MGE detailed information
MGE type: Prophage MGE length: 35282 bp
Accession: NZ_CP029474 Location: 2545012..2580293 Organism: Staphylococcus aureus strain USA 100 isolate 30-47 Replicon: chromosome
Accession: NZ_CP029474 Location: 2545012..2580293 Organism: Staphylococcus aureus strain USA 100 isolate 30-47 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKK89_RS12850 () | 2540825..2541571 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| DKK89_RS12855 () | 2541576..2542049 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| DKK89_RS12860 () | 2542115..2542372 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| DKK89_RS12865 () | 2542369..2543370 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| DKK89_RS12870 () | 2543375..2544853 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| DKK89_RS12875 () | 2545012..2545467 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| DKK89_RS12880 () | 2545771..2546421 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| DKK89_RS12885 () | 2546502..2547497 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| DKK89_RS12890 () | 2547572..2548198 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| DKK89_RS12895 () | 2548239..2548580 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| DKK89_RS12900 () | 2548681..2549253 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| DKK89_RS12905 () | 2549451..2550463 | - | 1013 | Protein_2413 | IS3 family transposase ISClsp1 | Transposase |
| DKK89_RS12910 () | 2550608..2550703 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 2550731..2550788 | - | 58 | - | - | Antitoxin Detail |
| DKK89_RS12915 () | 2550826..2550927 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| DKK89_RS12920 () | 2550905..2551066 | - | 162 | Protein_2416 | transposase | - |
| DKK89_RS12925 () | 2551057..2551551 | - | 495 | Protein_2417 | IS21 family transposase IS232 | Transposase |
| DKK89_RS12930 () | 2552003..2553232 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| DKK89_RS12935 () | 2553225..2554781 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| DKK89_RS12940 () | 2554945..2555079 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| DKK89_RS12945 () | 2555142..2555861 | - | 720 | WP_001038752.1 | Serine protease SplF | VF |
| DKK89_RS12950 () | 2555963..2556070 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| DKK89_RS12955 () | 2556019..2556738 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| DKK89_RS12960 () | 2556859..2557578 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| DKK89_RS12965 () | 2557636..2558358 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| DKK89_RS12970 () | 2558483..2559190 | - | 708 | WP_001571470.1 | Serine protease SplA | VF |
| DKK89_RS12980 () | 2560157..2560738 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| DKK89_RS12985 () | 2561211..2561499 | - | 289 | Protein_2428 | BsaG protein | - |
| DKK89_RS12990 () | 2561685..2562158 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| DKK89_RS12995 () | 2562163..2562954 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| DKK89_RS13000 () | 2563324..2564307 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| DKK89_RS13005 () | 2564309..2565244 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| DKK89_RS14435 () | 2566140..2566571 | + | 432 | Protein_2433 | hypothetical protein | - |
| DKK89_RS13010 () | 2566608..2567396 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| DKK89_RS13015 () | 2568230..2568724 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| DKK89_RS13020 () | 2568802..2569038 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| DKK89_RS13025 () | 2569059..2569835 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| DKK89_RS13035 () | 2570387..2571163 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| DKK89_RS13040 () | 2571446..2572201 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| DKK89_RS14395 () | 2572240..2573011 | - | 772 | Protein_2440 | Enterotoxin type C-2 | VF |
| DKK89_RS13055 () | 2573165..2573866 | - | 702 | WP_127161467.1 | Enterotoxin type A | VF |
| DKK89_RS13060 () | 2573927..2574646 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| DKK89_RS13065 () | 2574927..2575709 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| DKK89_RS13110 () | 2577069..2577623 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| DKK89_RS13120 () | 2577946..2579346 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| DKK89_RS13125 () | 2579370..2580293 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| DKK89_RS13130 () | 2580351..2581388 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| DKK89_RS13135 () | 2581378..2581488 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| DKK89_RS13140 () | 2581651..2582154 | + | 504 | WP_000737975.1 | signal transduction protein TRAP | - |
| DKK89_RS13145 () | 2582278..2583501 | - | 1224 | WP_000551836.1 | ABC transporter permease | - |
| DKK89_RS13150 () | 2583494..2584234 | - | 741 | WP_000216874.1 | ABC transporter ATP-binding protein | - |
| DKK89_RS13155 () | 2584368..2584790 | + | 423 | WP_000004981.1 | HIT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.002 |