8063 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| JSMCR1_RS25445 (JSMCR1_p569) | 8066..8365 | - | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| JSMCR1_RS25450 (JSMCR1_p570) | 8433..8714 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JSMCR1_RS25455 (JSMCR1_p571) | 8704..8955 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| JSMCR1_RS25460 (JSMCR1_p572) | 9055..9690 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| JSMCR1_RS25465 (JSMCR1_p573) | 9763..10050 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| JSMCR1_RS25470 (JSMCR1_p574) | 10063..10317 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| JSMCR1_RS25475 (JSMCR1_p575) | 10319..10960 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| JSMCR1_RS25480 (JSMCR1_p576) | 10966..11961 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| JSMCR1_RS25485 (JSMCR1_p577) | 11965..12222 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| JSMCR1_RS25490 (JSMCR1_p578) | 12219..12521 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| JSMCR1_RS25495 (JSMCR1_p579) | 12502..12759 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| JSMCR1_RS25500 (JSMCR1_p580) | 12792..13238 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| JSMCR1_RS25505 (JSMCR1_p581) | 13249..13419 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| JSMCR1_RS25510 (JSMCR1_p582) | 13423..13866 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| JSMCR1_RS25515 (JSMCR1_p583) | 14240..15193 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| JSMCR1_RS25520 (JSMCR1_p584) | 15220..15396 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| JSMCR1_RS25525 (JSMCR1_p585) | 15389..15604 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| JSMCR1_RS25530 (JSMCR1_p586) | 15597..16049 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| JSMCR1_RS25535 (JSMCR1_p588) | 17189..18217 | + | 1029 | WP_001175213.1 | plasmid replication initiator RepA | - |
| JSMCR1_RS25540 (JSMCR1_p590) | 18918..19108 | + | 191 | Protein_30 | hypothetical protein | - |
| JSMCR1_RS25545 | 19792..21161 | + | 1370 | WP_087522250.1 | IS3 family transposase IS150 | Transposase |
| JSMCR1_RS25550 (JSMCR1_p594) | 21204..21356 | + | 153 | Protein_32 | FlmC family protein | - |
| JSMCR1_RS25555 | 21304..21423 | + | 120 | WP_228932012.1 | Hok/Gef family protein | - |
| JSMCR1_RS25560 (JSMCR1_p595) | 21573..22169 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| JSMCR1_RS25565 (JSMCR1_p596) | 22187..22471 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| JSMCR1_RS25570 (JSMCR1_p597) | 22545..23210 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| JSMCR1_RS25575 (JSMCR1_p599) | 23808..24137 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| JSMCR1_RS25580 (JSMCR1_p600) | 24246..24392 | - | 147 | WP_001356709.1 | hypothetical protein | - |
| JSMCR1_RS25585 (JSMCR1_p602) | 24719..25042 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| JSMCR1_RS25590 (JSMCR1_p603) | 25084..25293 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| JSMCR1_RS25595 (JSMCR1_p604) | 25390..25614 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| JSMCR1_RS25600 (JSMCR1_p605) | 25666..25926 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| JSMCR1_RS25605 (JSMCR1_p606) | 25916..26167 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| JSMCR1_RS25610 (JSMCR1_p608) | 26717..26995 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| JSMCR1_RS25615 (JSMCR1_p610) | 27415..27681 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JSMCR1_RS25620 (JSMCR1_p611) | 27788..28231 | - | 444 | WP_000068545.1 | hypothetical protein | - |
| JSMCR1_RS25625 (JSMCR1_p613) | 28528..28710 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| JSMCR1_RS25630 (JSMCR1_p614) | 28735..29172 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JSMCR1_RS25635 (JSMCR1_p615) | 29303..29629 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| JSMCR1_RS25640 (JSMCR1_p616) | 29649..30356 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| JSMCR1_RS25645 (JSMCR1_p617) | 30358..31110 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| JSMCR1_RS25650 (JSMCR1_p618) | 31128..31529 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| JSMCR1_RS25655 (JSMCR1_p619) | 31897..32238 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| JSMCR1_RS25660 (JSMCR1_p620) | 32235..36548 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| JSMCR1_RS25665 (JSMCR1_p621) | 36769..38394 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| JSMCR1_RS25670 (JSMCR1_p622) | 38466..39218 | + | 753 | WP_063107420.1 | PAP2 family protein | - |
| JSMCR1_RS25675 (JSMCR1_p623) | 39199..39639 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| JSMCR1_RS25680 (JSMCR1_p626) | 39985..40191 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| JSMCR1_RS25685 (JSMCR1_p627) | 40260..42425 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| JSMCR1_RS25690 (JSMCR1_p628) | 42430..43005 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| JSMCR1_RS25695 (JSMCR1_p629) | 43175..44851 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| JSMCR1_RS25700 (JSMCR1_p630) | 44946..45478 | - | 533 | Protein_62 | thermonuclease family protein | - |
| JSMCR1_RS25705 (JSMCR1_p631) | 45508..46161 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| JSMCR1_RS25710 (JSMCR1_p632) | 46173..47297 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| JSMCR1_RS25715 (JSMCR1_p633) | 47435..47590 | + | 156 | WP_001358489.1 | hypothetical protein | - |
| JSMCR1_RS25720 (JSMCR1_p634) | 47587..47937 | - | 351 | WP_256625389.1 | shufflon protein C | - |
| JSMCR1_RS25725 (JSMCR1_p637) | 48565..49692 | - | 1128 | Protein_67 | hypothetical protein | VF |
| JSMCR1_RS25730 (JSMCR1_p638) | 49705..50340 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JSMCR1_RS25735 (JSMCR1_p639) | 50344..50826 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| JSMCR1_RS25740 (JSMCR1_p640) | 50893..51450 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| JSMCR1_RS25745 (JSMCR1_p641) | 51495..52604 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JSMCR1_RS25750 (JSMCR1_p642) | 52595..54133 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| JSMCR1_RS25755 (JSMCR1_p643) | 54158..54652 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| JSMCR1_RS25760 (JSMCR1_p644) | 54636..55946 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| JSMCR1_RS25765 (JSMCR1_p645) | 55997..57640 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| JSMCR1_RS25770 (JSMCR1_p646) | 57633..58169 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| JSMCR1_RS25775 | 58216..60169 | - | 1954 | Protein_77 | type IV secretory system conjugative DNA transfer family protein | - |
| JSMCR1_RS25780 | 60196..61236 | - | 1041 | Protein_78 | P-type DNA transfer ATPase VirB11 | - |
| JSMCR1_RS25785 (JSMCR1_p653) | 61349..61735 | - | 387 | WP_256625390.1 | Type IV secretion system protein virB10 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|