MGE detailed information
MGE type: Genomic_island MGE length: 56319 bp
Accession: NZ_CP030111 Location: 4362498..4418816 Organism: Escherichia coli strain MCJCHV-1 Replicon: chromosome
Accession: NZ_CP030111 Location: 4362498..4418816 Organism: Escherichia coli strain MCJCHV-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPQ29_RS22545 () | 4357937..4358630 | + | 694 | Protein_4135 | IS1 family transposase | - |
| DPQ29_RS22555 () | 4359248..4359595 | + | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| DPQ29_RS22560 () | 4359665..4360821 | + | 1157 | Protein_4137 | IS3 family transposase | - |
| DPQ29_RS22565 () | 4360842..4361027 | + | 186 | Protein_4138 | transposase domain-containing protein | - |
| DPQ29_RS22570 () | 4361162..4362490 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| DPQ29_RS22575 () | 4362498..4363073 | + | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| DPQ29_RS22585 () | 4363626..4364351 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| DPQ29_RS22590 () | 4364348..4365667 | - | 1320 | WP_000508958.1 | hypothetical protein | - |
| DPQ29_RS22595 () | 4365649..4366401 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| DPQ29_RS22600 () | 4366401..4368185 | - | 1785 | WP_114523781.1 | KAP family P-loop domain protein | - |
| DPQ29_RS22615 () | 4368317..4369843 | - | 1527 | WP_205248123.1 | hypothetical protein | - |
| DPQ29_RS22620 () | 4370082..4370582 | - | 501 | WP_072145580.1 | type VI secretion protein ImpA | - |
| DPQ29_RS22625 () | 4370552..4370911 | - | 360 | WP_072172281.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| DPQ29_RS22630 () | 4371504..4371695 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| DPQ29_RS22635 () | 4371748..4371981 | - | 234 | WP_000124176.1 | hypothetical protein | - |
| DPQ29_RS22640 () | 4372077..4372576 | - | 500 | Protein_4150 | DNA-binding protein | - |
| DPQ29_RS22645 () | 4372927..4374045 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| DPQ29_RS22650 () | 4374185..4374871 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| DPQ29_RS22655 () | 4374926..4375684 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| DPQ29_RS22660 () | 4375668..4376393 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| DPQ29_RS22665 () | 4376405..4376674 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| DPQ29_RS22670 () | 4376702..4377199 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| DPQ29_RS22675 () | 4377228..4378424 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| DPQ29_RS22680 () | 4378709..4378990 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| DPQ29_RS22685 () | 4379012..4379797 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| DPQ29_RS22690 () | 4379858..4381375 | + | 1518 | WP_001773853.1 | Aldehyde-alcohol dehydrogenase | VF |
| DPQ29_RS22695 () | 4381399..4381698 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| DPQ29_RS22700 () | 4381709..4382284 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| DPQ29_RS22705 () | 4382333..4384885 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| DPQ29_RS22710 () | 4384994..4385911 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| DPQ29_RS22715 () | 4386048..4386953 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| DPQ29_RS22725 () | 4387565..4387934 | + | 370 | Protein_4166 | reverse transcriptase/maturase | - |
| DPQ29_RS22730 () | 4387934..4388527 | + | 594 | Protein_4167 | maturase | - |
| DPQ29_RS22740 () | 4389077..4390339 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| DPQ29_RS22745 () | 4390356..4391411 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| DPQ29_RS22750 () | 4391540..4392691 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| DPQ29_RS22755 () | 4392736..4393281 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| DPQ29_RS22760 () | 4393638..4393982 | - | 345 | Protein_4172 | Transposon Tn10 TetD protein | VF |
| DPQ29_RS26510 () | 4393954..4394604 | - | 651 | Protein_4173 | TetR/AcrR family transcriptional regulator | - |
| DPQ29_RS22775 () | 4394725..4395882 | - | 1158 | Protein_4174 | Multidrug resistance protein MexB | VF |
| DPQ29_RS22780 () | 4395973..4396239 | + | 267 | Protein_4175 | IS3 family transposase IS2 | Transposase |
| DPQ29_RS22785 () | 4396301..4396526 | - | 226 | Protein_4176 | hypothetical protein | - |
| DPQ29_RS22790 () | 4396538..4396771 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| DPQ29_RS22795 () | 4396840..4397415 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| DPQ29_RS22800 () | 4397762..4398493 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| DPQ29_RS22805 () | 4399946..4401169 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| DPQ29_RS22815 () | 4401270..4402154 | + | 885 | WP_001116801.1 | 50S ribosome-binding GTPase | - |
| DPQ29_RS22820 () | 4402357..4403037 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| DPQ29_RS22825 () | 4403185..4403862 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| DPQ29_RS22830 () | 4403868..4404101 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| DPQ29_RS22835 () | 4404191..4405009 | + | 819 | WP_001773857.1 | DUF945 domain-containing protein | - |
| DPQ29_RS22840 () | 4405100..4405585 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| DPQ29_RS22845 () | 4405601..4406077 | + | 477 | WP_001186786.1 | RadC family protein | - |
| DPQ29_RS22850 () | 4406140..4406361 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| DPQ29_RS22855 () | 4406524..4406892 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DPQ29_RS22860 () | 4406982..4407356 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| DPQ29_RS22865 () | 4407353..4407841 | + | 489 | WP_000777545.1 | hypothetical protein | - |
| DPQ29_RS22870 () | 4407853..4408050 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| DPQ29_RS22875 () | 4408147..4408716 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| DPQ29_RS22885 () | 4409465..4411003 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DPQ29_RS22895 () | 4411369..4412703 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DPQ29_RS22900 () | 4412783..4414930 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| DPQ29_RS22905 () | 4414989..4416446 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| DPQ29_RS22910 () | 4416683..4418200 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| DPQ29_RS22915 () | 4418319..4418492 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DPQ29_RS22920 () | 4418520..4418816 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DPQ29_RS22925 () | 4419045..4419317 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| DPQ29_RS22930 () | 4419329..4419559 | - | 231 | WP_000373293.1 | (4Fe-4S)-binding protein | - |
| DPQ29_RS22935 () | 4419740..4421371 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| DPQ29_RS22940 () | 4421368..4422087 | + | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|