MGE detailed information
MGE type: Mobilizable plasmid MGE length: 145524 bp
Accession: NZ_CP029181 Location: 1..145524 Organism: Escherichia coli strain H9Ecoli Replicon: plasmid p1-H9
Accession: NZ_CP029181 Location: 1..145524 Organism: Escherichia coli strain H9Ecoli Replicon: plasmid p1-H9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEF50_RS25010 () | 1..882 | + | 882 | WP_032206658.1 | RepB family plasmid replication initiator protein | - |
| DEF50_RS25015 () | 2238..2600 | - | 363 | WP_072213850.1 | hypothetical protein | - |
| DEF50_RS25020 () | 2601..3752 | - | 1152 | WP_108990993.1 | IS30 family transposase IS30D | Transposase |
| DEF50_RS25025 () | 3820..4077 | - | 258 | Protein_3 | IS3 family transposase ISEc52 | Transposase |
| DEF50_RS25030 () | 4146..4700 | - | 555 | Protein_4 | recombination-associated protein RdgC | - |
| DEF50_RS25035 () | 4693..4977 | - | 285 | WP_001567974.1 | hypothetical protein | - |
| DEF50_RS25050 () | 5439..6227 | + | 789 | WP_000890209.1 | hypothetical protein | - |
| DEF50_RS25055 () | 6267..6689 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| DEF50_RS25060 () | 6865..7257 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| DEF50_RS25065 () | 7593..8477 | + | 885 | WP_072649745.1 | RepB family plasmid replication initiator protein | - |
| DEF50_RS25070 () | 8770..9579 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| DEF50_RS25075 () | 9748..10944 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| DEF50_RS25080 () | 10961..11962 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| DEF50_RS25085 () | 12188..13894 | + | 1707 | WP_000067707.1 | hypothetical protein | - |
| DEF50_RS25090 () | 13954..15543 | + | 1590 | WP_038997104.1 | hypothetical protein | - |
| DEF50_RS25095 () | 15553..16368 | + | 816 | WP_001514461.1 | hypothetical protein | - |
| DEF50_RS25100 () | 16404..16985 | + | 582 | WP_032203564.1 | hypothetical protein | - |
| DEF50_RS25105 () | 16997..17506 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| DEF50_RS25110 () | 17666..18778 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| DEF50_RS25115 () | 18972..19127 | - | 156 | WP_032203563.1 | type I toxin-antitoxin system Hok family toxin | - |
| DEF50_RS25120 () | 19525..20743 | + | 1219 | Protein_20 | IS3 family transposase | - |
| DEF50_RS25125 () | 20764..21780 | + | 1017 | Protein_21 | IS256 family transposase IS1414 | Transposase |
| DEF50_RS25130 () | 21828..24002 | - | 2175 | WP_032176963.1 | Catabolite control protein A | VF |
| DEF50_RS25135 () | 24336..25160 | + | 825 | WP_032203560.1 | carbon-phosphorus lyase | - |
| DEF50_RS25140 () | 25173..26408 | + | 1236 | WP_032177316.1 | MFS transporter | - |
| DEF50_RS25145 () | 26441..27154 | + | 714 | WP_032177315.1 | Protein SapB | VF |
| DEF50_RS26670 () | 27499..27726 | - | 228 | Protein_26 | VENN motif pre-toxin domain-containing protein | - |
| DEF50_RS25155 () | 27845..28310 | - | 466 | Protein_27 | IS3 family transposase | - |
| DEF50_RS25160 () | 28391..29899 | - | 1509 | WP_032203558.1 | group II intron reverse transcriptase/maturase | - |
| DEF50_RS25170 () | 30572..30994 | - | 423 | Protein_29 | IS3 family transposase IS911 | Transposase |
| DEF50_RS25175 () | 30995..31880 | + | 886 | Protein_30 | IS3 family transposase | - |
| DEF50_RS25180 () | 32222..32919 | + | 698 | Protein_31 | IS1 family transposase | - |
| DEF50_RS25190 () | 33201..33923 | - | 723 | WP_097500726.1 | hypothetical protein | - |
| DEF50_RS25195 () | 33920..34405 | - | 486 | WP_000071636.1 | hypothetical protein | - |
| DEF50_RS25200 () | 35163..35961 | + | 799 | Protein_34 | trhR | - |
| DEF50_RS25205 () | 35964..36475 | + | 512 | Protein_35 | hypothetical protein | - |
| DEF50_RS25210 () | 37090..38136 | + | 1047 | WP_108990995.1 | thioredoxin family protein | - |
| DEF50_RS25215 () | 38126..38419 | + | 294 | Protein_37 | conjugal transfer protein TraH | - |
| DEF50_RS25220 () | 38421..39065 | - | 645 | Protein_38 | IS3 family transposase ISEc52 | Transposase |
| DEF50_RS25225 () | 39131..40282 | + | 1152 | WP_108990996.1 | IS30 family transposase IS30D | Transposase |
| DEF50_RS25230 () | 40292..41197 | + | 906 | Protein_40 | IS3 family transposase ISEc31 | Transposase |
| DEF50_RS25235 () | 41208..42336 | + | 1129 | Protein_41 | IS3 family transposase ISKpn38 | Transposase |
| DEF50_RS25240 () | 42398..42643 | + | 246 | Protein_42 | IS91 family transposase ISEc37 | Transposase |
| DEF50_RS25245 () | 43228..46743 | + | 3516 | WP_089571546.1 | Outer membrane protein IcsA autotransporter | VF |
| DEF50_RS25250 () | 46918..47123 | - | 206 | Protein_44 | hypothetical protein | - |
| DEF50_RS25255 () | 47113..47313 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| DEF50_RS25260 () | 47603..47890 | - | 288 | WP_032206513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DEF50_RS25265 () | 47887..48138 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DEF50_RS25275 () | 48721..49884 | + | 1164 | Protein_48 | helicase | - |
| DEF50_RS25280 () | 50074..51090 | - | 1017 | Protein_49 | Methyl-accepting chemotaxis protein McpQ | VF |
| DEF50_RS25290 () | 51134..51838 | - | 705 | WP_032236663.1 | IS6 family transposase IS15DI | Transposase |
| DEF50_RS25295 () | 52158..53333 | + | 1176 | WP_063865358.1 | Efflux pump periplasmic linker BepF | VF |
| DEF50_RS25300 () | 53357..56509 | + | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| DEF50_RS25305 () | 56579..57058 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| DEF50_RS25310 () | 57150..57854 | - | 705 | WP_032236663.1 | IS6 family transposase IS15DI | Transposase |
| DEF50_RS25315 () | 57920..58405 | - | 486 | Protein_55 | dihydropteroate synthase | - |
| DEF50_RS25320 () | 58399..58746 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| DEF50_RS25325 () | 58910..59701 | - | 792 | WP_001206317.1 | Streptomycin 3''-adenylyltransferase | ARG |
| DEF50_RS25330 () | 59794..60267 | - | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| DEF50_RS25335 () | 60424..61437 | + | 1014 | WP_108990997.1 | IS91 family transposase ISAzo26 | Transposase |
| DEF50_RS26680 () | 61640..61990 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| DEF50_RS25345 () | 62067..62711 | + | 645 | Protein_61 | STAS domain-containing protein | - |
| DEF50_RS25350 () | 62903..63600 | + | 698 | Protein_62 | IS1 family transposase | - |
| DEF50_RS25355 () | 63602..64144 | + | 543 | Protein_63 | PAS domain-containing protein | - |
| DEF50_RS25360 () | 64186..64890 | + | 705 | WP_032236663.1 | IS6 family transposase IS15DI | Transposase |
| DEF50_RS25365 () | 65225..65617 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| DEF50_RS25370 () | 65937..66323 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| DEF50_RS25380 () | 66517..67221 | - | 705 | WP_032236663.1 | IS6 family transposase IS15DI | Transposase |
| DEF50_RS25385 () | 67289..68587 | + | 1299 | Protein_68 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DEF50_RS26685 () | 68621..68707 | - | 87 | Protein_69 | transcriptional regulator MerD | - |
| DEF50_RS25390 () | 68725..70419 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| DEF50_RS25395 () | 70471..70893 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| DEF50_RS25400 () | 70929..71204 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| DEF50_RS25405 () | 71218..71568 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| DEF50_RS25410 () | 71640..72074 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| DEF50_RS25425 () | 72861..73103 | + | 243 | WP_000844627.1 | transposase | - |
| DEF50_RS25430 () | 73135..73785 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DEF50_RS25435 () | 73891..75090 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| DEF50_RS25440 () | 75122..76005 | - | 884 | Protein_78 | EamA family transporter | - |
| DEF50_RS25445 () | 76143..76550 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| DEF50_RS25450 () | 76539..78290 | + | 1752 | Protein_80 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| DEF50_RS25455 () | 78308..78844 | + | 537 | Protein_81 | helicase | - |
| DEF50_RS25460 () | 78909..80071 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| DEF50_RS25465 () | 80103..82394 | + | 2292 | Protein_83 | helicase | - |
| DEF50_RS25470 () | 82428..82868 | + | 441 | WP_023352064.1 | hypothetical protein | - |
| DEF50_RS25475 () | 82865..83113 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| DEF50_RS25480 () | 83150..84277 | - | 1128 | WP_000526244.1 | RelA/SpoT domain-containing protein | - |
| DEF50_RS25485 () | 84380..85021 | - | 642 | WP_023351534.1 | hypothetical protein | - |
| DEF50_RS25490 () | 85211..85771 | - | 561 | WP_000848374.1 | Ref family protein | - |
| DEF50_RS25495 () | 86019..86330 | - | 312 | WP_001224235.1 | hypothetical protein | - |
| DEF50_RS25500 () | 86381..87412 | - | 1032 | WP_000067536.1 | site-specific integrase | - |
| DEF50_RS25505 () | 87420..87641 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| DEF50_RS25520 () | 88278..89258 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| DEF50_RS25525 () | 89716..90246 | - | 531 | WP_001327048.1 | 4Fe-4S binding protein | - |
| DEF50_RS25530 () | 90243..90839 | - | 597 | WP_032203482.1 | molecular chaperone | - |
| DEF50_RS25535 () | 90894..91670 | - | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| DEF50_RS25540 () | 91663..92289 | - | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| DEF50_RS25545 () | 92303..94729 | - | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| DEF50_RS25550 () | 95221..95805 | + | 585 | Protein_98 | two-component system sensor histidine kinase DcuS | - |
| DEF50_RS25555 () | 95898..96878 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| DEF50_RS25565 () | 97066..97275 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| DEF50_RS25570 () | 97386..98237 | + | 852 | WP_000611664.1 | hypothetical protein | - |
| DEF50_RS25575 () | 98270..99385 | - | 1116 | WP_032203728.1 | phage antirepressor KilAC domain-containing protein | - |
| DEF50_RS25580 () | 99382..99966 | - | 585 | Protein_103 | host cell division inhibitor Icd-like protein | - |
| DEF50_RS25585 () | 99963..101447 | - | 1485 | WP_000124164.1 | terminase | - |
| DEF50_RS25590 () | 101447..102626 | - | 1180 | Protein_105 | terminase | - |
| DEF50_RS25595 () | 102713..103165 | - | 453 | WP_001312282.1 | late promoter-activating protein (Gp10) | - |
| DEF50_RS25600 () | 103230..103927 | + | 698 | Protein_107 | IS1 family transposase IS1X2 | Transposase |
| DEF50_RS25610 () | 103944..104861 | - | 918 | Protein_108 | DUF968 domain-containing protein | - |
| DEF50_RS25615 () | 104889..105068 | - | 180 | WP_038997082.1 | hypothetical protein | - |
| DEF50_RS25620 () | 105073..105453 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DEF50_RS25625 () | 105453..105674 | - | 222 | WP_059039668.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DEF50_RS25630 () | 105857..107413 | + | 1557 | WP_038997084.1 | type I restriction-modification system subunit M | - |
| DEF50_RS25635 () | 107410..108636 | + | 1227 | Protein_113 | restriction endonuclease subunit S | - |
| DEF50_RS25640 () | 108758..111874 | + | 3117 | WP_072663081.1 | HsdR family type I site-specific deoxyribonuclease | - |
| DEF50_RS25645 () | 112139..112645 | - | 507 | WP_059039674.1 | hypothetical protein | - |
| DEF50_RS25650 () | 112718..113980 | - | 1263 | WP_108990998.1 | hypothetical protein | - |
| DEF50_RS25670 () | 114524..115221 | + | 698 | Protein_117 | IS1 family transposase | - |
| DEF50_RS25675 () | 115239..115427 | + | 189 | Protein_118 | IS30 family transposase | - |
| DEF50_RS25680 () | 115437..116342 | + | 906 | Protein_119 | IS3 family transposase ISCfr6 | Transposase |
| DEF50_RS25685 () | 116465..117130 | + | 666 | Protein_120 | IS66 family transposase ISCro1 | Transposase |
| DEF50_RS25695 () | 117302..118036 | - | 735 | WP_064766422.1 | helix-turn-helix domain-containing protein | - |
| DEF50_RS25700 () | 118126..118434 | + | 309 | WP_059039577.1 | PerC family transcriptional regulator | - |
| DEF50_RS25705 () | 118593..118931 | + | 339 | WP_025263478.1 | c-type lysozyme inhibitor | - |
| DEF50_RS26690 () | 119489..119629 | - | 141 | WP_152930419.1 | hypothetical protein | - |
| DEF50_RS25715 () | 119712..120822 | + | 1111 | WP_104773017.1 | IS3 family transposase IS1351 | Transposase |
| DEF50_RS25720 () | 120874..120987 | + | 114 | WP_104773018.1 | TetR family transcriptional regulator | - |
| DEF50_RS25725 () | 121318..122546 | + | 1229 | WP_199917265.1 | IS3 family transposase IS2 | Transposase |
| DEF50_RS25735 () | 123021..126494 | - | 3474 | WP_075700159.1 | cellulose biosynthesis protein BcsC | - |
| DEF50_RS25745 () | 126961..127347 | - | 387 | Protein_129 | IS200-IS605 family transposase IS200C | Transposase |
| DEF50_RS25755 () | 127533..128879 | - | 1347 | WP_108991000.1 | group II intron reverse transcriptase/maturase | - |
| DEF50_RS25765 () | 129623..131773 | - | 2151 | WP_032236686.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| DEF50_RS25770 () | 131837..133942 | - | 2106 | WP_072663031.1 | UDP-forming cellulose synthase catalytic subunit | - |
| DEF50_RS25785 () | 134716..135413 | + | 698 | Protein_133 | IS1 family transposase | - |
| DEF50_RS25790 () | 135460..136806 | - | 1347 | WP_159086739.1 | GGDEF domain-containing protein | - |
| DEF50_RS25795 () | 136796..139129 | - | 2334 | WP_108991002.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| DEF50_RS25800 () | 139639..140012 | + | 374 | Protein_136 | IS1 family transposase | - |
| DEF50_RS25805 () | 140026..140634 | + | 609 | Protein_137 | IS21 family transposase IS100kyp | Transposase |
| DEF50_RS25810 () | 140631..141412 | + | 782 | Protein_138 | IS21 family transposase IS100kyp | Transposase |
| DEF50_RS26865 () | 141504..141626 | - | 123 | Protein_139 | IS66 family insertion sequence element accessory protein TnpB | - |
| DEF50_RS25820 () | 141690..142394 | + | 705 | WP_032236663.1 | IS6 family transposase IS15DI | Transposase |
| DEF50_RS25830 () | 142738..145120 | - | 2383 | Protein_141 | DUF4165 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|