MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89248 bp
Accession: NZ_CP029365 Location: 1..89248 Organism: Escherichia coli strain WCHEC035148 Replicon: plasmid p1_035148
Accession: NZ_CP029365 Location: 1..89248 Organism: Escherichia coli strain WCHEC035148 Replicon: plasmid p1_035148
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DI496_RS00010 () | 138..941 | + | 804 | WP_112031911.1 | hypothetical protein | - |
| DI496_RS00015 () | 1034..1492 | + | 459 | WP_000243176.1 | hypothetical protein | - |
| DI496_RS00020 () | 1646..2104 | - | 459 | WP_000020026.1 | hypothetical protein | - |
| DI496_RS00025 () | 2121..2312 | - | 192 | WP_001350911.1 | hypothetical protein | - |
| DI496_RS00030 () | 2672..4369 | + | 1698 | WP_089477104.1 | capsid protein | - |
| DI496_RS00035 () | 4516..4794 | + | 279 | WP_089477103.1 | Ig-like domain-containing protein | - |
| DI496_RS00040 () | 4862..6520 | + | 1659 | WP_112031912.1 | phage tail protein | - |
| DI496_RS00045 () | 6564..7298 | + | 735 | WP_000801019.1 | hypothetical protein | - |
| DI496_RS00050 () | 7366..7938 | + | 573 | WP_001112721.1 | hypothetical protein | - |
| DI496_RS00055 () | 7947..8438 | + | 492 | WP_032220995.1 | hypothetical protein | - |
| DI496_RS00060 () | 8491..9042 | + | 552 | WP_032220996.1 | hypothetical protein | - |
| DI496_RS00065 () | 9058..9765 | + | 708 | WP_000021878.1 | hypothetical protein | - |
| DI496_RS00070 () | 10147..10902 | - | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| DI496_RS00075 () | 11291..12112 | + | 822 | WP_001025045.1 | hypothetical protein | - |
| DI496_RS00080 () | 12260..15196 | + | 2937 | Protein_15 | transglycosylase | - |
| DI496_RS00085 () | 15599..16222 | + | 624 | Protein_16 | transglycosylase | - |
| DI496_RS00090 () | 16228..16602 | + | 375 | WP_032220997.1 | hypothetical protein | - |
| DI496_RS00095 () | 16599..18029 | + | 1431 | WP_112031913.1 | baseplate protein | - |
| DI496_RS00100 () | 18040..18885 | + | 846 | WP_032220999.1 | phage tail protein | - |
| DI496_RS26145 () | 18980..19426 | + | 447 | WP_032220795.1 | hypothetical protein | - |
| DI496_RS00110 () | 19429..22611 | + | 3183 | WP_112031914.1 | tail fiber protein | - |
| DI496_RS00115 () | 22611..23021 | + | 411 | WP_075851178.1 | tail fiber assembly protein | - |
| DI496_RS00120 () | 23144..23312 | - | 169 | Protein_23 | recombinase family protein | - |
| DI496_RS00125 () | 23416..23742 | + | 327 | WP_000457140.1 | holin | - |
| DI496_RS00130 () | 23742..24188 | + | 447 | WP_000526264.1 | hypothetical protein | - |
| DI496_RS00135 () | 24178..24798 | + | 621 | WP_069067330.1 | hypothetical protein | - |
| DI496_RS00140 () | 24791..26716 | + | 1926 | WP_000609495.1 | hypothetical protein | - |
| DI496_RS00145 () | 26716..27084 | + | 369 | WP_000156174.1 | hypothetical protein | - |
| DI496_RS00150 () | 27179..28564 | + | 1386 | WP_053919843.1 | ddrB | - |
| DI496_RS00160 () | 28629..30311 | + | 1683 | WP_180554568.1 | phage portal protein | - |
| DI496_RS00165 () | 30325..31323 | + | 999 | WP_032342280.1 | hypothetical protein | - |
| DI496_RS00170 () | 31524..32486 | + | 963 | WP_112031916.1 | lytic replication protein | - |
| DI496_RS00175 () | 32636..33805 | - | 1170 | WP_112031917.1 | transposase | - |
| DI496_RS00185 () | 34398..34622 | + | 225 | WP_000245715.1 | host cell division inhibitor Icd-like protein | - |
| DI496_RS00190 () | 34622..35329 | + | 708 | WP_180554567.1 | Rha family transcriptional regulator | - |
| DI496_RS26150 () | 35329..35526 | + | 198 | WP_052936017.1 | hypothetical protein | - |
| DI496_RS00195 () | 35559..36044 | - | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| DI496_RS00200 () | 36196..43035 | + | 6840 | WP_112031918.1 | DEAD/DEAH box helicase family protein | - |
| DI496_RS00205 () | 43072..43506 | + | 435 | WP_000209223.1 | hypothetical protein | - |
| DI496_RS00210 () | 43509..43769 | + | 261 | WP_001230915.1 | hypothetical protein | - |
| DI496_RS00215 () | 44104..44400 | + | 297 | WP_086252943.1 | VRR-NUC domain-containing protein | - |
| DI496_RS00220 () | 44415..44615 | + | 201 | WP_001238268.1 | hypothetical protein | - |
| DI496_RS00225 () | 44630..44911 | + | 282 | WP_001344839.1 | hypothetical protein | - |
| DI496_RS00230 () | 45025..46233 | + | 1209 | WP_000077919.1 | hypothetical protein | - |
| DI496_RS00255 () | 48611..49438 | + | 828 | WP_074470336.1 | serine protease | - |
| DI496_RS26155 () | 50122..50697 | + | 576 | WP_000928280.1 | hypothetical protein | - |
| DI496_RS26160 () | 50697..51089 | + | 393 | WP_023908618.1 | hypothetical protein | - |
| DI496_RS00275 () | 51198..51590 | + | 393 | WP_000435256.1 | hypothetical protein | - |
| DI496_RS00280 () | 51971..52951 | + | 981 | WP_031325887.1 | hypothetical protein | - |
| DI496_RS00285 () | 52951..54459 | + | 1509 | WP_000897063.1 | hypothetical protein | - |
| DI496_RS26165 () | 54487..55524 | - | 1038 | WP_023908617.1 | hypothetical protein | - |
| DI496_RS00295 () | 55919..56947 | + | 1029 | WP_001292231.1 | tyrosine-type recombinase/integrase | - |
| DI496_RS00300 () | 57057..57365 | + | 309 | WP_000349257.1 | hypothetical protein | - |
| DI496_RS00305 () | 57362..57838 | + | 477 | WP_000861173.1 | hypothetical protein | - |
| DI496_RS00310 () | 57835..58329 | + | 495 | WP_112031919.1 | dUTP diphosphatase | - |
| DI496_RS00315 () | 58344..59045 | + | 702 | WP_089477112.1 | DUF2829 domain-containing protein | - |
| DI496_RS00320 () | 59052..59816 | + | 765 | WP_112031920.1 | hypothetical protein | - |
| DI496_RS00325 () | 59806..60900 | + | 1095 | WP_112031921.1 | hypothetical protein | - |
| DI496_RS00330 () | 60936..61316 | - | 381 | WP_112031922.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DI496_RS00335 () | 61316..61537 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DI496_RS00340 () | 61610..61999 | - | 390 | WP_000506731.1 | hypothetical protein | - |
| DI496_RS00345 () | 62098..62349 | - | 252 | WP_112031923.1 | DNA polymerase III subunit theta | - |
| DI496_RS00355 () | 62664..63494 | - | 831 | WP_112031924.1 | DUF551 domain-containing protein | - |
| DI496_RS00360 () | 63505..63768 | - | 264 | WP_000224218.1 | hypothetical protein | - |
| DI496_RS00365 () | 63770..63961 | - | 192 | WP_021517457.1 | hypothetical protein | - |
| DI496_RS00370 () | 64134..64580 | - | 447 | WP_112031925.1 | ead/Ea22-like family protein | - |
| DI496_RS00375 () | 64577..65263 | - | 687 | WP_080028522.1 | ead/Ea22-like family protein | - |
| DI496_RS00380 () | 65250..65939 | - | 690 | WP_112031926.1 | hypothetical protein | - |
| DI496_RS00385 () | 65956..66951 | - | 996 | WP_044083693.1 | DUF968 domain-containing protein | - |
| DI496_RS00390 () | 67050..67742 | - | 693 | WP_112031927.1 | metallophosphoesterase | - |
| DI496_RS00395 () | 67739..68050 | - | 312 | WP_087758022.1 | hypothetical protein | - |
| DI496_RS00400 () | 68047..68271 | - | 225 | WP_048256676.1 | hypothetical protein | - |
| DI496_RS00405 () | 68268..68543 | - | 276 | WP_112031928.1 | DUF4752 family protein | - |
| DI496_RS00410 () | 68540..69235 | - | 696 | WP_112031929.1 | ead/Ea22-like family protein | - |
| DI496_RS00415 () | 69232..69555 | - | 324 | WP_069067282.1 | carboxylate--amine ligase | - |
| DI496_RS00420 () | 69555..70256 | - | 702 | WP_069067283.1 | ead/Ea22-like family protein | - |
| DI496_RS00425 () | 70246..70530 | - | 285 | WP_052936027.1 | DNA-binding protein | - |
| DI496_RS00430 () | 70560..71171 | - | 612 | WP_112031930.1 | DUF4406 domain-containing protein | - |
| DI496_RS25905 () | 71171..71326 | - | 156 | WP_157209371.1 | hypothetical protein | - |
| DI496_RS00435 () | 71443..72018 | + | 576 | WP_112031931.1 | recombinase | - |
| DI496_RS26170 () | 72350..72517 | + | 168 | WP_000218500.1 | hypothetical protein | - |
| DI496_RS00440 () | 72641..72820 | + | 180 | WP_071998905.1 | host cell division inhibitor Icd-like protein | - |
| DI496_RS00450 () | 72905..73132 | - | 228 | WP_001396850.1 | hypothetical protein | - |
| DI496_RS00455 () | 73318..73926 | - | 609 | WP_000776434.1 | hypothetical protein | - |
| DI496_RS00460 () | 74210..74863 | + | 654 | WP_001557715.1 | hypothetical protein | - |
| DI496_RS00465 () | 75192..75521 | + | 330 | WP_112031932.1 | baseplate protein | - |
| DI496_RS00470 () | 75514..76707 | + | 1194 | WP_074470350.1 | phage tail protein | - |
| DI496_RS00475 () | 76741..77469 | - | 729 | WP_109157909.1 | hypothetical protein | - |
| DI496_RS00485 () | 77748..78086 | - | 339 | WP_000806445.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DI496_RS00490 () | 78157..78459 | - | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DI496_RS00495 () | 78622..79413 | + | 792 | WP_112031933.1 | phage tail protein | - |
| DI496_RS00500 () | 79410..80177 | + | 768 | WP_000203293.1 | hypothetical protein | - |
| DI496_RS00505 () | 80181..81161 | + | 981 | WP_000046500.1 | hypothetical protein | - |
| DI496_RS00510 () | 81158..81811 | + | 654 | WP_087503501.1 | baseplate protein | - |
| DI496_RS00515 () | 81871..82776 | + | 906 | WP_112031934.1 | recombination-associated protein RdgC | - |
| DI496_RS00520 () | 82760..83440 | + | 681 | WP_000812238.1 | hypothetical protein | - |
| DI496_RS00525 () | 83433..84338 | + | 906 | WP_080028512.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| DI496_RS00530 () | 84387..86048 | - | 1662 | WP_032220989.1 | glutamine--tRNA ligase | - |
| DI496_RS00535 () | 86317..86604 | - | 288 | WP_000595051.1 | hypothetical protein | - |
| DI496_RS00540 () | 86597..87238 | - | 642 | WP_000585023.1 | AAA family ATPase | - |
| DI496_RS00545 () | 87527..87865 | - | 339 | WP_000076909.1 | plasmid stabilization protein | - |
| DI496_RS00550 () | 87879..88835 | - | 957 | WP_073714505.1 | recombinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|