MGE detailed information
MGE type: Prophage MGE length: 58339 bp
Accession: NZ_CP029166 Location: 1593686..1652024 Organism: Staphylococcus aureus strain SVH7513 Replicon: chromosome
Accession: NZ_CP029166 Location: 1593686..1652024 Organism: Staphylococcus aureus strain SVH7513 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD555_RS08005 () | 1589058..1589306 | + | 249 | WP_001151997.1 | ferredoxin | - |
| DD555_RS08010 () | 1589412..1589957 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| DD555_RS08015 () | 1590236..1590355 | - | 120 | WP_001789947.1 | hypothetical protein | - |
| DD555_RS08020 () | 1590554..1591468 | - | 915 | WP_000913219.1 | DUF1672 domain-containing protein | - |
| DD555_RS08025 () | 1591483..1591689 | - | 207 | WP_001033757.1 | hypothetical protein | - |
| DD555_RS08030 () | 1591682..1592620 | - | 939 | WP_000472936.1 | DUF1672 domain-containing protein | - |
| DD555_RS08035 () | 1592678..1593595 | - | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| DD555_RS08040 () | 1593686..1593901 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| DD555_RS08055 () | 1594623..1596077 | - | 1455 | WP_084927456.1 | N-acetylmuramoyl-L-alanine amidase | - |
| DD555_RS08060 () | 1596088..1596390 | - | 303 | WP_000339141.1 | phage holin | - |
| DD555_RS08065 () | 1596526..1596825 | - | 300 | WP_000466775.1 | DUF2951 family protein | - |
| DD555_RS08070 () | 1596871..1597035 | - | 165 | WP_000916021.1 | XkdX family protein | - |
| DD555_RS08075 () | 1597028..1597417 | - | 390 | WP_001166598.1 | DUF2977 domain-containing protein | - |
| DD555_RS08080 () | 1597417..1598883 | - | 1467 | WP_084986301.1 | BppU family phage baseplate upper protein | - |
| DD555_RS08085 () | 1598883..1600793 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| DD555_RS08090 () | 1600809..1601099 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| DD555_RS08095 () | 1601099..1602682 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| DD555_RS08100 () | 1602691..1603515 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| DD555_RS08105 () | 1603515..1609715 | - | 6201 | WP_065211490.1 | phage tail tape measure protein | - |
| DD555_RS08110 () | 1609729..1609887 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| DD555_RS08115 () | 1609938..1610279 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| DD555_RS08120 () | 1610337..1610792 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| DD555_RS08125 () | 1610884..1611525 | - | 642 | WP_000807536.1 | tail protein | - |
| DD555_RS08130 () | 1611560..1611955 | - | 396 | WP_031775786.1 | DUF3168 domain-containing protein | - |
| DD555_RS08135 () | 1611956..1612357 | - | 402 | WP_031776127.1 | hypothetical protein | - |
| DD555_RS08140 () | 1612354..1612686 | - | 333 | WP_000395495.1 | hypothetical protein | - |
| DD555_RS08145 () | 1612698..1612976 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| DD555_RS08150 () | 1613045..1614208 | - | 1164 | WP_031776039.1 | phage major capsid protein | - |
| DD555_RS08155 () | 1614220..1614993 | - | 774 | WP_021187674.1 | Clp protease ClpP | - |
| DD555_RS08160 () | 1614977..1616215 | - | 1239 | WP_020444675.1 | phage portal protein | - |
| DD555_RS08165 () | 1616220..1617911 | - | 1692 | WP_084927464.1 | terminase large subunit | - |
| DD555_RS08170 () | 1617901..1618206 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| DD555_RS08175 () | 1618336..1618650 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| DD555_RS08180 () | 1618807..1619244 | - | 438 | WP_000513699.1 | transcriptional regulator | - |
| DD555_RS08185 () | 1619257..1620624 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| DD555_RS08190 () | 1620605..1620895 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| DD555_RS08195 () | 1621029..1621133 | + | 105 | WP_076050621.1 | hypothetical protein | - |
| DD555_RS15680 () | 1621236..1623683 | - | 2448 | WP_084986341.1 | virulence-associated E family protein | - |
| DD555_RS08210 () | 1623735..1623935 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| DD555_RS08215 () | 1624003..1624155 | - | 153 | WP_179133244.1 | transcriptional activator RinB | - |
| DD555_RS08220 () | 1624158..1624358 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| DD555_RS08225 () | 1624333..1624521 | - | 189 | WP_000195789.1 | DUF1381 domain-containing protein | - |
| DD555_RS08230 () | 1624538..1624711 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| DD555_RS08235 () | 1624748..1625275 | - | 528 | WP_000181816.1 | dUTP pyrophosphatase | - |
| DD555_RS08240 () | 1625268..1625515 | - | 248 | Protein_1530 | DUF1024 family protein | - |
| DD555_RS08245 () | 1625508..1625816 | - | 309 | WP_000144711.1 | hypothetical protein | - |
| DD555_RS08250 () | 1625813..1626160 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| DD555_RS08255 () | 1626157..1626558 | - | 402 | WP_000695757.1 | hypothetical protein | - |
| DD555_RS08260 () | 1626561..1626767 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| DD555_RS08265 () | 1626782..1627030 | - | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| DD555_RS08270 () | 1627039..1627239 | - | 201 | WP_000235381.1 | hypothetical protein | - |
| DD555_RS08275 () | 1627242..1627499 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| DD555_RS08280 () | 1627499..1627900 | - | 402 | WP_000113981.1 | PVL family protein | - |
| DD555_RS08285 () | 1627900..1628085 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| DD555_RS08290 () | 1628098..1630050 | - | 1953 | WP_084927697.1 | DNA polymerase | - |
| DD555_RS08295 () | 1630119..1630676 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| DD555_RS08300 () | 1630702..1631868 | - | 1167 | WP_084986307.1 | DUF2800 domain-containing protein | - |
| DD555_RS08305 () | 1631865..1632227 | - | 363 | WP_084986306.1 | hypothetical protein | - |
| DD555_RS08310 () | 1632242..1632565 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| DD555_RS08315 () | 1632644..1632805 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| DD555_RS08320 () | 1632818..1633081 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| DD555_RS08325 () | 1633106..1633321 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| DD555_RS08330 () | 1633376..1633741 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| DD555_RS08335 () | 1633710..1633955 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| DD555_RS08340 () | 1634011..1634220 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| DD555_RS08345 () | 1634210..1634353 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| DD555_RS08350 () | 1634382..1635158 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| DD555_RS08355 () | 1635172..1635408 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS08360 () | 1635560..1635874 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | - |
| DD555_RS08365 () | 1635887..1636348 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| DD555_RS08370 () | 1636366..1636950 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| DD555_RS08375 () | 1637180..1637326 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| DD555_RS08380 () | 1637323..1637937 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| DD555_RS08385 () | 1638063..1639268 | + | 1206 | WP_020444721.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| DD555_RS08390 () | 1639311..1641338 | - | 2028 | WP_084927664.1 | hypothetical protein | - |
| DD555_RS08395 () | 1641331..1642260 | - | 930 | WP_001548912.1 | DUF1672 domain-containing protein | - |
| DD555_RS08400 () | 1642505..1644256 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| DD555_RS08405 () | 1644237..1644962 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| DD555_RS08410 () | 1645095..1645832 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| DD555_RS08415 () | 1645825..1646367 | - | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| DD555_RS08420 () | 1646360..1647091 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| DD555_RS08425 () | 1647183..1647689 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| DD555_RS08430 () | 1647767..1648654 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DD555_RS08435 () | 1648703..1649152 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| DD555_RS08440 () | 1649257..1649799 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| DD555_RS08445 () | 1649881..1650789 | + | 909 | WP_084927662.1 | aldo/keto reductase | - |
| DD555_RS08450 () | 1651005..1651253 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| DD555_RS08455 () | 1651269..1652024 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| DD555_RS08460 () | 1652166..1652981 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| DD555_RS08465 () | 1653086..1654006 | - | 921 | WP_000454064.1 | ribonuclease Z | - |
| DD555_RS08470 () | 1654319..1655803 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| DD555_RS08475 () | 1656033..1656899 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|