MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60942 bp
Accession: NZ_CP029184 Location: 1..60942 Organism: Escherichia coli strain H9Ecoli Replicon: plasmid pMCR-H9
Accession: NZ_CP029184 Location: 1..60942 Organism: Escherichia coli strain H9Ecoli Replicon: plasmid pMCR-H9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEF50_RS26065 () | 1..1029 | + | 1029 | WP_001175215.1 | replication initiation protein | - |
| DEF50_RS26085 () | 2628..2789 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| DEF50_RS26090 () | 2939..3535 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| DEF50_RS26870 () | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| DEF50_RS26100 () | 3911..4576 | - | 666 | WP_000532149.1 | P-loop NTPase | - |
| DEF50_RS26110 () | 5165..5494 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| DEF50_RS26115 () | 5895..6410 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| DEF50_RS26120 () | 6514..7056 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| DEF50_RS26125 () | 7053..7307 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| DEF50_RS26130 () | 7304..7546 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| DEF50_RS26140 () | 8117..8410 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| DEF50_RS26145 () | 8899..9147 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| DEF50_RS26150 () | 9144..9491 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| DEF50_RS26155 () | 9579..9761 | - | 183 | WP_001428470.1 | hypothetical protein | - |
| DEF50_RS26160 () | 10263..10562 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| DEF50_RS26165 () | 10822..11148 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| DEF50_RS26170 () | 11150..11590 | - | 441 | WP_023223352.1 | hypothetical protein | - |
| DEF50_RS26175 () | 11610..12317 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| DEF50_RS26180 () | 12319..13071 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| DEF50_RS26185 () | 13089..13490 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| DEF50_RS26190 () | 13858..14199 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| DEF50_RS26195 () | 14196..18491 | + | 4296 | WP_108991006.1 | relaxase | - |
| DEF50_RS26200 () | 18712..20337 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| DEF50_RS26205 () | 20409..21182 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| DEF50_RS26700 () | 21141..21581 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| DEF50_RS26215 () | 21927..22133 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| DEF50_RS26220 () | 22202..24367 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| DEF50_RS26225 () | 24372..24947 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| DEF50_RS26230 () | 25117..26793 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| DEF50_RS26235 () | 26888..27403 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| DEF50_RS26240 () | 27450..28103 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| DEF50_RS26245 () | 28115..29239 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| DEF50_RS26275 () | 30955..32241 | - | 1287 | WP_104730792.1 | hypothetical protein | VF |
| DEF50_RS26280 () | 32254..32889 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| DEF50_RS26285 () | 32893..33375 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| DEF50_RS26290 () | 33441..34004 | - | 564 | WP_034169414.1 | hypothetical protein | - |
| DEF50_RS26295 () | 34054..35163 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DEF50_RS26300 () | 35154..36692 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| DEF50_RS26305 () | 36717..37211 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| DEF50_RS26310 () | 37195..38517 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| DEF50_RS26315 () | 38556..40199 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| DEF50_RS26320 () | 40192..40728 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| DEF50_RS26325 () | 40775..42733 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DEF50_RS26330 () | 42749..43804 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| DEF50_RS26335 () | 43823..44962 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| DEF50_RS26340 () | 44952..45653 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| DEF50_RS26345 () | 45719..46453 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| DEF50_RS26355 () | 46619..48976 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| DEF50_RS26360 () | 48982..49302 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| DEF50_RS26365 () | 49373..49561 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| DEF50_RS26370 () | 49663..50247 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| DEF50_RS26375 () | 50268..50666 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| DEF50_RS26380 () | 50785..51222 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| DEF50_RS26385 () | 51228..52463 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| DEF50_RS26390 () | 52466..52765 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| DEF50_RS26395 () | 52813..53622 | + | 810 | WP_024237698.1 | hypothetical protein | - |
| DEF50_RS26400 () | 53845..54069 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| DEF50_RS26405 () | 54078..54722 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| DEF50_RS26410 () | 54728..55723 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| DEF50_RS26415 () | 55727..55984 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| DEF50_RS26420 () | 55981..56283 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| DEF50_RS26425 () | 56264..56521 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| DEF50_RS26430 () | 56554..57000 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| DEF50_RS26880 () | 57011..57181 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| DEF50_RS26435 () | 57185..57628 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| DEF50_RS26445 () | 58002..58955 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| DEF50_RS26885 () | 58982..59158 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| DEF50_RS26450 () | 59151..59366 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| DEF50_RS26455 () | 59359..59865 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|