MGE detailed information
MGE type: Genomic_island MGE length: 10669 bp
Accession: NZ_CP028756 Location: 4566677..4577345 Organism: Escherichia coli strain A19 Replicon: chromosome
Accession: NZ_CP028756 Location: 4566677..4577345 Organism: Escherichia coli strain A19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY72_RS22135 (4561885) | 4561885..4562340 | + | 456 | WP_000581504.1 | IrmA family protein | - |
| AOY72_RS22140 (4562419) | 4562419..4562652 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| AOY72_RS22145 (4562752) | 4562752..4563570 | + | 819 | WP_137584764.1 | DUF932 domain-containing protein | - |
| AOY72_RS22150 (4563625) | 4563625..4564110 | + | 486 | WP_201479231.1 | antirestriction protein | - |
| AOY72_RS22155 (4564125) | 4564125..4564601 | + | 477 | WP_073461968.1 | RadC family protein | - |
| AOY72_RS22160 (4564670) | 4564670..4564891 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| AOY72_RS22165 (4565054) | 4565054..4565422 | + | 369 | WP_001383228.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| AOY72_RS22170 (4565512) | 4565512..4565886 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | - |
| AOY72_RS22175 (4565937) | 4565937..4566371 | + | 435 | WP_001556361.1 | DUF5983 family protein | - |
| AOY72_RS22180 (4566383) | 4566383..4566580 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| AOY72_RS22185 (4566677) | 4566677..4567246 | + | 570 | WP_001290247.1 | DUF4942 domain-containing protein | - |
| AOY72_RS22190 (4567995) | 4567995..4569533 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AOY72_RS22195 (4569898) | 4569898..4571232 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AOY72_RS22200 (4571312) | 4571312..4573459 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| AOY72_RS22205 (4573518) | 4573518..4574975 | + | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| AOY72_RS22210 (4575212) | 4575212..4576729 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| AOY72_RS22215 (4576848) | 4576848..4577021 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| AOY72_RS22220 (4577049) | 4577049..4577345 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| AOY72_RS22225 (4577572) | 4577572..4577844 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| AOY72_RS22230 (4577856) | 4577856..4578086 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| AOY72_RS22235 (4578267) | 4578267..4579898 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| AOY72_RS22240 (4579895) | 4579895..4580614 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.01 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.01 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.01 |