MGE detailed information
MGE type: Mobilizable plasmid MGE length: 134064 bp
Accession: NZ_CP030154 Location: 1..134064 Organism: Escherichia coli strain JSMCR1 Replicon: plasmid pJSMCR1_2
Accession: NZ_CP030154 Location: 1..134064 Organism: Escherichia coli strain JSMCR1 Replicon: plasmid pJSMCR1_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSMCR1_RS24110 (JSMCR1_p231) | 1261..2164 | - | 904 | Protein_0 | IS3 family transposase ISEhe3 | Transposase |
| JSMCR1_RS24115 (JSMCR1_p232) | 2240..2548 | - | 309 | Protein_1 | integrase core domain-containing protein | - |
| JSMCR1_RS24120 (JSMCR1_p233) | 2565..3641 | - | 1077 | WP_038989268.1 | IS110 family transposase ISEc21 | Transposase |
| JSMCR1_RS24125 (JSMCR1_p234) | 3923..4519 | - | 597 | Protein_3 | IS3 family transposase IS911 | Transposase |
| JSMCR1_RS24130 (JSMCR1_p236) | 4584..5735 | + | 1152 | WP_094888174.1 | IS30 family transposase IS30D | Transposase |
| JSMCR1_RS24135 | 5745..5993 | - | 249 | Protein_5 | IS3 family transposase ISEhe3 | Transposase |
| JSMCR1_RS24140 (JSMCR1_p239) | 6391..6546 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| JSMCR1_RS24145 (JSMCR1_p241) | 6740..7852 | - | 1113 | WP_256625378.1 | IS4 family transposase IS421 | Transposase |
| JSMCR1_RS24150 (JSMCR1_p242) | 8012..8521 | - | 510 | WP_000509940.1 | hypothetical protein | - |
| JSMCR1_RS24155 (JSMCR1_p243) | 8533..9114 | - | 582 | WP_038989210.1 | hypothetical protein | - |
| JSMCR1_RS24160 (JSMCR1_p245) | 9150..9965 | - | 816 | WP_001514461.1 | hypothetical protein | - |
| JSMCR1_RS24165 (JSMCR1_p246) | 9975..11564 | - | 1590 | WP_038989212.1 | hypothetical protein | - |
| JSMCR1_RS24170 (JSMCR1_p247) | 11624..13330 | - | 1707 | WP_038989213.1 | hypothetical protein | - |
| JSMCR1_RS24175 (JSMCR1_p248) | 13556..14557 | - | 1002 | WP_000038866.1 | ParB family protein | - |
| JSMCR1_RS24180 (JSMCR1_p249) | 14574..15770 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| JSMCR1_RS24185 (JSMCR1_p250) | 15939..16748 | - | 810 | WP_032247076.1 | GIY-YIG nuclease family protein | - |
| JSMCR1_RS24190 (JSMCR1_p251) | 17041..17925 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| JSMCR1_RS24195 (JSMCR1_p252) | 18261..18653 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| JSMCR1_RS24200 (JSMCR1_p253) | 18663..18794 | - | 132 | WP_001113883.1 | hypothetical protein | - |
| JSMCR1_RS24205 (JSMCR1_p254) | 18829..19251 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| JSMCR1_RS24210 (JSMCR1_p255) | 19291..19698 | - | 408 | Protein_20 | hypothetical protein | - |
| JSMCR1_RS24220 (JSMCR1_p262) | 22490..23371 | - | 882 | WP_256625379.1 | RepB family plasmid replication initiator protein | - |
| JSMCR1_RS24225 | 23776..24141 | + | 366 | Protein_23 | DUF4165 domain-containing protein | - |
| JSMCR1_RS24230 | 24432..24479 | + | 48 | Protein_24 | hypothetical protein | - |
| JSMCR1_RS24235 | 24621..26159 | + | 1539 | WP_224706370.1 | Ig-like domain-containing protein | - |
| JSMCR1_RS24240 (JSMCR1_p264) | 26503..27207 | - | 705 | Protein_26 | IS6 family transposase IS15DI | Transposase |
| JSMCR1_RS24245 | 27271..27393 | + | 123 | Protein_27 | IS66 family insertion sequence element accessory protein TnpB | - |
| JSMCR1_RS24250 (JSMCR1_p266) | 27485..28266 | - | 782 | Protein_28 | IS21 family transposase IS100kyp | Transposase |
| JSMCR1_RS24255 | 28263..28871 | - | 609 | Protein_29 | IS21 family transposase IS100kyp | Transposase |
| JSMCR1_RS24260 | 28885..29257 | - | 373 | Protein_30 | IS1 family transposase | - |
| JSMCR1_RS24265 (JSMCR1_p271) | 29767..30477 | + | 711 | WP_119173451.1 | CHASE9 sensor domain-containing protein | - |
| JSMCR1_RS24270 (JSMCR1_p272) | 30456..32099 | + | 1644 | WP_256625380.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| JSMCR1_RS24275 (JSMCR1_p273) | 32175..33434 | + | 1260 | WP_256625381.1 | GGDEF domain-containing protein | - |
| JSMCR1_RS24280 | 33481..34177 | - | 697 | Protein_34 | IS1 family transposase | - |
| JSMCR1_RS24285 (JSMCR1_p277) | 34258..36363 | + | 2106 | WP_050489276.1 | UDP-forming cellulose synthase catalytic subunit | - |
| JSMCR1_RS24290 (JSMCR1_p278) | 36427..38577 | + | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| JSMCR1_RS24295 (JSMCR1_p280) | 39321..40667 | + | 1347 | WP_059039599.1 | group II intron reverse transcriptase/maturase | - |
| JSMCR1_RS24300 (JSMCR1_p281) | 40854..41240 | + | 387 | Protein_38 | IS200/IS605 family transposase | - |
| JSMCR1_RS24305 | 41573..41725 | + | 153 | Protein_39 | endo-1,4-D-glucanase | - |
| JSMCR1_RS24310 (JSMCR1_p282) | 41707..45180 | + | 3474 | WP_104692566.1 | cellulose synthase complex outer membrane protein BcsC | - |
| JSMCR1_RS24315 (JSMCR1_p284) | 45380..45963 | + | 584 | Protein_41 | IS1 family transposase IS1G | Transposase |
| JSMCR1_RS24320 (JSMCR1_p286) | 46055..47283 | + | 1229 | WP_152921225.1 | IS3 family transposase IS2 | Transposase |
| JSMCR1_RS24325 (JSMCR1_p287) | 47291..47431 | + | 141 | Protein_43 | L-threonine dehydrogenase | - |
| JSMCR1_RS24330 (JSMCR1_p288) | 47586..48320 | - | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| JSMCR1_RS24335 | 48410..48682 | + | 273 | WP_050489281.1 | PerC family transcriptional regulator | - |
| JSMCR1_RS24345 (JSMCR1_p294) | 49849..51110 | + | 1262 | Protein_47 | hypothetical protein | - |
| JSMCR1_RS24350 (JSMCR1_p295) | 51183..51689 | + | 507 | WP_032203676.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| JSMCR1_RS24355 (JSMCR1_p297) | 51956..55072 | - | 3117 | WP_072647223.1 | HsdR family type I site-specific deoxyribonuclease | - |
| JSMCR1_RS24360 (JSMCR1_p298) | 55194..56462 | - | 1269 | WP_072647224.1 | restriction endonuclease subunit S | - |
| JSMCR1_RS24365 (JSMCR1_p299) | 56459..58015 | - | 1557 | WP_072647227.1 | type I restriction-modification system subunit M | - |
| JSMCR1_RS24370 (JSMCR1_p300) | 58198..58419 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JSMCR1_RS24375 (JSMCR1_p301) | 58419..58799 | + | 381 | WP_072647225.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JSMCR1_RS24380 (JSMCR1_p302) | 58804..58983 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| JSMCR1_RS24385 (JSMCR1_p303) | 59011..60054 | + | 1044 | WP_072647226.1 | DUF968 domain-containing protein | - |
| JSMCR1_RS24390 (JSMCR1_p304) | 60178..61146 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| JSMCR1_RS24395 | 61315..61434 | + | 120 | WP_072647269.1 | ash family protein | - |
| JSMCR1_RS24400 (JSMCR1_p306) | 61453..61674 | + | 222 | WP_001361625.1 | host cell division inhibitor Icd-like protein | - |
| JSMCR1_RS24405 | 61983..62333 | + | 351 | Protein_59 | ORF6N domain-containing protein | - |
| JSMCR1_RS24410 | 62454..62786 | + | 333 | WP_224205061.1 | phage antirepressor KilAC domain-containing protein | - |
| JSMCR1_RS24415 (JSMCR1_p308) | 62819..63670 | - | 852 | WP_000611664.1 | phage repressor protein C1 | - |
| JSMCR1_RS24420 (JSMCR1_p309) | 63781..63990 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| JSMCR1_RS24425 (JSMCR1_p311) | 64161..64858 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| JSMCR1_RS24430 (JSMCR1_p312) | 65156..67582 | + | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| JSMCR1_RS24435 (JSMCR1_p313) | 67596..68222 | + | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| JSMCR1_RS24440 (JSMCR1_p314) | 68215..68991 | + | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JSMCR1_RS24445 (JSMCR1_p315) | 69046..69642 | + | 597 | WP_032203482.1 | molecular chaperone | - |
| JSMCR1_RS24450 (JSMCR1_p316) | 69672..70169 | + | 498 | WP_000019701.1 | 4Fe-4S binding protein | - |
| JSMCR1_RS24455 (JSMCR1_p318) | 70627..71607 | + | 981 | WP_021559276.1 | IS5 family transposase ISKpn26 | Transposase |
| JSMCR1_RS24460 (JSMCR1_p321) | 72244..72465 | + | 222 | WP_000542385.1 | hypothetical protein | - |
| JSMCR1_RS24465 (JSMCR1_p322) | 72473..73504 | + | 1032 | WP_038989443.1 | site-specific integrase | - |
| JSMCR1_RS24470 (JSMCR1_p323) | 73555..73866 | + | 312 | WP_038989442.1 | hypothetical protein | - |
| JSMCR1_RS24475 (JSMCR1_p324) | 74114..74353 | + | 240 | Protein_73 | recombinase | - |
| JSMCR1_RS24480 (JSMCR1_p325) | 74378..77365 | - | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| JSMCR1_RS24485 | 77533..77937 | + | 405 | Protein_75 | recombinase family protein | - |
| JSMCR1_RS24490 (JSMCR1_p327) | 78065..79198 | - | 1134 | WP_001089729.1 | permease | - |
| JSMCR1_RS24495 (JSMCR1_p328) | 79304..79627 | + | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JSMCR1_RS24500 (JSMCR1_p330) | 79729..80426 | + | 698 | WP_223367361.1 | IS1 family transposase IS1S | Transposase |
| JSMCR1_RS24505 (JSMCR1_p332) | 80750..81073 | + | 324 | Protein_79 | Ref family protein | - |
| JSMCR1_RS24510 | 81262..81489 | + | 228 | Protein_80 | maturation control protein | - |
| JSMCR1_RS24515 (JSMCR1_p334) | 81503..83254 | - | 1752 | Protein_81 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JSMCR1_RS24520 (JSMCR1_p335) | 83258..83650 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| JSMCR1_RS24525 (JSMCR1_p336) | 83788..84672 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| JSMCR1_RS24530 (JSMCR1_p337) | 84704..85903 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| JSMCR1_RS24535 (JSMCR1_p338) | 86009..86659 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JSMCR1_RS24540 (JSMCR1_p339) | 86691..86933 | - | 243 | WP_000844627.1 | transposase | - |
| JSMCR1_RS24545 (JSMCR1_p340) | 87096..87641 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| JSMCR1_RS24550 (JSMCR1_p341) | 87778..88350 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| JSMCR1_RS24555 (JSMCR1_p342) | 88387..89778 | + | 1392 | WP_256625382.1 | ISKra4 family transposase ISKpn19 | Transposase |
| JSMCR1_RS24560 (JSMCR1_p343) | 89811..90239 | + | 429 | Protein_90 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| JSMCR1_RS24565 (JSMCR1_p344) | 90558..91214 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| JSMCR1_RS24570 | 91609..92225 | + | 617 | Protein_92 | transposase | - |
| JSMCR1_RS24575 (JSMCR1_p348) | 92292..92996 | + | 705 | WP_256625373.1 | IS6 family transposase IS26 | Transposase |
| JSMCR1_RS24580 (JSMCR1_p349) | 92942..94054 | - | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| JSMCR1_RS24585 | 94227..94679 | + | 453 | WP_000237816.1 | hypothetical protein | ARG |
| JSMCR1_RS24590 (JSMCR1_p352) | 95000..96259 | + | 1260 | WP_012300772.1 | Bicyclomycin resistance protein | ARG |
| JSMCR1_RS24595 (JSMCR1_p353) | 96524..97324 | + | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| JSMCR1_RS24600 (JSMCR1_p354) | 97341..98179 | + | 839 | Protein_98 | Streptomycin 3''-adenylyltransferase | ARG |
| JSMCR1_RS24605 (JSMCR1_p355) | 98207..98680 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| JSMCR1_RS24610 (JSMCR1_p356) | 98910..99614 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JSMCR1_RS24615 (JSMCR1_p357) | 99669..100085 | + | 417 | Protein_101 | serine hydrolase | - |
| JSMCR1_RS24620 (JSMCR1_p358) | 100232..101134 | + | 903 | Protein_102 | TCR/Tet family MFS transporter | - |
| JSMCR1_RS24625 | 101101..101289 | - | 189 | Protein_103 | IS91 family transposase | - |
| JSMCR1_RS24630 (JSMCR1_p359) | 101401..101706 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| JSMCR1_RS24635 (JSMCR1_p360) | 101734..102948 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| JSMCR1_RS24640 (JSMCR1_p361) | 103165..104049 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| JSMCR1_RS24645 (JSMCR1_p362) | 104080..105573 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| JSMCR1_RS24650 (JSMCR1_p363) | 105784..106008 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| JSMCR1_RS24655 (JSMCR1_p364) | 106005..106742 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JSMCR1_RS24660 (JSMCR1_p365) | 107228..107368 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| JSMCR1_RS24665 | 107374..108077 | - | 704 | Protein_111 | IS6 family transposase IS26 | Transposase |
| JSMCR1_RS24670 (JSMCR1_p369) | 108359..108766 | - | 408 | WP_219400842.1 | ester cyclase | - |
| JSMCR1_RS24675 (JSMCR1_p370) | 108793..109782 | - | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| JSMCR1_RS24680 (JSMCR1_p371) | 109798..110574 | - | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| JSMCR1_RS24685 (JSMCR1_p372) | 110847..111179 | + | 333 | Protein_115 | Ref family protein | - |
| JSMCR1_RS24690 (JSMCR1_p373) | 111258..112013 | + | 756 | WP_072649769.1 | hypothetical protein | - |
| JSMCR1_RS24695 (JSMCR1_p374) | 112067..112756 | - | 690 | WP_063501695.1 | EAL domain-containing protein | - |
| JSMCR1_RS24700 (JSMCR1_p375) | 112991..113712 | + | 722 | Protein_118 | helix-turn-helix domain-containing protein | - |
| JSMCR1_RS24705 | 113751..113999 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| JSMCR1_RS24710 (JSMCR1_p377) | 113996..114436 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| JSMCR1_RS24715 (JSMCR1_p378) | 114470..118438 | - | 3969 | Protein_121 | helicase-related protein | - |
| JSMCR1_RS24720 (JSMCR1_p380) | 119021..119272 | + | 252 | WP_032206515.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JSMCR1_RS24725 (JSMCR1_p381) | 119269..119556 | + | 288 | WP_032206513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JSMCR1_RS24735 (JSMCR1_p385) | 120778..124275 | - | 3498 | WP_001038839.1 | Outer membrane protein IcsA autotransporter | VF |
| JSMCR1_RS24745 (JSMCR1_p388) | 126057..126302 | - | 246 | Protein_127 | IS91 family transposase ISEc37 | Transposase |
| JSMCR1_RS24750 (JSMCR1_p389) | 126364..126804 | - | 441 | Protein_128 | IS3 family transposase ISKpn38 | Transposase |
| JSMCR1_RS24755 (JSMCR1_p391) | 126869..128031 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| JSMCR1_RS24760 (JSMCR1_p392) | 128028..128714 | - | 687 | WP_072660831.1 | conjugal transfer protein TraF | - |
| JSMCR1_RS24765 (JSMCR1_p393) | 129502..129840 | - | 339 | WP_256625375.1 | hypothetical protein | - |
| JSMCR1_RS24770 (JSMCR1_p394) | 129843..130373 | - | 531 | WP_072660832.1 | hypothetical protein | - |
| JSMCR1_RS24775 (JSMCR1_p397) | 131384..131794 | + | 411 | WP_256625376.1 | conjugative transfer protein MobI(A/C) | - |
| JSMCR1_RS24780 | 131865..132116 | + | 252 | WP_256625377.1 | hypothetical protein | - |
| JSMCR1_RS24785 (JSMCR1_p400) | 133006..133149 | + | 144 | WP_256625383.1 | hypothetical protein | - |
| JSMCR1_RS24790 | 133289..133987 | - | 699 | Protein_136 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|