MGE detailed information
MGE type: Prophage MGE length: 41575 bp
Accession: NZ_CP029658 Location: 1072756..1114330 Organism: Staphylococcus aureus strain AR_0467 Replicon: chromosome
Accession: NZ_CP029658 Location: 1072756..1114330 Organism: Staphylococcus aureus strain AR_0467 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC52_RS05880 () | 1070527..1071468 | + | 942 | WP_110184177.1 | 3'-5' exoribonuclease YhaM | - |
| CSC52_RS05885 () | 1071589..1072551 | - | 963 | WP_000782121.1 | foldase | - |
| CSC52_RS05890 () | 1072756..1073313 | - | 558 | WP_110184178.1 | DUF3267 domain-containing protein | - |
| CSC52_RS05895 () | 1074048..1074413 | - | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| CSC52_RS05900 () | 1074555..1074977 | - | 423 | WP_000004981.1 | HIT family protein | - |
| CSC52_RS05905 () | 1075111..1075851 | + | 741 | WP_000216874.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| CSC52_RS05910 () | 1075844..1077067 | + | 1224 | WP_000551836.1 | ABC transporter permease | - |
| CSC52_RS05915 () | 1077191..1077694 | - | 504 | WP_110184179.1 | signal transduction protein TRAP | - |
| CSC52_RS05920 () | 1077857..1077967 | + | 111 | WP_001790154.1 | hypothetical protein | - |
| CSC52_RS05925 () | 1077957..1078994 | + | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| CSC52_RS05930 () | 1079052..1079975 | + | 924 | WP_000162881.1 | ferrochelatase | - |
| CSC52_RS05935 () | 1079999..1081399 | + | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| CSC52_RS05945 () | 1081722..1082276 | + | 555 | WP_110184180.1 | alpha/beta hydrolase | - |
| CSC52_RS05990 () | 1083636..1084418 | + | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| CSC52_RS05995 () | 1084699..1085418 | + | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| CSC52_RS06000 () | 1085453..1086181 | + | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| CSC52_RS15545 () | 1086335..1087106 | + | 772 | Protein_1083 | Enterotoxin type B | VF |
| CSC52_RS06015 () | 1087145..1087900 | + | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| CSC52_RS06020 () | 1088183..1088959 | + | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| CSC52_RS06030 () | 1089511..1090287 | - | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| CSC52_RS06035 () | 1090308..1090544 | - | 237 | WP_000617704.1 | hypothetical protein | - |
| CSC52_RS06040 () | 1090622..1091116 | - | 495 | WP_001253432.1 | hypothetical protein | - |
| CSC52_RS06045 () | 1091950..1092738 | - | 789 | WP_110184181.1 | DUF1828 domain-containing protein | - |
| CSC52_RS15590 () | 1092775..1093206 | - | 432 | Protein_1090 | hypothetical protein | - |
| CSC52_RS06050 () | 1094102..1095037 | + | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| CSC52_RS06055 () | 1095039..1096022 | + | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| CSC52_RS06060 () | 1096392..1097183 | - | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| CSC52_RS06065 () | 1097188..1097661 | - | 474 | WP_000550252.1 | hypothetical protein | - |
| CSC52_RS06070 () | 1097847..1098135 | + | 289 | Protein_1095 | BsaG protein | - |
| CSC52_RS06075 () | 1098608..1099189 | - | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| CSC52_RS06085 () | 1100153..1100860 | + | 708 | WP_001039427.1 | Serine protease SplA | VF |
| CSC52_RS06090 () | 1100985..1101707 | + | 723 | WP_001039454.1 | Serine protease SplB | VF |
| CSC52_RS06095 () | 1101765..1102484 | + | 720 | WP_001038872.1 | Serine protease SplC | VF |
| CSC52_RS06100 () | 1102605..1103324 | + | 720 | WP_001038704.1 | Serine protease SplD | VF |
| CSC52_RS06105 () | 1103273..1103380 | - | 108 | WP_011447030.1 | hypothetical protein | - |
| CSC52_RS06110 () | 1103482..1104201 | + | 720 | WP_001038752.1 | Serine protease SplF | VF |
| CSC52_RS06115 () | 1104264..1104398 | + | 135 | WP_001791797.1 | hypothetical protein | - |
| CSC52_RS06120 () | 1104562..1106118 | + | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| CSC52_RS06125 () | 1106111..1107340 | + | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| CSC52_RS06130 () | 1107792..1108286 | + | 495 | Protein_1106 | IS21 family transposase IS232 | Transposase |
| CSC52_RS06135 () | 1108277..1108438 | + | 162 | Protein_1107 | transposase | - |
| CSC52_RS06140 () | 1108416..1108517 | - | 102 | WP_001792025.1 | hypothetical protein | - |
| - () | 1108555..1108612 | + | 58 | - | - | Antitoxin Detail |
| CSC52_RS06145 () | 1108640..1108735 | - | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| CSC52_RS06150 () | 1108880..1109892 | + | 1013 | Protein_1110 | IS3 family transposase ISClsp1 | Transposase |
| CSC52_RS06155 () | 1110090..1110662 | - | 573 | WP_000414216.1 | hypothetical protein | - |
| CSC52_RS06160 () | 1110763..1111104 | - | 342 | WP_000627540.1 | DUF3969 family protein | - |
| CSC52_RS06165 () | 1111145..1111771 | - | 627 | WP_000669024.1 | hypothetical protein | - |
| CSC52_RS06170 () | 1111846..1112841 | - | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| CSC52_RS06175 () | 1112922..1113572 | - | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| CSC52_RS06180 () | 1113875..1114330 | + | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| CSC52_RS06185 () | 1114489..1115967 | + | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| CSC52_RS06190 () | 1115972..1116973 | + | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| CSC52_RS06195 () | 1116970..1117227 | - | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| CSC52_RS06200 () | 1117293..1117766 | + | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| CSC52_RS06205 () | 1117771..1118517 | + | 747 | WP_001822900.1 | S9 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.007 |