MGE detailed information
MGE type: Prophage MGE length: 35279 bp
Accession: NZ_CP029657 Location: 1935180..1970458 Organism: Staphylococcus aureus strain AR_0468 Replicon: chromosome
Accession: NZ_CP029657 Location: 1935180..1970458 Organism: Staphylococcus aureus strain AR_0468 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC53_RS09955 () | 1930993..1931739 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| CSC53_RS09960 () | 1931744..1932217 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| CSC53_RS09965 () | 1932283..1932540 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| CSC53_RS09970 () | 1932537..1933538 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| CSC53_RS09975 () | 1933543..1935021 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| CSC53_RS09980 () | 1935180..1935635 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| CSC53_RS09985 () | 1935938..1936588 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| CSC53_RS09990 () | 1936669..1937664 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| CSC53_RS09995 () | 1937739..1938365 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| CSC53_RS10000 () | 1938406..1938747 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| CSC53_RS10005 () | 1938848..1939420 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| CSC53_RS10010 () | 1939618..1940630 | - | 1013 | Protein_1851 | IS3 family transposase ISClsp1 | Transposase |
| CSC53_RS10015 () | 1940775..1940870 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1940898..1940955 | - | 58 | - | - | Antitoxin Detail |
| CSC53_RS10020 () | 1940993..1941094 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| CSC53_RS10025 () | 1941072..1941233 | - | 162 | Protein_1854 | transposase | - |
| CSC53_RS10030 () | 1941224..1941718 | - | 495 | Protein_1855 | IS21 family transposase IS232 | Transposase |
| CSC53_RS10035 () | 1942170..1943399 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| CSC53_RS10040 () | 1943392..1944948 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| CSC53_RS10045 () | 1945112..1945246 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| CSC53_RS10050 () | 1945309..1946028 | - | 720 | WP_001038752.1 | Serine protease SplF | VF |
| CSC53_RS10055 () | 1946130..1946237 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| CSC53_RS10060 () | 1946186..1946905 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| CSC53_RS10065 () | 1947026..1947745 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| CSC53_RS10070 () | 1947803..1948525 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| CSC53_RS10075 () | 1948650..1949357 | - | 708 | WP_001039427.1 | Serine protease SplA | VF |
| CSC53_RS10085 () | 1950321..1950902 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| CSC53_RS10090 () | 1951375..1951663 | - | 289 | Protein_1866 | BsaG protein | - |
| CSC53_RS10095 () | 1951849..1952322 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| CSC53_RS10100 () | 1952327..1953118 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| CSC53_RS10105 () | 1953488..1954471 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| CSC53_RS10110 () | 1954473..1955408 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| CSC53_RS15565 () | 1956304..1956735 | + | 432 | Protein_1871 | hypothetical protein | - |
| CSC53_RS10115 () | 1956772..1957560 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| CSC53_RS10120 () | 1958394..1958888 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| CSC53_RS10125 () | 1958966..1959202 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| CSC53_RS10130 () | 1959223..1959999 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| CSC53_RS10140 () | 1960551..1961327 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| CSC53_RS10145 () | 1961610..1962365 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| CSC53_RS15510 () | 1962404..1963175 | - | 772 | Protein_1878 | Enterotoxin type C-2 | VF |
| CSC53_RS10160 () | 1963329..1964057 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| CSC53_RS10165 () | 1964092..1964811 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| CSC53_RS10170 () | 1965092..1965874 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| CSC53_RS10215 () | 1967234..1967788 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| CSC53_RS10225 () | 1968111..1969511 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| CSC53_RS10230 () | 1969535..1970458 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| CSC53_RS10235 () | 1970516..1971553 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| CSC53_RS10240 () | 1971543..1971653 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| CSC53_RS10245 () | 1971816..1972319 | + | 504 | WP_000737975.1 | signal transduction protein TRAP | - |
| CSC53_RS10250 () | 1972443..1973666 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| CSC53_RS10255 () | 1973659..1974399 | - | 741 | WP_000216874.1 | ABC transporter ATP-binding protein | - |
| CSC53_RS10260 () | 1974533..1974955 | + | 423 | WP_000004981.1 | HIT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.002 |