Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/MqsA(antitoxin)
Location 61969..62620 Replicon plasmid pSA20121591.1
Accession NZ_CP029990
Organism Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591

Toxin (Protein)


Gene name higB Uniprot ID -
Locus tag DOE59_RS26030 Protein ID WP_080102217.1
Coordinates 62276..62620 (-) Length 115 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag DOE59_RS26025 Protein ID WP_154715067.1
Coordinates 61969..62283 (-) Length 105 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DOE59_RS26000 57200..57451 + 252 WP_154715063.1 hypothetical protein -
DOE59_RS26005 57444..58028 + 585 WP_154715064.1 conjugal transfer protein TraX -
DOE59_RS26010 58127..60298 + 2172 WP_154715065.1 DotA/TraY family protein -
DOE59_RS26015 60373..60987 + 615 WP_172953682.1 plasmid IncI1-type surface exclusion protein ExcA -
DOE59_RS26020 61205..61414 + 210 WP_080102219.1 hemolysin expression modulator Hha -
DOE59_RS26025 61969..62283 - 315 WP_154715067.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
DOE59_RS26030 62276..62620 - 345 WP_080102217.1 toxin Toxin
DOE59_RS26035 62768..63976 + 1209 WP_154715068.1 IncI1-type conjugal transfer protein TrbA -
DOE59_RS26040 63994..65076 + 1083 WP_154715069.1 DsbC family protein -
DOE59_RS26045 65069..67267 + 2199 Protein_71 conjugal transfer protein TrbC -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..121189 121189


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Bacterial antitoxin of type II TA system, VapB

(3-44)


Sequences

Toxin        


Download         Length: 115 a.a.        Molecular weight: 16943.32 Da        Isoelectric Point: 5.5500

>T106833 WP_080102217.1 NZ_CP029990:c62620-62276 [Salmonella enterica subsp. diarizonae serovar 48:i:z]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF

Download         Length: 345 bp

>T106833 NZ_CP029990:c62620-62276 [Salmonella enterica subsp. diarizonae serovar 48:i:z]
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTT

Antitoxin


Download         Length: 105 a.a.        Molecular weight: 15471.56 Da        Isoelectric Point: 5.5500

>AT106833 WP_154715067.1 NZ_CP029990:c62283-61969 [Salmonella enterica subsp. diarizonae serovar 48:i:z]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFFFFFFFF

Download         Length: 315 bp

>AT106833 NZ_CP029990:c62283-61969 [Salmonella enterica subsp. diarizonae serovar 48:i:z]
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References