MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 121189 bp
Accession: NZ_CP029990 Location: 1..121189 Organism: Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 Replicon: plasmid pSA20121591.1
Accession: NZ_CP029990 Location: 1..121189 Organism: Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 Replicon: plasmid pSA20121591.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DOE59_RS25690 () | 191..964 | - | 774 | WP_154715032.1 | hypothetical protein | - |
| DOE59_RS25695 () | 1040..1453 | - | 414 | WP_154715033.1 | DUF1380 family protein | - |
| DOE59_RS25700 () | 1504..1725 | - | 222 | WP_154715034.1 | hypothetical protein | - |
| DOE59_RS25705 () | 1725..2426 | - | 702 | WP_154715035.1 | DNA methylase | - |
| DOE59_RS25710 () | 2799..3158 | - | 360 | WP_080102281.1 | hypothetical protein | - |
| DOE59_RS25715 () | 3151..3384 | - | 234 | WP_080102290.1 | hypothetical protein | - |
| DOE59_RS25720 () | 3422..4330 | - | 909 | WP_170914568.1 | DUF1281 domain-containing protein | - |
| DOE59_RS25725 () | 4754..5095 | - | 342 | WP_154715036.1 | hypothetical protein | - |
| DOE59_RS25730 () | 5181..5825 | - | 645 | WP_154715037.1 | ABC transporter | - |
| DOE59_RS25735 () | 5828..6796 | - | 969 | WP_170914567.1 | StbA family protein | - |
| DOE59_RS25740 () | 7099..7527 | + | 429 | WP_115400668.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DOE59_RS25745 () | 7527..8798 | + | 1272 | WP_154715038.1 | Y-family DNA polymerase | - |
| DOE59_RS25750 () | 9013..9351 | - | 339 | WP_024262131.1 | hypothetical protein | - |
| DOE59_RS25755 () | 9443..10084 | - | 642 | WP_000511281.1 | ParA family protein | - |
| DOE59_RS25760 () | 10601..11485 | + | 885 | WP_154715039.1 | RepB family plasmid replication initiator protein | - |
| DOE59_RS25765 () | 11713..12495 | - | 783 | WP_000082171.1 | site-specific integrase | - |
| DOE59_RS25770 () | 12530..13678 | - | 1149 | WP_154715040.1 | 3'-5' exonuclease | - |
| DOE59_RS25775 () | 13675..13965 | - | 291 | WP_080102270.1 | cytoplasmic protein | - |
| DOE59_RS25780 () | 13967..14272 | - | 306 | WP_154715041.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DOE59_RS25785 () | 14274..14492 | - | 219 | WP_080102268.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DOE59_RS25790 () | 15087..15344 | + | 258 | WP_154715042.1 | hypothetical protein | - |
| DOE59_RS25795 () | 15344..16300 | + | 957 | WP_154715043.1 | hypothetical protein | - |
| DOE59_RS25800 () | 16334..16471 | + | 138 | WP_154715044.1 | hypothetical protein | - |
| DOE59_RS25805 () | 16666..18018 | - | 1353 | WP_154715045.1 | hypothetical protein | - |
| DOE59_RS25810 () | 18344..18880 | - | 537 | WP_080102288.1 | hypothetical protein | - |
| DOE59_RS25815 () | 19480..19641 | + | 162 | WP_154715046.1 | hypothetical protein | - |
| DOE59_RS25820 () | 19645..20676 | - | 1032 | WP_114047679.1 | replication initiation protein | - |
| DOE59_RS25825 () | 21848..22126 | + | 279 | WP_080102259.1 | LuxR C-terminal-related transcriptional regulator | - |
| DOE59_RS25830 () | 22570..23094 | + | 525 | WP_080102257.1 | transcription termination factor NusG | - |
| DOE59_RS25835 () | 23375..24076 | + | 702 | WP_114047676.1 | DUF2913 family protein | - |
| DOE59_RS25840 () | 24113..24691 | + | 579 | WP_154715047.1 | hypothetical protein | - |
| DOE59_RS25845 () | 24762..25034 | + | 273 | WP_114047674.1 | PilI type IV pilus biogenesis protein | - |
| DOE59_RS25850 () | 25093..26160 | + | 1068 | WP_154715048.1 | TcpQ domain-containing protein | - |
| DOE59_RS25855 () | 26160..26597 | + | 438 | WP_154715049.1 | type IV pilus biogenesis protein PilM | - |
| DOE59_RS25860 () | 26611..28293 | + | 1683 | WP_154715050.1 | PilN family type IVB pilus formation outer membrane protein | - |
| DOE59_RS25865 () | 28286..29587 | + | 1302 | WP_154715051.1 | type 4b pilus protein PilO2 | - |
| DOE59_RS25870 () | 29574..30026 | + | 453 | WP_154715052.1 | type IV pilus biogenesis protein PilP | - |
| DOE59_RS25875 () | 30037..31590 | + | 1554 | WP_080102248.1 | Flp pilus assembly complex ATPase component TadA | - |
| DOE59_RS25880 () | 31603..32700 | + | 1098 | WP_114047669.1 | type II secretion system F family protein | - |
| DOE59_RS25885 () | 32718..33335 | + | 618 | WP_080102244.1 | pilus assembly protein PilX | - |
| DOE59_RS25890 () | 33345..33905 | + | 561 | WP_154715053.1 | lytic transglycosylase domain-containing protein | - |
| DOE59_RS25895 () | 33890..34546 | + | 657 | WP_114047666.1 | prepilin peptidase | - |
| DOE59_RS25900 () | 34546..35874 | + | 1329 | WP_080102286.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DOE59_RS25905 () | 36277..37101 | + | 825 | WP_154715054.1 | conjugal transfer protein TraE | - |
| DOE59_RS25910 () | 37188..38390 | + | 1203 | WP_154715055.1 | conjugal transfer protein TraF | - |
| DOE59_RS25915 () | 38911..39366 | + | 456 | WP_114047663.1 | DotD/TraH family lipoprotein | - |
| DOE59_RS25920 () | 39363..40196 | + | 834 | WP_080102237.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DOE59_RS25925 () | 40340..41488 | + | 1149 | WP_114047662.1 | plasmid transfer ATPase TraJ | - |
| DOE59_RS25930 () | 41790..42347 | + | 558 | WP_154715056.1 | phospholipase D family protein | - |
| DOE59_RS25935 () | 42627..46178 | + | 3552 | WP_154715057.1 | DNA primase | - |
| DOE59_RS25940 () | 46196..46546 | + | 351 | WP_080102233.1 | conjugal transfer protein | - |
| DOE59_RS25945 () | 46558..47244 | + | 687 | WP_172953678.1 | DotI/IcmL family type IV secretion protein | - |
| DOE59_RS25950 () | 47260..48243 | + | 984 | WP_154715058.1 | conjugal transfer protein TraN | - |
| DOE59_RS25955 () | 48246..49547 | + | 1302 | WP_154715059.1 | conjugal transfer protein TraO | - |
| DOE59_RS25960 () | 49544..50257 | + | 714 | WP_080102230.1 | conjugal transfer protein TraP | - |
| DOE59_RS25965 () | 50257..50784 | + | 528 | WP_080102229.1 | conjugal transfer protein TraQ | - |
| DOE59_RS25970 () | 50827..51231 | + | 405 | WP_080102228.1 | conjugal transfer protein TraR | - |
| DOE59_RS25975 () | 51300..51488 | + | 189 | WP_000556965.1 | hypothetical protein | - |
| DOE59_RS25980 () | 51472..52272 | + | 801 | WP_080102227.1 | conjugal transfer protein TraT | - |
| DOE59_RS25985 () | 52370..55414 | + | 3045 | WP_154715060.1 | ATP-binding protein | - |
| DOE59_RS25990 () | 55414..56043 | + | 630 | WP_154715061.1 | conjugal transfer protein TraV | - |
| DOE59_RS25995 () | 56001..57203 | + | 1203 | WP_154715062.1 | conjugal transfer protein TraW | - |
| DOE59_RS26000 () | 57200..57451 | + | 252 | WP_154715063.1 | hypothetical protein | - |
| DOE59_RS26005 () | 57444..58028 | + | 585 | WP_154715064.1 | conjugal transfer protein TraX | - |
| DOE59_RS26010 () | 58127..60298 | + | 2172 | WP_154715065.1 | DotA/TraY family protein | - |
| DOE59_RS26015 () | 60373..60987 | + | 615 | WP_172953682.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DOE59_RS26020 () | 61205..61414 | + | 210 | WP_080102219.1 | hemolysin expression modulator Hha | - |
| DOE59_RS26025 () | 61969..62283 | - | 315 | WP_154715067.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| DOE59_RS26030 () | 62276..62620 | - | 345 | WP_080102217.1 | toxin | Toxin Detail |
| DOE59_RS26035 () | 62768..63976 | + | 1209 | WP_154715068.1 | IncI1-type conjugal transfer protein TrbA | - |
| DOE59_RS26040 () | 63994..65076 | + | 1083 | WP_154715069.1 | DsbC family protein | - |
| DOE59_RS26045 () | 65069..67267 | + | 2199 | Protein_71 | conjugal transfer protein TrbC | - |
| DOE59_RS26050 () | 67450..67751 | + | 302 | Protein_72 | transposase | - |
| DOE59_RS26055 () | 67833..68636 | - | 804 | WP_154715104.1 | transporter substrate-binding domain-containing protein | - |
| DOE59_RS26060 () | 69254..69634 | - | 381 | WP_154715070.1 | hypothetical protein | - |
| DOE59_RS26065 () | 69686..70027 | - | 342 | WP_080102214.1 | DsrE family protein | - |
| DOE59_RS26500 () | 70060..70455 | - | 396 | Protein_76 | thiol:disulfide interchange protein DsbG | - |
| DOE59_RS26075 () | 70599..70862 | - | 264 | WP_172953679.1 | FkbM family methyltransferase | - |
| DOE59_RS26080 () | 70855..71304 | - | 450 | WP_154715073.1 | FkbM family methyltransferase | - |
| DOE59_RS26085 () | 71301..71726 | - | 426 | WP_154715074.1 | LuxR C-terminal-related transcriptional regulator | - |
| DOE59_RS26090 () | 71723..72175 | - | 453 | WP_154715075.1 | CaiF/GrlA family transcriptional regulator | - |
| DOE59_RS26095 () | 72168..72539 | - | 372 | WP_154715076.1 | hypothetical protein | - |
| DOE59_RS26100 () | 72549..73055 | - | 507 | WP_154715077.1 | DUF2919 family protein | - |
| DOE59_RS26105 () | 73052..75037 | - | 1986 | WP_154715105.1 | cobalt ABC transporter permease | - |
| DOE59_RS26110 () | 78586..81273 | - | 2688 | Protein_84 | filamentous hemagglutinin N-terminal domain-containing protein | - |
| DOE59_RS26115 () | 81307..83124 | - | 1818 | WP_172953680.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| DOE59_RS26120 () | 84134..84733 | + | 600 | WP_154715078.1 | fimbrial protein | - |
| DOE59_RS26125 () | 85143..87632 | + | 2490 | WP_023222792.1 | fimbria/pilus outer membrane usher protein | - |
| DOE59_RS26130 () | 87662..88417 | + | 756 | WP_023222793.1 | fimbria/pilus periplasmic chaperone | - |
| DOE59_RS26135 () | 88449..89588 | + | 1140 | WP_154715079.1 | hypothetical protein | - |
| DOE59_RS26140 () | 89677..90153 | + | 477 | WP_023222795.1 | CaiF/GrlA family transcriptional regulator | - |
| DOE59_RS26145 () | 90156..91028 | + | 873 | WP_154715080.1 | LuxR C-terminal-related transcriptional regulator | - |
| DOE59_RS26150 () | 91427..92971 | + | 1545 | WP_154715081.1 | IS3 family transposase | - |
| DOE59_RS26155 () | 93019..93537 | - | 519 | Protein_93 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| DOE59_RS26160 () | 93580..93960 | - | 381 | WP_154715082.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DOE59_RS26165 () | 93947..94276 | - | 330 | WP_154715083.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DOE59_RS26170 () | 94362..94538 | - | 177 | WP_154715084.1 | hypothetical protein | - |
| DOE59_RS26175 () | 94708..95019 | + | 312 | WP_154715085.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DOE59_RS26180 () | 95016..95297 | + | 282 | WP_154715086.1 | helix-turn-helix transcriptional regulator | - |
| DOE59_RS26185 () | 95415..95690 | - | 276 | Protein_99 | transposase | - |
| DOE59_RS26190 () | 96305..96481 | - | 177 | WP_154715087.1 | hypothetical protein | - |
| DOE59_RS26195 () | 97178..98155 | + | 978 | WP_154715088.1 | ABC transporter substrate-binding protein | - |
| DOE59_RS26200 () | 98169..99869 | + | 1701 | WP_154715089.1 | iron ABC transporter permease | - |
| DOE59_RS26205 () | 99857..100882 | + | 1026 | WP_154715090.1 | ABC transporter ATP-binding protein | - |
| DOE59_RS26210 () | 101034..102218 | + | 1185 | Protein_104 | IS256 family transposase | - |
| DOE59_RS26220 () | 102346..102600 | - | 255 | WP_154715091.1 | hypothetical protein | - |
| DOE59_RS26225 () | 103033..103155 | - | 123 | Protein_106 | IS110 family transposase | - |
| DOE59_RS26230 () | 103224..104202 | - | 979 | Protein_107 | IS3 family transposase | - |
| DOE59_RS26235 () | 104337..105200 | - | 864 | WP_154715107.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| DOE59_RS26240 () | 105470..108169 | - | 2700 | WP_154715092.1 | IncI1-type relaxase NikB | - |
| DOE59_RS26245 () | 108179..108511 | - | 333 | WP_080102196.1 | nikA protein | - |
| DOE59_RS26250 () | 108744..109079 | + | 336 | WP_154715093.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DOE59_RS26255 () | 109166..110014 | - | 849 | WP_154715094.1 | DUF4942 domain-containing protein | - |
| DOE59_RS26260 () | 110627..110878 | + | 252 | WP_154715095.1 | helix-turn-helix domain-containing protein | - |
| DOE59_RS26265 () | 110920..111096 | - | 177 | WP_172953681.1 | hypothetical protein | - |
| DOE59_RS26270 () | 111155..112051 | - | 897 | WP_154715097.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DOE59_RS26275 () | 112116..112382 | - | 267 | WP_114047632.1 | hypothetical protein | - |
| DOE59_RS26280 () | 112476..112910 | - | 435 | WP_154715098.1 | post-segregation killing protein PndC | - |
| DOE59_RS26285 () | 113028..113582 | + | 555 | WP_154715099.1 | hypothetical protein | - |
| DOE59_RS26290 () | 113616..114116 | - | 501 | Protein_119 | antirestriction protein ArdA | - |
| DOE59_RS26295 () | 114142..114421 | - | 280 | Protein_120 | DUF1472 domain-containing protein | - |
| DOE59_RS26300 () | 114592..114909 | - | 318 | WP_114047628.1 | theronine dehydrogenase | - |
| DOE59_RS26305 () | 114906..115646 | - | 741 | WP_154715100.1 | plasmid SOS inhibition protein A | - |
| DOE59_RS26310 () | 115643..116077 | - | 435 | WP_154715101.1 | conjugation system SOS inhibitor PsiB | - |
| DOE59_RS26315 () | 116118..118139 | - | 2022 | WP_154715102.1 | ParB/RepB/Spo0J family partition protein | - |
| DOE59_RS26320 () | 118216..118458 | - | 243 | WP_080102323.1 | DUF905 domain-containing protein | - |
| DOE59_RS26325 () | 118513..119040 | - | 528 | WP_080102321.1 | single-stranded DNA-binding protein | - |
| DOE59_RS26330 () | 119819..120010 | - | 192 | WP_080102344.1 | hypothetical protein | - |
| DOE59_RS26335 () | 120007..120429 | - | 423 | WP_080102343.1 | DUF1380 family protein | - |
| DOE59_RS26340 () | 120476..120910 | - | 435 | WP_080102342.1 | antirestriction protein | - |
| DOE59_RS26345 () | 120873..121176 | - | 304 | Protein_130 | DUF1472 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|