MGE detailed information
MGE type: Genomic_island MGE length: 49552 bp
Accession: NZ_CP028769 Location: 4136680..4186231 Organism: Escherichia coli strain A5 Replicon: chromosome
Accession: NZ_CP028769 Location: 4136680..4186231 Organism: Escherichia coli strain A5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY56_RS19880 (4131999) | 4131999..4132901 | - | 903 | WP_089613406.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| AOY56_RS19885 (4132921) | 4132921..4133424 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| AOY56_RS19890 (4133437) | 4133437..4133967 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| AOY56_RS19895 (4133977) | 4133977..4136613 | - | 2637 | WP_000120944.1 | fimbrial usher FimD | - |
| AOY56_RS19900 (4136680) | 4136680..4137405 | - | 726 | WP_000066573.1 | Chaperone protein FimC | VF |
| AOY56_RS19905 (4137442) | 4137442..4137981 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| AOY56_RS19910 (4138046) | 4138046..4138594 | - | 549 | WP_000695543.1 | Fimbrial subunit type 1 | VF |
| AOY56_RS19915 (4139074) | 4139074..4139670 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| AOY56_RS19920 (4140148) | 4140148..4140750 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| AOY56_RS19925 (4142205) | 4142205..4142921 | + | 717 | WP_021534608.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| AOY56_RS19930 (4142941) | 4142941..4144047 | + | 1107 | WP_047663168.1 | N-acetylneuraminate epimerase | - |
| AOY56_RS19935 (4144112) | 4144112..4145092 | + | 981 | WP_000379695.1 | sialate O-acetylesterase | - |
| AOY56_RS19940 (4145100) | 4145100..4145204 | - | 105 | Protein_3917 | HNH endonuclease | - |
| AOY56_RS19945 (4145304) | 4145304..4146176 | + | 873 | WP_000168592.1 | HNH endonuclease | - |
| AOY56_RS19950 (4146346) | 4146346..4148421 | + | 2076 | WP_000177023.1 | AAA family ATPase | - |
| AOY56_RS19955 (4148414) | 4148414..4149757 | + | 1344 | WP_000504877.1 | McrC family protein | - |
| AOY56_RS19960 (4149754) | 4149754..4150140 | + | 387 | WP_000148644.1 | hypothetical protein | - |
| AOY56_RS19965 (4150191) | 4150191..4152338 | + | 2148 | WP_001040176.1 | N-6 DNA methylase | - |
| AOY56_RS19970 (4152338) | 4152338..4153810 | + | 1473 | WP_087599174.1 | restriction endonuclease subunit S | - |
| AOY56_RS19975 (4153813) | 4153813..4155114 | + | 1302 | WP_000450024.1 | hypothetical protein | - |
| AOY56_RS19980 (4155111) | 4155111..4159397 | + | 4287 | WP_000007267.1 | hypothetical protein | - |
| AOY56_RS19985 (4159408) | 4159408..4160256 | + | 849 | WP_000092642.1 | hypothetical protein | - |
| AOY56_RS19990 (4160259) | 4160259..4161416 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| AOY56_RS19995 (4161406) | 4161406..4163091 | + | 1686 | WP_000323665.1 | ATP-binding protein | - |
| AOY56_RS20000 (4163099) | 4163099..4163641 | + | 543 | WP_001115385.1 | hypothetical protein | - |
| AOY56_RS20005 (4163638) | 4163638..4165107 | + | 1470 | WP_001022619.1 | Serine/threonine-protein kinase PrkC | VF |
| AOY56_RS20010 (4165308) | 4165308..4166573 | - | 1266 | WP_001218329.1 | Prophage integrase IntA ; Integrase | Integrase |
| AOY56_RS20015 (4166966) | 4166966..4167913 | - | 948 | WP_032251793.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| AOY56_RS20020 (4167906) | 4167906..4168301 | - | 396 | WP_000152739.1 | DUF6088 family protein | Antitoxin Detail |
| AOY56_RS20025 (4168371) | 4168371..4169204 | - | 834 | WP_086629378.1 | DUF4942 domain-containing protein | - |
| AOY56_RS20030 (4169319) | 4169319..4169660 | - | 342 | WP_086629380.1 | TA system toxin CbtA family protein | Toxin Detail |
| AOY56_RS20035 (4169691) | 4169691..4170026 | - | 336 | WP_086629383.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AOY56_RS20040 (4170026) | 4170026..4170499 | - | 474 | WP_086629385.1 | DNA repair protein RadC | - |
| AOY56_RS20045 (4170529) | 4170529..4171347 | - | 819 | WP_001296926.1 | DUF932 domain-containing protein | - |
| AOY56_RS20050 (4171584) | 4171584..4172537 | - | 954 | WP_087599172.1 | hypothetical protein | - |
| AOY56_RS20055 (4173130) | 4173130..4173744 | + | 615 | WP_087599171.1 | inovirus Gp2 family protein | - |
| AOY56_RS20060 (4173862) | 4173862..4174080 | + | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| AOY56_RS20065 (4174295) | 4174295..4175080 | - | 786 | WP_000766854.1 | hypothetical protein | - |
| AOY56_RS20070 (4175092) | 4175092..4176105 | - | 1014 | WP_000342611.1 | 50S ribosome-binding GTPase | - |
| AOY56_RS20075 (4176144) | 4176144..4176827 | - | 684 | WP_064759377.1 | WYL domain-containing protein | - |
| AOY56_RS20080 (4177403) | 4177403..4180816 | + | 3414 | WP_087599170.1 | DEAD/DEAH box helicase family protein | - |
| AOY56_RS20085 (4180880) | 4180880..4182514 | + | 1635 | WP_087599169.1 | class I SAM-dependent DNA methyltransferase | - |
| AOY56_RS20090 (4182511) | 4182511..4183704 | + | 1194 | WP_240751730.1 | restriction endonuclease subunit S | - |
| AOY56_RS20095 (4183713) | 4183713..4185335 | + | 1623 | WP_087599168.1 | AAA family ATPase | - |
| AOY56_RS20100 (4185335) | 4185335..4186231 | + | 897 | WP_000499116.1 | hypothetical protein | - |
| AOY56_RS20105 (4186454) | 4186454..4187722 | - | 1269 | WP_087599167.1 | integrase arm-type DNA-binding domain-containing protein | - |
| AOY56_RS20115 (4188202) | 4188202..4189221 | + | 1020 | WP_024184515.1 | NADPH-dependent aldehyde reductase Ahr | - |
| AOY56_RS20120 (4189351) | 4189351..4190853 | + | 1503 | WP_001442243.1 | DUF853 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|