MGE detailed information
MGE type: Prophage MGE length: 23043 bp
Accession: NZ_CP029239 Location: 1676357..1699399 Organism: Escherichia coli strain BH212 Replicon: chromosome
Accession: NZ_CP029239 Location: 1676357..1699399 Organism: Escherichia coli strain BH212 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DF195_RS08320 () | 1672872..1673618 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| DF195_RS08325 () | 1673707..1674393 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| DF195_RS08330 () | 1674570..1674773 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| DF195_RS08335 () | 1674808..1676268 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| DF195_RS08340 () | 1676357..1677724 | - | 1368 | Protein_1623 | MHS family MFS transporter | - |
| DF195_RS08345 () | 1678245..1678358 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| DF195_RS08350 () | 1678427..1678660 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| DF195_RS08355 () | 1678977..1679567 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| DF195_RS08360 () | 1679665..1680240 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| DF195_RS08365 () | 1680240..1681202 | - | 963 | WP_001027733.1 | phage tail protein | - |
| DF195_RS08370 () | 1681153..1681722 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| DF195_RS08375 () | 1682111..1682344 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| DF195_RS08380 () | 1682402..1682812 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| DF195_RS08385 () | 1682964..1683137 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| DF195_RS08390 () | 1683309..1683464 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| DF195_RS08395 () | 1683543..1683608 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| DF195_RS08400 () | 1683611..1683799 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| DF195_RS08405 () | 1683810..1684022 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| DF195_RS08410 () | 1684385..1684882 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| DF195_RS08415 () | 1684879..1685412 | - | 534 | WP_001092971.1 | lysozyme | - |
| DF195_RS08420 () | 1685409..1685720 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| DF195_RS08425 () | 1685725..1685940 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| DF195_RS23200 () | 1686160..1686330 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| DF195_RS08430 () | 1686694..1686909 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| DF195_RS08435 () | 1687210..1687422 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| DF195_RS08440 () | 1687477..1687566 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| DF195_RS08445 () | 1687844..1688596 | - | 753 | WP_001047135.1 | antitermination protein | - |
| DF195_RS08450 () | 1688610..1689659 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| DF195_RS08455 () | 1689661..1689939 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| DF195_RS08460 () | 1690006..1690257 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| DF195_RS08465 () | 1690474..1690629 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| DF195_RS08470 () | 1690701..1690988 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| DF195_RS08475 () | 1690988..1691227 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| DF195_RS08480 () | 1691252..1691557 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| DF195_RS08485 () | 1691760..1692092 | + | 333 | WP_001301033.1 | protein FlxA | - |
| DF195_RS08490 () | 1692529..1692678 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| DF195_RS08495 () | 1692713..1692991 | - | 279 | Protein_1655 | hypothetical protein | - |
| DF195_RS08500 () | 1692975..1693205 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| DF195_RS08505 () | 1693289..1693696 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| DF195_RS08510 () | 1693863..1694018 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| DF195_RS08515 () | 1694178..1694396 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| DF195_RS08525 () | 1694964..1695152 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| DF195_RS08530 () | 1695149..1695340 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| DF195_RS08535 () | 1695433..1696200 | + | 768 | Protein_1662 | exonuclease | - |
| DF195_RS08540 () | 1696301..1697529 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| DF195_RS08545 () | 1697542..1698228 | + | 687 | Protein_1664 | IS3 family transposase IS2 | Transposase |
| DF195_RS08550 () | 1698242..1699399 | + | 1158 | Protein_1665 | Putative defective protein IntQ ; Integrase | Integrase |
| DF195_RS08560 () | 1699587..1700606 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| DF195_RS08565 () | 1700618..1701832 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| DF195_RS08570 () | 1702038..1702364 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| DF195_RS08575 () | 1702499..1702840 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| DF195_RS08580 () | 1702875..1703435 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| DF195_RS08585 () | 1703438..1704148 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |