NZ_CP0300251..100335

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 100335 bp
Accession: NZ_CP030025        Location: 1..100335         Organism: Salmonella enterica subsp. enterica serovar Ohio strain SA20120345       Replicon: plasmid pSA20120345.1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DOE64_RS24230 () 46..1077 + 1032 WP_000907873.1 replication initiation protein -
DOE64_RS24245 () 1986..2255 + 270 WP_000079941.1 hypothetical protein Antitoxin Detail
DOE64_RS24250 () 2252..2533 + 282 WP_000970007.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
DOE64_RS24255 () 2573..3421 + 849 WP_001057992.1 3'-5' exonuclease -
DOE64_RS24260 () 3538..4011 + 474 WP_001334658.1 hypothetical protein -
DOE64_RS24270 () 4488..4754 - 267 WP_000955263.1 hypothetical protein -
DOE64_RS24275 () 4754..5248 - 495 WP_001459505.1 hypothetical protein -
DOE64_RS24280 () 5304..5906 - 603 WP_000517695.1 hypothetical protein -
DOE64_RS24290 () 6260..7144 + 885 Protein_8 hypothetical protein -
DOE64_RS24295 () 7327..8589 + 1263 WP_000608644.1 IS1380-like element ISEc9 family transposase -
DOE64_RS24300 () 8913..10058 + 1146 WP_000976514.1 class C beta-lactamase CMY-2 -
DOE64_RS24305 () 10152..10685 + 534 WP_001221666.1 lipocalin family protein -
DOE64_RS24310 () 10682..10999 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
DOE64_RS24315 () 11051..11521 + 471 Protein_13 hypothetical protein -
DOE64_RS24320 () 11800..13680 + 1881 WP_001283341.1 colicin 1B -
DOE64_RS24325 () 13698..14045 - 348 WP_000762570.1 colicin 1B immunity protein -
DOE64_RS24330 () 14164..14511 + 348 WP_000142436.1 hypothetical protein -
DOE64_RS24335 () 14529..15119 - 591 WP_000194550.1 hypothetical protein -
DOE64_RS24340 () 15119..15373 - 255 WP_000343103.1 hypothetical protein -
DOE64_RS24345 () 15725..16726 + 1002 WP_000774875.1 DUF4238 domain-containing protein -
DOE64_RS24350 () 16902..17246 - 345 WP_000793307.1 hypothetical protein -
DOE64_RS24355 () 17745..17999 - 255 WP_000678527.1 hypothetical protein -
DOE64_RS24360 () 18044..18970 - 927 WP_001290416.1 hypothetical protein -
DOE64_RS24370 () 19528..19746 + 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
DOE64_RS24375 () 19748..20053 + 306 WP_001159869.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
DOE64_RS24380 () 20054..20860 + 807 WP_000016969.1 site-specific integrase -
DOE64_RS24385 () 21040..21684 + 645 WP_001144036.1 ParA family protein -
DOE64_RS24390 () 21771..22079 + 309 WP_000030199.1 hypothetical protein -
DOE64_RS24395 () 22493..23473 + 981 WP_000688514.1 plasmid segregation protein ParM -
DOE64_RS24400 () 23466..23882 + 417 WP_001278818.1 plasmid partitioning/stability family protein -
DOE64_RS24405 () 23884..25158 - 1275 WP_000457493.1 Y-family DNA polymerase -
DOE64_RS24410 () 25158..25595 - 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
DOE64_RS24415 () 25592..25840 - 249 WP_000618110.1 DinI-like family protein -
DOE64_RS24425 () 26258..27160 + 903 WP_000273918.1 DUF1281 domain-containing protein -
DOE64_RS24430 () 27157..27468 + 312 WP_010891263.1 hypothetical protein -
DOE64_RS24435 () 27545..28228 + 684 WP_000086178.1 DNA methylase -
DOE64_RS24440 () 28229..28450 + 222 WP_001104887.1 hypothetical protein -
DOE64_RS24445 () 28462..28896 + 435 WP_000274403.1 DUF1380 family protein -
DOE64_RS25005 () 28947..29717 + 771 WP_024133193.1 hypothetical protein -
DOE64_RS24460 () 30135..30560 + 426 WP_001198928.1 antirestriction protein -
DOE64_RS24465 () 30607..31029 + 423 WP_000271744.1 DUF1380 family protein -
DOE64_RS24470 () 31026..31217 + 192 WP_001027495.1 hypothetical protein -
DOE64_RS25125 () 31550..31618 - 69 Protein_42 pilus protein -
DOE64_RS24485 () 31987..32514 + 528 WP_001276116.1 single-stranded DNA-binding protein -
DOE64_RS24490 () 32572..32805 + 234 WP_000006012.1 DUF905 family protein -
DOE64_RS24495 () 32864..34822 + 1959 WP_001145458.1 ParB/RepB/Spo0J family partition protein -
DOE64_RS24500 () 34877..35311 + 435 WP_000845897.1 conjugation system SOS inhibitor PsiB -
DOE64_RS24505 () 35308..36027 + 720 WP_001276260.1 plasmid SOS inhibition protein A -
DOE64_RS24510 () 36157..37332 + 1176 WP_000942657.1 transposase -
DOE64_RS25130 () 37779..38279 + 501 WP_000117611.1 antirestriction protein ArdA -
DOE64_RS24530 () 39008..39442 + 435 WP_000218863.1 hypothetical protein -
DOE64_RS24535 () 39536..39802 + 267 WP_001247862.1 hypothetical protein -
DOE64_RS24540 () 39867..40769 + 903 WP_000038404.1 Rpn family recombination-promoting nuclease/putative transposase -
DOE64_RS24545 () 40769..41050 + 282 WP_001334682.1 hypothetical protein -
DOE64_RS24550 () 41081..41332 - 252 WP_000148286.1 helix-turn-helix domain-containing protein -
DOE64_RS24560 () 41913..42761 + 849 WP_001077027.1 DUF4942 domain-containing protein -
DOE64_RS24565 () 42847..43182 - 336 WP_000157086.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
DOE64_RS24570 () 43416..43748 + 333 WP_001283947.1 IncI1-type relaxosome accessory protein NikA -
DOE64_RS24575 () 43759..46458 + 2700 WP_001474686.1 IncI1-type relaxase NikB -
DOE64_RS24580 () 46495..48786 - 2292 WP_001289271.1 hypothetical protein -
DOE64_RS24585 () 48779..49849 - 1071 WP_000151575.1 IncI1-type conjugal transfer protein TrbB -
DOE64_RS24590 () 49868..51076 - 1209 WP_000121273.1 IncI1-type conjugal transfer protein TrbA -
DOE64_RS24595 () 51368..51520 + 153 WP_001303307.1 Hok/Gef family protein -
DOE64_RS24600 () 51592..51843 - 252 WP_001291965.1 hypothetical protein -
DOE64_RS24605 () 52204..52983 - 780 WP_001323403.1 IS21-like element IS100kyp family helper ATPase IstB -
DOE64_RS24610 () 52983..54005 - 1023 WP_001572805.1 IS21-like element IS100 family transposase -
DOE64_RS25135 () 54726..54902 - 177 WP_001054900.1 hypothetical protein -
DOE64_RS24625 () 55294..55503 + 210 WP_000062603.1 HEAT repeat domain-containing protein -
DOE64_RS24630 () 55575..56237 - 663 WP_000644794.1 plasmid IncI1-type surface exclusion protein ExcA -
DOE64_RS24635 () 56308..58476 - 2169 WP_000698368.1 DotA/TraY family protein -
DOE64_RS24640 () 58573..59157 - 585 WP_001037998.1 conjugal transfer protein TraX -
DOE64_RS24645 () 59186..60388 - 1203 WP_001189158.1 IncI1-type conjugal transfer protein TraW -
DOE64_RS24650 () 60355..60969 - 615 WP_000337394.1 IncI1-type conjugal transfer protein TraV -
DOE64_RS24655 () 60969..64013 - 3045 WP_001024751.1 IncI1-type conjugal transfer protein TraU -
DOE64_RS24660 () 64103..64903 - 801 WP_001164788.1 IncI1-type conjugal transfer protein TraT -
DOE64_RS24665 () 64887..65075 - 189 WP_001277255.1 putative conjugal transfer protein TraS -
DOE64_RS24670 () 65139..65543 - 405 WP_000086960.1 IncI1-type conjugal transfer protein TraR -
DOE64_RS24675 () 65594..66121 - 528 WP_001055569.1 conjugal transfer protein TraQ -
DOE64_RS24680 () 66121..66825 - 705 WP_000801920.1 IncI1-type conjugal transfer protein TraP -
DOE64_RS24685 () 66825..68114 - 1290 WP_001271997.1 conjugal transfer protein TraO -
DOE64_RS24690 () 68117..69100 - 984 WP_001191878.1 IncI1-type conjugal transfer protein TraN -
DOE64_RS24695 () 69111..69803 - 693 WP_000138552.1 DotI/IcmL family type IV secretion protein -
DOE64_RS24700 () 69800..70147 - 348 WP_001055900.1 conjugal transfer protein -
DOE64_RS24705 () 70165..73932 - 3768 WP_001141535.1 hypothetical protein -
DOE64_RS24710 () 74022..74573 - 552 WP_000014584.1 phospholipase D family protein -
DOE64_RS24715 () 74588..74878 - 291 WP_001299214.1 hypothetical protein -
DOE64_RS24720 () 74875..76023 - 1149 WP_001024972.1 plasmid transfer ATPase TraJ -
DOE64_RS24725 () 76020..76838 - 819 WP_000646097.1 IncI1-type conjugal transfer lipoprotein TraI -
DOE64_RS24730 () 76835..77293 - 459 WP_001079808.1 IncI1-type conjugal transfer lipoprotein TraH -
DOE64_RS24735 () 77688..78272 - 585 WP_000977517.1 histidine phosphatase family protein -
DOE64_RS24740 () 78332..79534 - 1203 WP_000976353.1 conjugal transfer protein TraF -
DOE64_RS24745 () 79620..80444 - 825 WP_001238927.1 hypothetical protein -
DOE64_RS24750 () 80595..81749 - 1155 WP_001139958.1 integrase -
DOE64_RS24765 () 82359..82556 + 198 WP_032159596.1 hypothetical protein -
DOE64_RS24770 () 82553..83977 - 1425 WP_023278060.1 shufflon system plasmid conjugative transfer pilus tip adhesin PilV -
DOE64_RS24775 () 83977..84633 - 657 WP_001193553.1 prepilin peptidase -
DOE64_RS24780 () 84618..85178 - 561 WP_000014116.1 lytic transglycosylase domain-containing protein -
DOE64_RS24785 () 85188..85802 - 615 WP_000959785.1 pilus assembly protein PilX -
DOE64_RS24790 () 85820..86917 - 1098 WP_001208805.1 type II secretion system F family protein -
DOE64_RS24795 () 86930..88483 - 1554 WP_000362202.1 Flp pilus assembly complex ATPase component TadA -
DOE64_RS24800 () 88494..88946 - 453 WP_001247336.1 type IV pilus biogenesis protein PilP -
DOE64_RS24805 () 88933..90228 - 1296 WP_000752774.1 type 4b pilus protein PilO2 -
DOE64_RS24810 () 90221..91903 - 1683 WP_000748143.1 PilN family type IVB pilus formation outer membrane protein -
DOE64_RS24815 () 91917..92354 - 438 WP_000539807.1 type IV pilus biogenesis protein PilM -
DOE64_RS24820 () 92354..93421 - 1068 WP_000742600.1 type IV pilus biogenesis lipoprotein PilL -
DOE64_RS24825 () 93576..94804 + 1229 WP_088895425.1 IS3-like element IS2 family transposase -
DOE64_RS24835 () 95431..95883 - 453 WP_000008892.1 hypothetical protein -
DOE64_RS24840 () 95926..96180 - 255 WP_001136192.1 PilI type IV pilus biogenesis protein -
DOE64_RS24845 () 96448..97014 - 567 WP_000776428.1 hypothetical protein -
DOE64_RS24850 () 97028..97711 - 684 WP_000213857.1 conjugal transfer protein TraC -
DOE64_RS24860 () 97965..98498 - 534 WP_001303319.1 transcription termination factor NusG -
DOE64_RS24870 () 98940..99227 - 288 WP_000074849.1 conjugal transfer protein TraA -
DOE64_RS24875 () 99145..99408 - 264 WP_001324596.1 ash family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance