MGE detailed information
MGE type: Conjugative plasmid MGE length: 108148 bp
Accession: NZ_CP029731 Location: 1..108148 Organism: Citrobacter sp. CRE-46 strain AR_0157 Replicon: plasmid unnamed3
Accession: NZ_CP029731 Location: 1..108148 Organism: Citrobacter sp. CRE-46 strain AR_0157 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN232_RS28795 () | 323..1354 | + | 1032 | WP_001752311.1 | IS630 family transposase ISEc33 | Transposase |
| AN232_RS31655 () | 1567..2472 | - | 906 | WP_162620752.1 | hypothetical protein | - |
| AN232_RS28800 () | 2572..3603 | - | 1032 | WP_001752311.1 | IS630 family transposase ISEc33 | Transposase |
| AN232_RS28805 () | 3700..6903 | - | 3204 | WP_110498894.1 | CDP-glycerol glycerophosphotransferase family protein | - |
| AN232_RS28810 () | 6896..8002 | - | 1107 | WP_110498895.1 | Stealth CR1 domain-containing protein | - |
| AN232_RS28815 () | 8171..9139 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| AN232_RS28820 () | 9522..10727 | + | 1206 | WP_015493083.1 | Plasmid partition protein A | VF |
| AN232_RS28825 () | 10724..11695 | + | 972 | WP_016479949.1 | ParB/RepB/Spo0J family partition protein | - |
| AN232_RS28835 () | 11831..13102 | - | 1272 | WP_015493081.1 | Y-family DNA polymerase | - |
| AN232_RS28840 () | 13102..13524 | - | 423 | WP_015493080.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AN232_RS28845 () | 13584..14804 | - | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| AN232_RS28850 () | 15028..15699 | - | 672 | WP_015493079.1 | SOS response-associated peptidase family protein | - |
| AN232_RS28855 () | 16058..16735 | + | 678 | WP_002211749.1 | DNA methylase | - |
| AN232_RS28860 () | 16735..16956 | + | 222 | WP_015493077.1 | hypothetical protein | - |
| AN232_RS28865 () | 16967..17386 | + | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| AN232_RS28870 () | 17440..18219 | + | 780 | WP_015493075.1 | hypothetical protein | - |
| AN232_RS28875 () | 18624..19130 | + | 507 | WP_015493074.1 | antirestriction protein ArdA | - |
| AN232_RS28880 () | 19173..19364 | + | 192 | WP_015493073.1 | hypothetical protein | - |
| AN232_RS28885 () | 19557..19811 | + | 255 | WP_015493072.1 | DNA polymerase III subunit theta | - |
| AN232_RS28890 () | 19846..20163 | + | 318 | Protein_20 | hypothetical protein | - |
| AN232_RS31660 () | 20202..20504 | - | 303 | WP_032072909.1 | hypothetical protein | - |
| AN232_RS28895 () | 20789..21019 | + | 231 | WP_015493071.1 | DUF905 domain-containing protein | - |
| AN232_RS28900 () | 21090..23099 | + | 2010 | WP_016479992.1 | ParB/RepB/Spo0J family partition protein | - |
| AN232_RS28905 () | 23142..23573 | + | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| AN232_RS28910 () | 23570..24298 | + | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| AN232_RS28915 () | 24295..24618 | + | 324 | WP_008324183.1 | hypothetical protein | - |
| AN232_RS28920 () | 24680..25039 | + | 360 | WP_015493069.1 | hypothetical protein | - |
| AN232_RS28925 () | 25666..26040 | + | 375 | WP_008324180.1 | hypothetical protein | - |
| AN232_RS28930 () | 26094..26381 | + | 288 | WP_008324178.1 | hypothetical protein | - |
| AN232_RS28935 () | 26428..26772 | + | 345 | WP_008324177.1 | hypothetical protein | - |
| AN232_RS28940 () | 26858..27121 | + | 264 | WP_008324174.1 | hypothetical protein | - |
| AN232_RS28945 () | 27164..27994 | + | 831 | WP_008324171.1 | type I restriction-modification system subunit M | - |
| AN232_RS28950 () | 28621..29151 | + | 531 | WP_008324170.1 | antirestriction protein | - |
| AN232_RS28955 () | 29198..29674 | - | 477 | WP_008324168.1 | hypothetical protein | VF |
| AN232_RS28960 () | 30106..30498 | + | 393 | WP_008324167.1 | relaxosome protein TraM | - |
| AN232_RS28965 () | 30687..31376 | + | 690 | WP_008324166.1 | hypothetical protein | - |
| AN232_RS28970 () | 31463..31687 | + | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| AN232_RS28975 () | 31745..32095 | + | 351 | WP_016247536.1 | type IV conjugative transfer system pilin TraA | - |
| AN232_RS28980 () | 32246..32551 | + | 306 | WP_008324160.1 | type IV conjugative transfer system protein TraL | - |
| AN232_RS28985 () | 32566..33132 | + | 567 | WP_016247535.1 | type IV conjugative transfer system protein TraE | - |
| AN232_RS28990 () | 33119..33862 | + | 744 | WP_008324157.1 | type-F conjugative transfer system secretin TraK | - |
| AN232_RS28995 () | 33849..35243 | + | 1395 | WP_016479986.1 | conjugal transfer protein TraB | - |
| AN232_RS29000 () | 35265..35804 | + | 540 | WP_016247533.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AN232_RS29005 () | 35924..36148 | + | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| AN232_RS29010 () | 36152..36337 | + | 186 | WP_008324139.1 | hypothetical protein | - |
| AN232_RS29015 () | 36321..36722 | + | 402 | WP_016479985.1 | hypothetical protein | - |
| AN232_RS29020 () | 36712..37278 | + | 567 | WP_008324135.1 | conjugal transfer protein TraP | - |
| AN232_RS29025 () | 37271..39901 | + | 2631 | WP_008324134.1 | type IV secretion system protein TraC | - |
| AN232_RS29030 () | 39898..40245 | + | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| AN232_RS29035 () | 40245..40892 | + | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| AN232_RS29040 () | 40895..41881 | + | 987 | WP_042934586.1 | conjugal transfer pilus assembly protein TraU | - |
| AN232_RS29045 () | 41898..42527 | + | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AN232_RS29050 () | 42524..44377 | + | 1854 | WP_016479983.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AN232_RS29055 () | 44409..44597 | + | 189 | WP_008324128.1 | hypothetical protein | - |
| AN232_RS29060 () | 44628..45377 | + | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AN232_RS29065 () | 45394..45642 | + | 249 | WP_016479982.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AN232_RS29070 () | 45632..46186 | + | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AN232_RS29075 () | 46179..46607 | + | 429 | WP_008324122.1 | hypothetical protein | - |
| AN232_RS29080 () | 46594..47964 | + | 1371 | WP_016247527.1 | conjugal transfer protein TraH | - |
| AN232_RS29085 () | 47964..50786 | + | 2823 | WP_008324119.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AN232_RS29090 () | 50808..51239 | + | 432 | WP_008324118.1 | entry exclusion protein | - |
| AN232_RS29095 () | 51314..51989 | + | 676 | Protein_62 | Sel1-repeat-containing protein YbeT | VF |
| AN232_RS29100 () | 52123..54369 | + | 2247 | WP_016479979.1 | type IV conjugative transfer system coupling protein TraD | - |
| AN232_RS29105 () | 54369..59609 | + | 5241 | WP_016479978.1 | Multifunctional conjugation protein TraI | Relaxase |
| AN232_RS29110 () | 59611..60348 | + | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| AN232_RS29115 () | 60415..61134 | + | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| AN232_RS29120 () | 61127..61918 | + | 792 | WP_110498896.1 | DsbA family protein | - |
| AN232_RS29125 () | 62066..62611 | + | 546 | WP_008324931.1 | Phospholipase D | VF |
| AN232_RS29130 () | 62763..63041 | + | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| AN232_RS29140 () | 63260..63337 | + | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| AN232_RS29145 () | 63330..64193 | + | 864 | WP_016247520.1 | incFII family plasmid replication initiator RepA | - |
| AN232_RS31665 () | 65052..65198 | - | 147 | WP_032072915.1 | hypothetical protein | - |
| AN232_RS29170 () | 65337..66185 | + | 849 | WP_032072916.1 | hypothetical protein | - |
| AN232_RS29175 () | 66245..66529 | + | 285 | WP_032072917.1 | hypothetical protein | - |
| AN232_RS29180 () | 66618..66911 | + | 294 | WP_032072918.1 | hypothetical protein | - |
| AN232_RS29185 () | 66926..67516 | + | 591 | WP_064762226.1 | hypothetical protein | - |
| AN232_RS29190 () | 67543..68124 | + | 582 | WP_045265539.1 | DUF2913 family protein | - |
| AN232_RS29195 () | 68568..69125 | - | 558 | WP_110498897.1 | hypothetical protein | - |
| AN232_RS29200 () | 69253..69630 | - | 378 | Protein_79 | restriction endonuclease | - |
| AN232_RS29205 () | 69777..70757 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| AN232_RS31895 () | 70961..71116 | + | 156 | WP_000074143.1 | hypothetical protein | - |
| AN232_RS29210 () | 71165..72157 | + | 993 | WP_001145102.1 | hypothetical protein | - |
| AN232_RS29215 () | 72226..73101 | + | 876 | Protein_83 | IS5 family transposase ISKpn26 | Transposase |
| AN232_RS29220 () | 73310..73969 | - | 660 | WP_032072920.1 | endonuclease III | - |
| AN232_RS29230 () | 74351..74902 | - | 552 | Protein_85 | DNA cytosine methyltransferase | - |
| AN232_RS29240 () | 75519..75818 | + | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| AN232_RS29245 () | 75902..76144 | - | 243 | WP_000376617.1 | hypothetical protein | - |
| AN232_RS29255 () | 76272..77111 | - | 840 | WP_032072921.1 | Dihydropteroate synthase | ARG |
| AN232_RS29260 () | 77105..77173 | - | 69 | Protein_89 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| AN232_RS29265 () | 77490..78455 | - | 966 | WP_015460530.1 | TniQ family protein | - |
| AN232_RS29270 () | 78457..79389 | - | 933 | WP_015460531.1 | TniB family NTP-binding protein | - |
| AN232_RS29275 () | 79386..80072 | - | 687 | WP_016479967.1 | Mu transposase C-terminal domain-containing protein | - |
| AN232_RS29280 () | 80106..80867 | - | 762 | WP_032072922.1 | DDE-type integrase/transposase/recombinase | - |
| AN232_RS29290 () | 81610..83139 | + | 1530 | WP_003149906.1 | IS91 family transposase ISVsa3 | Transposase |
| AN232_RS29300 () | 83436..84281 | + | 846 | WP_000855769.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| AN232_RS29305 () | 84644..84763 | + | 120 | Protein_96 | IS30 family transposase | - |
| AN232_RS29310 () | 84773..85522 | + | 750 | Protein_97 | IS3 family transposase ISEhe3 | Transposase |
| AN232_RS29315 () | 85669..86685 | - | 1017 | WP_087728544.1 | IS5 family transposase IS5D | Transposase |
| AN232_RS29325 () | 86817..87347 | - | 531 | WP_016479963.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AN232_RS29330 () | 87351..87620 | - | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AN232_RS29335 () | 88476..89465 | + | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| AN232_RS29340 () | 89761..90500 | - | 740 | Protein_102 | site-specific integrase | - |
| AN232_RS29345 () | 90982..91134 | + | 153 | Protein_103 | IS5 family transposase IS5B | Transposase |
| AN232_RS29355 () | 91206..92326 | + | 1121 | WP_089046468.1 | IS3 family transposase ISSen4 | Transposase |
| AN232_RS29360 () | 92355..93101 | + | 747 | Protein_105 | IS5 family transposase IS5D | Transposase |
| AN232_RS29370 () | 93263..94585 | + | 1323 | WP_016479957.1 | GntP family transporter | - |
| AN232_RS29375 () | 94784..95575 | - | 792 | WP_008322208.1 | site-specific integrase | - |
| AN232_RS29380 () | 95565..95879 | - | 315 | WP_008322211.1 | hypothetical protein | - |
| AN232_RS29385 () | 95881..96186 | - | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AN232_RS29390 () | 96188..96406 | - | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AN232_RS29395 () | 97268..97965 | - | 698 | Protein_111 | IS1 family transposase | - |
| AN232_RS29405 () | 98022..98222 | + | 201 | Protein_112 | IS30 family transposase | - |
| AN232_RS29410 () | 98323..99135 | + | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| AN232_RS29415 () | 99139..99504 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| AN232_RS29420 () | 99509..100147 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| AN232_RS29425 () | 100158..101189 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| AN232_RS29430 () | 101194..101523 | - | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| AN232_RS29435 () | 101717..102007 | + | 291 | WP_004201172.1 | co-chaperone GroES | - |
| AN232_RS29440 () | 102063..103703 | + | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| AN232_RS29445 () | 103892..105421 | + | 1530 | WP_015056392.1 | IS91 family transposase ISVsa3 | Transposase |
| AN232_RS29455 () | 105632..105916 | - | 285 | WP_015056391.1 | hypothetical protein | - |
| AN232_RS29460 () | 106213..106910 | - | 698 | Protein_122 | IS1 family transposase IS1X2 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|