MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88421 bp
Accession: NZ_CP030112 Location: 1..88421 Organism: Escherichia coli strain MCJCHV-1 Replicon: plasmid pNMEC-O75A
Accession: NZ_CP030112 Location: 1..88421 Organism: Escherichia coli strain MCJCHV-1 Replicon: plasmid pNMEC-O75A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPQ29_RS25460 () | 1..978 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| DPQ29_RS25470 () | 1724..2047 | + | 324 | Protein_1 | IS21 family transposase IS21 | Transposase |
| DPQ29_RS26515 () | 2049..2153 | + | 105 | Protein_2 | AAA family ATPase | - |
| DPQ29_RS25480 () | 2214..2727 | + | 514 | Protein_3 | DUF4113 domain-containing protein | - |
| DPQ29_RS25485 () | 2907..3604 | - | 698 | Protein_4 | IS1 family transposase IS1A | Transposase |
| DPQ29_RS25505 () | 3907..4604 | + | 698 | Protein_5 | IS1 family transposase IS1A | Transposase |
| DPQ29_RS25515 () | 4858..5880 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| DPQ29_RS25520 () | 5865..7430 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| DPQ29_RS25525 () | 7505..7921 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DPQ29_RS25530 () | 7918..8148 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DPQ29_RS25535 () | 8529..12323 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| DPQ29_RS25540 () | 12368..12784 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DPQ29_RS25545 () | 12781..13011 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DPQ29_RS25550 () | 13276..13776 | + | 501 | WP_001773886.1 | hypothetical protein | - |
| DPQ29_RS25555 () | 13789..14562 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| DPQ29_RS25560 () | 14729..15862 | + | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| DPQ29_RS25565 () | 15896..16408 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| DPQ29_RS25570 () | 16975..17193 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DPQ29_RS25575 () | 17195..17500 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DPQ29_RS25580 () | 17501..18307 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| DPQ29_RS25585 () | 19081..19836 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| DPQ29_RS25590 () | 20424..21590 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| DPQ29_RS25595 () | 21590..22561 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| DPQ29_RS25610 () | 23428..24330 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| DPQ29_RS25615 () | 24334..24638 | + | 305 | Protein_24 | hypothetical protein | - |
| DPQ29_RS25620 () | 24715..25398 | + | 684 | WP_000086185.1 | DNA methylase | - |
| DPQ29_RS25625 () | 25399..25620 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| DPQ29_RS25630 () | 25634..26068 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| DPQ29_RS26355 () | 26119..26895 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| DPQ29_RS25645 () | 27435..27737 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| DPQ29_RS25650 () | 27784..28206 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| DPQ29_RS25655 () | 28203..28394 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| DPQ29_RS25670 () | 29429..29659 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| DPQ29_RS25675 () | 29711..31072 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| DPQ29_RS25680 () | 31120..31683 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| DPQ29_RS25685 () | 31709..31915 | + | 207 | WP_001774176.1 | hypothetical protein | - |
| DPQ29_RS25710 () | 33210..35111 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| DPQ29_RS25715 () | 35261..35758 | + | 498 | WP_042045560.1 | single-stranded DNA-binding protein | - |
| DPQ29_RS25730 () | 36221..36874 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| DPQ29_RS26360 () | 36967..37224 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| DPQ29_RS25735 () | 37157..37558 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| DPQ29_RS25745 () | 37843..39153 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| DPQ29_RS25750 () | 39182..39280 | + | 99 | Protein_42 | IS1 family transposase | - |
| DPQ29_RS25755 () | 39430..40290 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| DPQ29_RS25760 () | 40589..41293 | + | 705 | WP_114523785.1 | IS6 family transposase IS15DI | Transposase |
| DPQ29_RS26520 () | 41345..41449 | - | 105 | Protein_45 | tunicamycin resistance protein | - |
| DPQ29_RS25770 () | 41462..42322 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| DPQ29_RS25780 () | 42465..43427 | + | 963 | Protein_47 | IS4 family transposase IS10R | Transposase |
| DPQ29_RS25785 () | 43537..43815 | + | 279 | Protein_48 | IS4 family transposase | - |
| DPQ29_RS25790 () | 43869..44573 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DPQ29_RS25795 () | 44637..45083 | + | 447 | Protein_50 | tunicamycin resistance protein | - |
| DPQ29_RS25800 () | 45565..45756 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| DPQ29_RS25805 () | 45780..46007 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| DPQ29_RS25810 () | 46058..47194 | + | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| DPQ29_RS25815 () | 47309..48671 | + | 1363 | Protein_54 | IS1182 family transposase ISCfr1 | Transposase |
| DPQ29_RS25820 () | 48637..49341 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DPQ29_RS25830 () | 49491..49649 | + | 159 | WP_000449408.1 | DsbA family protein | - |
| DPQ29_RS25835 () | 49639..50145 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| DPQ29_RS25840 () | 50328..51143 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| DPQ29_RS25850 () | 51490..53376 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| DPQ29_RS25855 () | 53417..53944 | + | 528 | WP_000178050.1 | iron transporter | - |
| DPQ29_RS25860 () | 54048..55427 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| DPQ29_RS25865 () | 55430..56713 | + | 1284 | WP_033561596.1 | ABC transporter permease | - |
| DPQ29_RS25870 () | 56703..57833 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| DPQ29_RS25875 () | 57838..58533 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| DPQ29_RS25880 () | 58520..59005 | + | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| DPQ29_RS25885 () | 59030..59515 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| DPQ29_RS25890 () | 59637..60270 | + | 634 | Protein_67 | histidine-type phosphatase | - |
| DPQ29_RS26525 () | 60420..60593 | - | 174 | Protein_68 | IS5 family transposase ISKpn26 | Transposase |
| DPQ29_RS26530 () | 60594..60908 | - | 315 | Protein_69 | IS5 family transposase ISKpn26 | Transposase |
| DPQ29_RS25905 () | 61579..62318 | - | 740 | Protein_70 | IS3 family transposase IS629 | Transposase |
| DPQ29_RS25910 () | 62420..62680 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| DPQ29_RS25915 () | 62677..63186 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| DPQ29_RS25920 () | 63206..63553 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| DPQ29_RS25930 () | 63682..64017 | + | 336 | WP_001080732.1 | colicin transporter | - |
| DPQ29_RS25950 () | 65469..66155 | + | 687 | Protein_75 | primase alpha helix C-terminal domain-containing protein | - |
| DPQ29_RS25955 () | 66487..67362 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| DPQ29_RS25960 () | 67370..68146 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| DPQ29_RS25965 () | 68315..70576 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| DPQ29_RS25970 () | 70645..71820 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| DPQ29_RS25980 () | 72343..72648 | - | 306 | Protein_80 | IS91 family transposase ISSbo1 | Transposase |
| DPQ29_RS25985 () | 72674..73413 | + | 740 | Protein_81 | IS3 family transposase IS629 | Transposase |
| DPQ29_RS25995 () | 74086..75594 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| DPQ29_RS26000 () | 75684..76067 | + | 384 | Protein_83 | IS3 family transposase IS629 | Transposase |
| DPQ29_RS26005 () | 76096..76500 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| DPQ29_RS26010 () | 76497..76844 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| DPQ29_RS26015 () | 76893..77838 | + | 946 | Protein_86 | IS66 family transposase ISEc8 | Transposase |
| DPQ29_RS26020 () | 77924..78946 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| DPQ29_RS26025 () | 78943..79725 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| DPQ29_RS26030 () | 79793..80401 | + | 609 | Protein_89 | IS66 family transposase ISEc22 | Transposase |
| DPQ29_RS26035 () | 80464..81255 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| DPQ29_RS26040 () | 81262..83232 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| DPQ29_RS26045 () | 83514..83950 | + | 437 | Protein_92 | IS3 family transposase IS2 | Transposase |
| DPQ29_RS26050 () | 84475..84747 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| DPQ29_RS26055 () | 85193..85368 | + | 176 | Protein_94 | IS3 family transposase | - |
| DPQ29_RS26060 () | 85594..86763 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| DPQ29_RS26065 () | 87130..87318 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| DPQ29_RS26070 () | 87439..88179 | + | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|