MGE detailed information
MGE type: Genomic_island MGE length: 8869 bp
Accession: NZ_CP028746 Location: 4223687..4232555 Organism: Escherichia coli strain A29 Replicon: chromosome
Accession: NZ_CP028746 Location: 4223687..4232555 Organism: Escherichia coli strain A29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY82_RS20390 (4219783) | 4219783..4220121 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| AOY82_RS20395 (4220097) | 4220097..4221794 | + | 1698 | WP_000068974.1 | protein-disulfide reductase DsbD | - |
| AOY82_RS20400 (4221831) | 4221831..4222406 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| AOY82_RS20410 (4223205) | 4223205..4224742 | + | 1538 | Protein_4005 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AOY82_RS20415 (4225108) | 4225108..4226442 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AOY82_RS20420 (4226522) | 4226522..4228669 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| AOY82_RS20425 (4228728) | 4228728..4230185 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| AOY82_RS20430 (4230422) | 4230422..4231939 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| AOY82_RS20435 (4232058) | 4232058..4232231 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| AOY82_RS20440 (4232259) | 4232259..4232555 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| AOY82_RS20445 (4232782) | 4232782..4233054 | - | 273 | WP_086812958.1 | GNAT family N-acetyltransferase | - |
| AOY82_RS20450 (4233066) | 4233066..4233296 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| AOY82_RS20455 (4233477) | 4233477..4235108 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| AOY82_RS20460 (4235105) | 4235105..4235824 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |