MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 112075 bp
Accession: NZ_CP028959 Location: 5179005..5291079 Organism: Pseudomonas aeruginosa strain IMP66 Replicon: chromosome
Accession: NZ_CP028959 Location: 5179005..5291079 Organism: Pseudomonas aeruginosa strain IMP66 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBX28_RS24665 () | 5174523..5178776 | + | 4254 | WP_034020464.1 | two-partner secretion system exoprotein TpsA4 | - |
| DBX28_RS24670 () | 5179142..5180002 | + | 861 | WP_003158180.1 | ParA family protein | - |
| DBX28_RS24675 () | 5180004..5180729 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| DBX28_RS24680 () | 5180726..5181223 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| DBX28_RS24685 () | 5181229..5182122 | + | 894 | WP_017002285.1 | Lar family restriction alleviation protein | - |
| DBX28_RS24690 () | 5182122..5182823 | + | 702 | WP_017002284.1 | DUF2786 domain-containing protein | - |
| DBX28_RS24695 () | 5182820..5183527 | + | 708 | WP_003122069.1 | HNH endonuclease | - |
| DBX28_RS24700 () | 5183511..5183729 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| DBX28_RS24705 () | 5183726..5185069 | + | 1344 | WP_017002283.1 | replicative DNA helicase | - |
| DBX28_RS31000 () | 5185508..5185954 | - | 447 | WP_017002282.1 | hypothetical protein | - |
| DBX28_RS24715 () | 5186399..5186680 | - | 282 | WP_017002281.1 | hypothetical protein | - |
| DBX28_RS24720 () | 5186858..5187043 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| DBX28_RS24725 () | 5187033..5187560 | + | 528 | WP_017002280.1 | hypothetical protein | - |
| DBX28_RS24730 () | 5187557..5187814 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| DBX28_RS24735 () | 5187807..5188304 | + | 498 | WP_147719731.1 | hypothetical protein | - |
| DBX28_RS24740 () | 5188297..5188530 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| DBX28_RS24745 () | 5188530..5189546 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| DBX28_RS24750 () | 5189549..5189797 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| DBX28_RS24755 () | 5189794..5191527 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| DBX28_RS24760 () | 5191555..5192310 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| DBX28_RS24765 () | 5192313..5193638 | + | 1326 | WP_079263474.1 | hypothetical protein | - |
| DBX28_RS24775 () | 5194380..5194577 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| DBX28_RS24780 () | 5194733..5195461 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| DBX28_RS24785 () | 5195467..5196015 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| DBX28_RS24790 () | 5196062..5196901 | + | 840 | WP_025997473.1 | Rha family transcriptional regulator | - |
| DBX28_RS24795 () | 5196931..5197419 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| DBX28_RS24800 () | 5197527..5197772 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| DBX28_RS24805 () | 5197838..5198056 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| DBX28_RS24815 () | 5198256..5198516 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| DBX28_RS24820 () | 5198538..5198948 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DBX28_RS24825 () | 5198948..5199178 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| DBX28_RS24830 () | 5199434..5201353 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| DBX28_RS24835 () | 5201661..5201870 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| DBX28_RS24840 () | 5202091..5203980 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| DBX28_RS24845 () | 5203977..5205953 | + | 1977 | WP_017002277.1 | DEAD/DEAH box helicase | - |
| DBX28_RS24850 () | 5206094..5206438 | + | 345 | WP_003448665.1 | hypothetical protein | - |
| DBX28_RS24855 () | 5206509..5206799 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| DBX28_RS24860 () | 5206796..5207095 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DBX28_RS24865 () | 5207297..5208418 | + | 1122 | WP_017002276.1 | hypothetical protein | VF |
| DBX28_RS24870 () | 5208418..5210127 | + | 1710 | WP_020751093.1 | Outer membrane lipoprotein BfpB | VF |
| DBX28_RS24875 () | 5210131..5211456 | + | 1326 | WP_017002275.1 | type 4b pilus protein PilO2 | - |
| DBX28_RS24880 () | 5211446..5211979 | + | 534 | WP_017002274.1 | type IV pilus biogenesis protein PilP | - |
| DBX28_RS24885 () | 5211988..5213568 | + | 1581 | WP_003149523.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| DBX28_RS24890 () | 5213568..5214647 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DBX28_RS24895 () | 5214669..5215199 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| DBX28_RS24900 () | 5215196..5216137 | + | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| DBX28_RS24905 () | 5216142..5217470 | + | 1329 | WP_003109362.1 | hypothetical protein | VF |
| DBX28_RS24910 () | 5217499..5217936 | + | 438 | WP_017002272.1 | hypothetical protein | VF |
| DBX28_RS24920 () | 5218858..5219247 | + | 390 | WP_016264238.1 | hypothetical protein | - |
| DBX28_RS31005 () | 5219320..5219496 | + | 177 | WP_003149538.1 | hypothetical protein | - |
| DBX28_RS24925 () | 5219958..5220437 | + | 480 | WP_017002271.1 | DUF3577 domain-containing protein | - |
| DBX28_RS31010 () | 5220576..5220734 | + | 159 | WP_017002270.1 | hypothetical protein | - |
| DBX28_RS24930 () | 5220808..5221005 | + | 198 | WP_009315817.1 | hypothetical protein | - |
| DBX28_RS24940 () | 5221491..5222198 | + | 708 | WP_017002269.1 | hypothetical protein | - |
| DBX28_RS24945 () | 5222434..5222784 | + | 351 | WP_017002268.1 | hypothetical protein | - |
| DBX28_RS24950 () | 5222841..5223473 | + | 633 | WP_015503590.1 | DUF3275 family protein | - |
| DBX28_RS24955 () | 5223470..5223751 | + | 282 | WP_017002267.1 | hypothetical protein | - |
| DBX28_RS24960 () | 5223821..5224183 | + | 363 | WP_017002266.1 | hypothetical protein | - |
| DBX28_RS24965 () | 5224251..5224505 | + | 255 | WP_017002265.1 | hypothetical protein | - |
| DBX28_RS24970 () | 5224598..5225203 | + | 606 | WP_017002264.1 | hypothetical protein | - |
| DBX28_RS24975 () | 5225233..5226678 | + | 1446 | WP_017002263.1 | class I SAM-dependent methyltransferase | - |
| DBX28_RS24980 () | 5226783..5229032 | + | 2250 | WP_017002262.1 | DEAD/DEAH box helicase | - |
| DBX28_RS24985 () | 5229134..5229568 | - | 435 | WP_169433239.1 | hypothetical protein | - |
| DBX28_RS24990 () | 5229716..5230990 | - | 1275 | WP_017002260.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DBX28_RS24995 () | 5230977..5231408 | - | 432 | WP_004347940.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DBX28_RS25000 () | 5231513..5232196 | + | 684 | WP_017002259.1 | SOS response-associated peptidase family protein | - |
| DBX28_RS25010 () | 5232905..5234067 | + | 1163 | WP_096243049.1 | IS3 family transposase IS222 | Transposase |
| DBX28_RS25015 () | 5234280..5234975 | + | 696 | WP_025997412.1 | hypothetical protein | - |
| DBX28_RS25020 () | 5234986..5235741 | + | 756 | WP_017001402.1 | TIGR03759 family integrating conjugative element protein | - |
| DBX28_RS25025 () | 5235726..5236307 | + | 582 | WP_003121011.1 | hypothetical protein | VF |
| DBX28_RS25030 () | 5236304..5236804 | + | 501 | WP_017001403.1 | integrating conjugative element protein | - |
| DBX28_RS25035 () | 5236813..5237082 | + | 270 | WP_009316303.1 | hypothetical protein | - |
| DBX28_RS25040 () | 5237086..5239317 | + | 2232 | WP_017001404.1 | type IV conjugative transfer system coupling protein TraD | - |
| DBX28_RS25045 () | 5239317..5240063 | + | 747 | WP_017001405.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| DBX28_RS25050 () | 5240074..5241555 | + | 1482 | WP_017001406.1 | UvrD-helicase domain-containing protein | - |
| DBX28_RS25055 () | 5241663..5241968 | + | 306 | WP_017001407.1 | hypothetical protein | - |
| DBX28_RS25060 () | 5242062..5242400 | + | 339 | WP_017001408.1 | RAQPRD family integrative conjugative element protein | - |
| DBX28_RS25065 () | 5242397..5242636 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| DBX28_RS25070 () | 5242654..5243010 | + | 357 | WP_017001409.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| DBX28_RS25075 () | 5243021..5243407 | + | 387 | WP_017001410.1 | TIGR03750 family conjugal transfer protein | - |
| DBX28_RS25080 () | 5243404..5244063 | + | 660 | WP_017001411.1 | TIGR03746 family integrating conjugative element protein | - |
| DBX28_RS25085 () | 5244060..5244944 | + | 885 | WP_017001412.1 | TIGR03749 family integrating conjugative element protein | - |
| DBX28_RS25090 () | 5244928..5246433 | + | 1506 | WP_025324752.1 | TIGR03752 family integrating conjugative element protein | - |
| DBX28_RS25095 () | 5246411..5246854 | + | 444 | WP_017001414.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| DBX28_RS25100 () | 5246854..5249802 | + | 2949 | WP_025997414.1 | conjugative transfer ATPase | - |
| DBX28_RS25105 () | 5249799..5250083 | + | 285 | WP_017001416.1 | hypothetical protein | - |
| DBX28_RS31015 () | 5250080..5250565 | + | 486 | Protein_4835 | DsbA family protein | - |
| DBX28_RS31020 () | 5251009..5251308 | + | 300 | Protein_4836 | phosphoribulokinase | - |
| DBX28_RS25115 () | 5251475..5251744 | + | 270 | Protein_4837 | DDE-type integrase/transposase/recombinase | - |
| DBX28_RS25120 () | 5251978..5253022 | + | 1045 | Protein_4838 | IS110 family transposase ISEc21 | Transposase |
| DBX28_RS25125 () | 5253035..5253219 | + | 185 | Protein_4839 | IS3 family transposase | - |
| DBX28_RS25130 () | 5253559..5254749 | - | 1191 | WP_079263448.1 | EAL domain-containing protein | - |
| DBX28_RS25135 () | 5254970..5255566 | + | 597 | WP_017001420.1 | recombinase family protein | - |
| DBX28_RS25140 () | 5255641..5256192 | + | 552 | WP_017001421.1 | hypothetical protein | VF |
| DBX28_RS25145 () | 5256234..5256746 | + | 513 | WP_017001422.1 | hypothetical protein | VF |
| DBX28_RS25150 () | 5256746..5257294 | + | 549 | WP_017001423.1 | spore coat U domain-containing protein | - |
| DBX28_RS25155 () | 5257313..5258110 | + | 798 | WP_017001424.1 | hypothetical protein | VF |
| DBX28_RS25160 () | 5258113..5260494 | + | 2382 | WP_147719732.1 | F1 capsule-anchoring protein | VF |
| DBX28_RS25165 () | 5260491..5261438 | + | 948 | WP_147719733.1 | spore coat U domain-containing protein | - |
| DBX28_RS25170 () | 5261592..5261924 | + | 333 | Protein_4848 | transposase | - |
| DBX28_RS25175 () | 5261984..5262836 | + | 853 | WP_086008295.1 | IS5 family transposase ISPst8 | Transposase |
| DBX28_RS25180 () | 5262996..5264342 | + | 1347 | WP_079263478.1 | ISNCY family transposase ISLad2 | Transposase |
| DBX28_RS25185 () | 5264353..5264706 | - | 354 | WP_079263477.1 | hypothetical protein | - |
| DBX28_RS25190 () | 5264951..5265154 | + | 204 | Protein_4852 | trans-aconitate methyltransferase | - |
| DBX28_RS25195 () | 5265292..5265723 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| DBX28_RS25200 () | 5265723..5266661 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| DBX28_RS25205 () | 5266679..5268061 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| DBX28_RS25210 () | 5268061..5268408 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| DBX28_RS25215 () | 5268405..5269955 | + | 1551 | WP_017002326.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DBX28_RS25220 () | 5270127..5270363 | - | 237 | Protein_4858 | hypothetical protein | - |
| DBX28_RS25225 () | 5270486..5270758 | + | 273 | WP_025997478.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DBX28_RS25230 () | 5270762..5271112 | + | 351 | WP_017002323.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DBX28_RS25235 () | 5271490..5280003 | - | 8514 | WP_034070288.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| DBX28_RS25240 () | 5280568..5280831 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| DBX28_RS25245 () | 5280845..5281069 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| DBX28_RS25250 () | 5281284..5282003 | + | 720 | WP_009875850.1 | Crp/Fnr family transcriptional regulator | - |
| DBX28_RS25255 () | 5282074..5282436 | + | 363 | WP_017002336.1 | hypothetical protein | - |
| DBX28_RS25260 () | 5282540..5283034 | + | 495 | WP_017002335.1 | hypothetical protein | - |
| DBX28_RS25265 () | 5283143..5285161 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| DBX28_RS25270 () | 5285317..5286510 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| DBX28_RS31025 () | 5286898..5287254 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| DBX28_RS31030 () | 5287315..5287467 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| DBX28_RS25275 () | 5287466..5289385 | + | 1920 | WP_017002333.1 | helicase/relaxase domain-containing protein | - |
| DBX28_RS25280 () | 5289382..5290665 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DBX28_RS25300 () | 5291517..5294081 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| DBX28_RS25305 () | 5294237..5294965 | - | 729 | WP_003123393.1 | peptidoglycan editing factor PgeF | - |
| DBX28_RS25310 () | 5294962..5295924 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|