MGE detailed information
MGE type: Prophage MGE length: 31732 bp
Accession: NZ_CP029086 Location: 404820..436551 Organism: Staphylococcus aureus strain AR462 Replicon: chromosome
Accession: NZ_CP029086 Location: 404820..436551 Organism: Staphylococcus aureus strain AR462 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC48_RS02010 () | 400633..401379 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| CSC48_RS02015 () | 401384..401857 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| CSC48_RS02020 () | 401923..402180 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| CSC48_RS02025 () | 402177..403178 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| CSC48_RS02030 () | 403183..404661 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| CSC48_RS02035 () | 404820..405275 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| CSC48_RS02040 () | 405578..406228 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| CSC48_RS02045 () | 406309..407304 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| CSC48_RS02050 () | 407379..408005 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| CSC48_RS02055 () | 408046..408387 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| CSC48_RS02060 () | 408488..409060 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| CSC48_RS02065 () | 409258..410270 | - | 1013 | Protein_366 | IS3 family transposase ISClsp1 | Transposase |
| CSC48_RS02070 () | 410415..410510 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 410538..410595 | - | 58 | - | - | Antitoxin Detail |
| CSC48_RS02075 () | 410633..410734 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| CSC48_RS02080 () | 410712..410873 | - | 162 | Protein_369 | transposase | - |
| CSC48_RS02085 () | 410864..411358 | - | 495 | Protein_370 | IS21 family transposase IS232 | Transposase |
| CSC48_RS02090 () | 411810..413039 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| CSC48_RS02095 () | 413032..414588 | - | 1557 | WP_031862851.1 | type I restriction-modification system subunit M | - |
| CSC48_RS02100 () | 414752..414886 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| CSC48_RS02105 () | 414949..415668 | - | 720 | WP_031906773.1 | Serine protease SplD | VF |
| CSC48_RS02110 () | 415789..416508 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| CSC48_RS02115 () | 416566..417288 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| CSC48_RS02120 () | 417413..418120 | - | 708 | WP_001039427.1 | Serine protease SplA | VF |
| CSC48_RS02130 () | 419084..419665 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| CSC48_RS02135 () | 420138..420426 | - | 289 | Protein_379 | BsaG protein | - |
| CSC48_RS02140 () | 420612..421085 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| CSC48_RS02145 () | 421090..421881 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| CSC48_RS02150 () | 422251..423234 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| CSC48_RS02155 () | 423236..424171 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| CSC48_RS14380 () | 425067..425498 | + | 432 | Protein_384 | hypothetical protein | - |
| CSC48_RS02160 () | 425535..426323 | + | 789 | WP_000206344.1 | DUF1828 domain-containing protein | - |
| CSC48_RS02165 () | 427157..427651 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| CSC48_RS02170 () | 427729..427965 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| CSC48_RS02175 () | 427986..428762 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| CSC48_RS02185 () | 429314..430090 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| CSC48_RS02190 () | 430373..431128 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| CSC48_RS14330 () | 431167..431938 | - | 772 | Protein_391 | Enterotoxin type C-2 | VF |
| CSC48_RS02205 () | 432092..432820 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| CSC48_RS02210 () | 432855..433574 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| CSC48_RS02215 () | 433855..434637 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| CSC48_RS02260 () | 435997..436551 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| CSC48_RS02270 () | 436874..438274 | - | 1401 | WP_108720527.1 | protoporphyrinogen oxidase | - |
| CSC48_RS02275 () | 438298..439221 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| CSC48_RS02280 () | 439279..440316 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| CSC48_RS02285 () | 440306..440416 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| CSC48_RS02290 () | 440579..441082 | + | 504 | WP_031862852.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0.001 |