NZ_CP0301531..152677

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 152677 bp
Accession: NZ_CP030153        Location: 1..152677         Organism: Escherichia coli strain JSMCR1       Replicon: plasmid pJSMCR1_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JSMCR1_RS23215 (117) 117..851 + 735 WP_256625369.1 hypothetical protein -
JSMCR1_RS23220 (1027) 1027..1809 - 783 WP_256625370.1 IS21 family transposase IS100kyp Transposase
JSMCR1_RS23225 (1806) 1806..2828 - 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
JSMCR1_RS23230 (2895) 2895..4433 - 1539 WP_256625371.1 AAA family ATPase -
JSMCR1_RS23235 (4741) 4741..4971 + 231 WP_001261287.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
JSMCR1_RS23240 (4968) 4968..5384 + 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
JSMCR1_RS23245 (5546) 5546..7684 - 2139 WP_000350635.1 AAA family ATPase -
JSMCR1_RS23250 (8038) 8038..8295 + 258 WP_000343085.1 hypothetical protein -
JSMCR1_RS23255 (8295) 8295..8885 + 591 WP_000194575.1 hypothetical protein -
JSMCR1_RS23260 (9148) 9148..10704 + 1557 WP_024126035.1 AAA family ATPase -
JSMCR1_RS23265 (10895) 10895..11512 + 618 WP_000521603.1 ProQ/FINO family protein -
JSMCR1_RS23270 (11805) 11805..12884 - 1080 WP_063117293.1 permease -
JSMCR1_RS23275 (12989) 12989..13312 + 324 WP_001175594.1 metalloregulator ArsR/SmtB family transcription factor -
JSMCR1_RS23280 (13473) 13473..13793 + 321 Protein_13 NAD(P)H-dependent oxidoreductase -
JSMCR1_RS23285 (13846) 13846..14550 - 705 WP_001067834.1 IS6 family transposase IS26 Transposase
JSMCR1_RS23290 (14616) 14616..15959 + 1344 Protein_15 Tn3 family transposase TnpA_TnAs1 Transposase
JSMCR1_RS23295 (16010) 16010..16714 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
JSMCR1_RS23300 (16780) 16780..17064 + 285 Protein_17 IS6 family transposase IS26 Transposase
JSMCR1_RS23305 (17254) 17254..18069 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
JSMCR1_RS23310 (18220) 18220..18924 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
JSMCR1_RS23315 (18977) 18977..19285 + 309 Protein_20 DUF945 domain-containing protein -
JSMCR1_RS23320 (19582) 19582..20229 - 648 WP_000614936.1 hypothetical protein VF
JSMCR1_RS23325 (20506) 20506..20889 + 384 WP_000124981.1 conjugal transfer relaxosome DNA-binding protein TraM -
JSMCR1_RS23330 (21080) 21080..21766 + 687 WP_000332484.1 PAS domain-containing protein -
JSMCR1_RS23335 (21860) 21860..22087 + 228 WP_001254386.1 conjugal transfer relaxosome protein TraY -
JSMCR1_RS23340 (22121) 22121..22480 + 360 WP_000340272.1 type IV conjugative transfer system pilin TraA -
JSMCR1_RS23345 (22495) 22495..22806 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
JSMCR1_RS23350 (22828) 22828..23394 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
JSMCR1_RS23355 (23381) 23381..24109 + 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
JSMCR1_RS23360 (24109) 24109..25536 + 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
JSMCR1_RS23365 (25526) 25526..26098 + 573 WP_000002780.1 conjugal transfer pilus-stabilizing protein TraP -
JSMCR1_RS23370 (26095) 26095..26412 + 318 WP_001057292.1 conjugal transfer protein TrbD -
JSMCR1_RS23375 (26409) 26409..26660 + 252 WP_001038341.1 conjugal transfer protein TrbG -
JSMCR1_RS23380 (26657) 26657..27172 + 516 WP_000809906.1 type IV conjugative transfer system lipoprotein TraV -
JSMCR1_RS23385 (27307) 27307..27528 + 222 WP_001278689.1 conjugal transfer protein TraR -
JSMCR1_RS23390 (27688) 27688..30315 + 2628 WP_001064268.1 type IV secretion system protein TraC -
JSMCR1_RS23395 (30312) 30312..30698 + 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
JSMCR1_RS23400 (30695) 30695..31327 + 633 WP_001203745.1 type-F conjugative transfer system protein TraW -
JSMCR1_RS23405 (31324) 31324..32316 + 993 WP_000830839.1 conjugal transfer pilus assembly protein TraU -
JSMCR1_RS23410 (32342) 32342..32803 + 462 WP_000277845.1 hypothetical protein -
JSMCR1_RS23415 (32833) 32833..33285 + 453 WP_000069427.1 hypothetical protein -
JSMCR1_RS23420 (33313) 33313..33951 + 639 WP_001104248.1 type-F conjugative transfer system pilin assembly protein TrbC -
JSMCR1_RS23425 (33948) 33948..35756 + 1809 WP_000821821.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
JSMCR1_RS23430 (35783) 35783..36040 + 258 WP_000864325.1 conjugal transfer protein TrbE -
JSMCR1_RS23435 (36033) 36033..36776 + 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
JSMCR1_RS23440 (36792) 36792..37139 + 348 WP_001287893.1 conjugal transfer protein TrbA -
JSMCR1_RS23445 (37258) 37258..37542 + 285 WP_000624110.1 type-F conjugative transfer system pilin chaperone TraQ -
JSMCR1_RS23450 (37529) 37529..38074 + 546 WP_000052618.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
JSMCR1_RS23455 (38004) 38004..38366 + 363 WP_001443292.1 P-type conjugative transfer protein TrbJ -
JSMCR1_RS23460 (38366) 38366..39739 + 1374 WP_001137358.1 conjugal transfer pilus assembly protein TraH -
JSMCR1_RS23465 (39736) 39736..42558 + 2823 WP_001007026.1 conjugal transfer mating-pair stabilization protein TraG -
JSMCR1_RS23470 (42573) 42573..43076 + 504 WP_000605510.1 hypothetical protein -
JSMCR1_RS23475 (43129) 43129..43839 + 711 WP_042032882.1 conjugal transfer complement resistance protein TraT -
JSMCR1_RS23480 (44092) 44092..46263 + 2172 WP_000009362.1 type IV conjugative transfer system coupling protein TraD -
JSMCR1_RS23485 (46263) 46263..51533 + 5271 WP_256625372.1 Multifunctional conjugation protein TraI Relaxase
JSMCR1_RS23490 (51553) 51553..52299 + 747 WP_000205777.1 conjugal transfer pilus acetylase TraX -
JSMCR1_RS23495 (52354) 52354..52914 + 561 WP_000139359.1 fertility inhibition protein FinO -
JSMCR1_RS23500 (53052) 53052..53264 + 213 WP_012311405.1 hypothetical protein -
JSMCR1_RS23505 (53507) 53507..53968 + 462 WP_001233871.1 thermonuclease family protein -
JSMCR1_RS23510 (54014) 54014..54223 + 210 WP_001333231.1 hemolysin expression modulator Hha -
JSMCR1_RS23515 (54261) 54261..54834 + 574 Protein_60 DUF2726 domain-containing protein -
JSMCR1_RS23520 (55073) 55073..55333 + 261 WP_000083818.1 replication regulatory protein RepA -
JSMCR1_RS23525 (55359) 55359..55595 - 237 WP_223368648.1 replication protein RepA -
JSMCR1_RS23530 (55586) 55586..55633 + 48 WP_077822033.1 hypothetical protein -
JSMCR1_RS23535 (55626) 55626..56483 + 858 WP_000130940.1 incFII family plasmid replication initiator RepA -
JSMCR1_RS23540 (57423) 57423..58076 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
JSMCR1_RS23545 (58169) 58169..58426 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
JSMCR1_RS23550 (58359) 58359..58760 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
JSMCR1_RS23555 (59156) 59156..59590 - 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
JSMCR1_RS23560 (59662) 59662..59751 + 90 Protein_69 mercuric transporter MerT family protein -
JSMCR1_RS23565 (59785) 59785..62784 - 3000 WP_072834372.1 Tn3 family transposase TnpA_Tn3 Transposase
JSMCR1_RS23570 (62843) 62843..63547 + 705 WP_001067858.1 IS6-like element IS26 family transposase -
JSMCR1_RS23575 (63597) 63597..64070 + 474 Protein_72 recombinase family protein -
JSMCR1_RS23580 (64073) 64073..64204 + 132 Protein_73 DUF4158 domain-containing protein -
JSMCR1_RS23585 (64227) 64227..64931 - 705 WP_001067834.1 IS6-like element IS26 family transposase -
JSMCR1_RS23590 (65317) 65317..65733 + 417 WP_014839980.1 Glutathione transferase FosA ARG
JSMCR1_RS23595 (65738) 65738..66256 - 519 WP_014839979.1 FidL-like protein -
JSMCR1_RS23600 (66256) 66256..67044 - 789 WP_014839978.1 winged helix-turn-helix domain-containing protein -
JSMCR1_RS23605 (67064) 67064..67489 - 426 Protein_78 TetR/AcrR family transcriptional regulator -
JSMCR1_RS23610 (67544) 67544..68248 - 705 WP_001067855.1 IS6-like element IS26 family transposase -
JSMCR1_RS23615 (68285) 68285..69397 - 1113 WP_176672775.1 DUF3883 domain-containing protein -
JSMCR1_RS23620 (69448) 69448..69675 - 228 WP_000248278.1 hypothetical protein -
JSMCR1_RS23625 (69699) 69699..69890 + 192 WP_000951934.1 hypothetical protein -
JSMCR1_RS23630 (70372) 70372..70914 - 543 WP_000587837.1 AAA family ATPase -
JSMCR1_RS23635 (70927) 70927..71787 - 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
JSMCR1_RS23640 (71930) 71930..72835 + 906 Protein_85 IS4 family transposase IS10R Transposase
JSMCR1_RS23645 (72884) 72884..73588 - 705 WP_131149487.1 IS6-like element IS26 family transposase -
JSMCR1_RS23650 (73613) 73613..74128 + 516 Protein_87 PAS domain-containing protein -
JSMCR1_RS23655 (74196) 74196..75293 - 1098 Protein_88 TonB-dependent receptor -
JSMCR1_RS23660 (75350) 75350..76318 - 969 WP_013362812.1 IS5 family transposase IS903B Transposase
JSMCR1_RS23665 (76353) 76353..77228 - 876 WP_013188475.1 Beta-lactamase Toho-1 ARG
JSMCR1_RS23670 (77478) 77478..77669 - 192 Protein_91 IS1380 family transposase -
JSMCR1_RS23675 (77733) 77733..78359 - 627 WP_000434930.1 hypothetical protein -
JSMCR1_RS23680 (78359) 78359..80038 - 1680 WP_256625366.1 AAA family ATPase -
JSMCR1_RS23685 (80097) 80097..80801 + 705 WP_001067855.1 IS6-like element IS26 family transposase -
JSMCR1_RS23690 (80865) 80865..81374 - 510 Protein_95 DUF945 domain-containing protein -
JSMCR1_RS23695 (81496) 81496..81783 - 288 WP_000107535.1 hypothetical protein -
JSMCR1_RS23700 (81808) 81808..82014 - 207 WP_000547939.1 hypothetical protein -
JSMCR1_RS23705 (82084) 82084..82257 + 174 Protein_98 hypothetical protein -
JSMCR1_RS23710 (82255) 82255..82485 - 231 WP_001426396.1 hypothetical protein -
JSMCR1_RS23715 (82705) 82705..82830 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
JSMCR1_RS23720 (82772) 82772..82921 - 150 Protein_101 plasmid maintenance protein Mok -
- (82907) 82907..83131 - 225 NuclAT_0 - Antitoxin Detail
- (82907) 82907..83131 - 225 NuclAT_0 - Antitoxin Detail
- (82907) 82907..83131 - 225 NuclAT_0 - Antitoxin Detail
- (82907) 82907..83131 - 225 NuclAT_0 - Antitoxin Detail
JSMCR1_RS23725 (82943) 82943..83131 + 189 WP_001299721.1 hypothetical protein -
JSMCR1_RS23730 (83100) 83100..83862 - 763 Protein_103 plasmid SOS inhibition protein A -
JSMCR1_RS23735 (83859) 83859..84293 - 435 WP_000845895.1 conjugation system SOS inhibitor PsiB -
JSMCR1_RS23740 (84348) 84348..86306 - 1959 WP_001145469.1 ParB/RepB/Spo0J family partition protein -
JSMCR1_RS23745 (86365) 86365..86598 - 234 WP_000006004.1 DUF905 domain-containing protein -
JSMCR1_RS23750 (86654) 86654..87181 - 528 WP_000290793.1 single-stranded DNA-binding protein -
JSMCR1_RS23755 (87654) 87654..87914 - 261 WP_072132736.1 hypothetical protein -
JSMCR1_RS23760 (87824) 87824..88066 - 243 WP_001610271.1 hypothetical protein -
JSMCR1_RS23765 (88066) 88066..88629 - 564 WP_001311069.1 class I SAM-dependent methyltransferase -
JSMCR1_RS23770 (88675) 88675..90036 - 1362 WP_000170681.1 DUF3560 domain-containing protein -
JSMCR1_RS23775 (90088) 90088..90318 - 231 WP_000218642.1 hypothetical protein -
JSMCR1_RS23780 (90835) 90835..91088 + 254 Protein_113 hypothetical protein -
JSMCR1_RS23785 (91312) 91312..91494 - 183 WP_001027505.1 hypothetical protein -
JSMCR1_RS23790 (91494) 91494..91955 - 462 WP_042007484.1 DUF1380 family protein -
JSMCR1_RS23795 (91955) 91955..92380 - 426 WP_001198922.1 antirestriction protein -
JSMCR1_RS23800 (92782) 92782..93753 + 972 WP_000082154.1 IS110 family transposase ISEc32 Transposase
JSMCR1_RS23810 (94554) 94554..94889 - 336 WP_000343070.1 hypothetical protein -
JSMCR1_RS23815 (94958) 94958..95305 - 348 WP_001350917.1 hypothetical protein -
JSMCR1_RS23820 (95302) 95302..95471 - 170 Protein_121 hypothetical protein -
JSMCR1_RS23825 (95936) 95936..96907 - 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
JSMCR1_RS23830 (96907) 96907..98073 - 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
JSMCR1_RS23840 (99226) 99226..100728 - 1503 WP_000715078.1 hypothetical protein -
JSMCR1_RS23845 (101346) 101346..101771 - 426 WP_012300440.1 hypothetical protein -
JSMCR1_RS23850 (101913) 101913..102392 + 480 WP_000190053.1 hypothetical protein -
JSMCR1_RS23855 (102832) 102832..103083 + 252 WP_000163248.1 hypothetical protein -
JSMCR1_RS23860 (103056) 103056..103187 - 132 Protein_129 phosphopyruvate hydratase -
JSMCR1_RS23865 (103185) 103185..103442 + 258 Protein_130 transposase -
JSMCR1_RS23870 (103676) 103676..104533 - 858 WP_000968140.1 Manganese transport system membrane protein MntB ARG
JSMCR1_RS23875 (104530) 104530..105387 - 858 WP_000992806.1 Manganese transport system membrane protein MntB ARG
JSMCR1_RS23880 (105384) 105384..106211 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
JSMCR1_RS23885 (106211) 106211..107125 - 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
JSMCR1_RS23890 (107481) 107481..108178 + 698 WP_224158172.1 IS1-like element IS1A family transposase -
JSMCR1_RS23895 (108358) 108358..108871 - 514 Protein_136 DUF4113 domain-containing protein -
JSMCR1_RS23900 (108932) 108932..109036 - 105 Protein_137 AAA family ATPase -
JSMCR1_RS23905 (109038) 109038..109361 - 324 Protein_138 IS21 family transposase IS21 Transposase
JSMCR1_RS23910 (109610) 109610..110823 + 1214 WP_085947772.1 IS3 family transposase ISCfr6 Transposase
JSMCR1_RS23915 (111447) 111447..112424 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
JSMCR1_RS23920 (112709) 112709..113449 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
JSMCR1_RS23925 (113570) 113570..113758 - 189 WP_014640565.1 hypothetical protein -
JSMCR1_RS23930 (114132) 114132..115034 - 903 WP_001312822.1 hypothetical protein VF
JSMCR1_RS23935 (115103) 115103..116212 - 1110 WP_000771475.1 SDR family oxidoreductase -
JSMCR1_RS23940 (116645) 116645..117598 - 954 WP_000280980.1 Protease 7 VF
JSMCR1_RS23945 (117702) 117702..118091 + 390 WP_001332050.1 IS110 family transposase ISEc20 Transposase
JSMCR1_RS23950 (118895) 118895..119074 - 180 Protein_147 transposase -
JSMCR1_RS23955 (119213) 119213..119503 + 291 Protein_148 IS3 family transposase IS1203 Transposase
JSMCR1_RS23960 (119571) 119571..120268 + 698 WP_103215986.1 IS1-like element IS1A family transposase -
JSMCR1_RS23965 (120262) 120262..120543 - 282 WP_072834405.1 hypothetical protein -
JSMCR1_RS23970 (120684) 120684..122510 - 1827 WP_001339650.1 AAA family ATPase -
JSMCR1_RS23975 (122513) 122513..122998 - 486 WP_001015823.1 hypothetical protein -
JSMCR1_RS23980 (122988) 122988..124088 - 1101 WP_072714138.1 hypothetical protein -
JSMCR1_RS23985 (124618) 124618..124767 - 150 Protein_154 IS3 family transposase IS2 Transposase
JSMCR1_RS23990 (124945) 124945..126138 - 1194 WP_000450494.1 GTP-binding protein -
JSMCR1_RS23995 (127361) 127361..128597 - 1237 Protein_156 IS3 family transposase IS2 Transposase
JSMCR1_RS24000 (129224) 129224..129517 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
JSMCR1_RS24005 (129575) 129575..129774 - 200 Protein_158 lysis protein -
JSMCR1_RS24010 (130328) 130328..131353 + 1026 Protein_159 integrase core domain-containing protein -
JSMCR1_RS24015 (132664) 132664..133779 + 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
JSMCR1_RS24020 (133919) 133919..137578 + 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
JSMCR1_RS24025 (137682) 137682..138911 + 1230 WP_001552738.1 Enterochelin esterase VF
JSMCR1_RS24030 (138996) 138996..139952 + 957 WP_000271276.1 Ferri-bacillibactin esterase BesA VF
JSMCR1_RS24035 (139997) 139997..142174 - 2178 WP_001222186.1 Ferric enterobactin receptor VF
JSMCR1_RS24045 (143258) 143258..143332 - 75 Protein_166 colicin -
JSMCR1_RS24050 (143310) 143310..143546 - 237 WP_014640552.1 colicin V immunity protein -
JSMCR1_RS24055 (144087) 144087..144290 - 204 Protein_168 hypothetical protein -
JSMCR1_RS24060 (144463) 144463..144630 + 168 Protein_169 colicin-B -
JSMCR1_RS24065 (144648) 144648..145175 - 528 WP_000203272.1 colicin B immunity protein -
JSMCR1_RS24070 (145419) 145419..146234 + 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
JSMCR1_RS24075 (146284) 146284..146637 - 354 WP_000864812.1 colicin M immunity protein -
JSMCR1_RS24080 (146815) 146815..147606 - 792 WP_000016493.1 site-specific integrase -
JSMCR1_RS24085 (147932) 147932..148291 - 360 WP_250391373.1 hypothetical protein -
JSMCR1_RS24090 (148335) 148335..148685 - 351 WP_000493379.1 hypothetical protein -
JSMCR1_RS24095 (149402) 149402..149893 + 492 WP_256625367.1 hypothetical protein -
JSMCR1_RS24100 (149963) 149963..150358 + 396 WP_072275755.1 hypothetical protein -
JSMCR1_RS24105 (150316) 150316..151068 + 753 WP_256625368.1 S-4TM family putative pore-forming effector -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance