MGE detailed information
MGE type: Prophage MGE length: 21707 bp
Accession: NZ_CP028702 Location: 2064330..2086036 Organism: Escherichia coli strain J53 Replicon: chromosome
Accession: NZ_CP028702 Location: 2064330..2086036 Organism: Escherichia coli strain J53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBB46_RS10770 () | 2060845..2061591 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| DBB46_RS10775 () | 2061680..2062366 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| DBB46_RS10780 () | 2062543..2062746 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| DBB46_RS10785 () | 2062781..2064241 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| DBB46_RS10790 () | 2064330..2065697 | - | 1368 | Protein_1967 | MHS family MFS transporter | - |
| DBB46_RS24420 () | 2066218..2066331 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| DBB46_RS10795 () | 2066400..2066633 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| DBB46_RS10800 () | 2066950..2067540 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| DBB46_RS10805 () | 2067638..2068213 | - | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| DBB46_RS10810 () | 2068213..2069175 | - | 963 | WP_001027733.1 | phage tail protein | - |
| DBB46_RS10815 () | 2069126..2069695 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| DBB46_RS10825 () | 2070084..2070317 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| DBB46_RS10830 () | 2070375..2070785 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| DBB46_RS10835 () | 2070937..2071110 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| DBB46_RS10840 () | 2071282..2071437 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| DBB46_RS24425 () | 2071516..2071581 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| DBB46_RS10845 () | 2071584..2071772 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| DBB46_RS10850 () | 2071783..2071995 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| DBB46_RS10855 () | 2072358..2072855 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| DBB46_RS10860 () | 2072852..2073385 | - | 534 | WP_001092971.1 | lysozyme | - |
| DBB46_RS10865 () | 2073382..2073693 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| DBB46_RS10870 () | 2073698..2073913 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| DBB46_RS24685 () | 2074133..2074303 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| DBB46_RS10875 () | 2074667..2074882 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| DBB46_RS10880 () | 2075183..2075395 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| DBB46_RS24430 () | 2075450..2075539 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| DBB46_RS10885 () | 2075817..2076569 | - | 753 | WP_001047135.1 | antitermination protein | - |
| DBB46_RS10890 () | 2076583..2077632 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| DBB46_RS10895 () | 2077634..2077912 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| DBB46_RS10900 () | 2077979..2078230 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| DBB46_RS10905 () | 2078447..2078602 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| DBB46_RS10910 () | 2078674..2078961 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| DBB46_RS10915 () | 2078961..2079200 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| DBB46_RS10920 () | 2079225..2079530 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| DBB46_RS10925 () | 2079733..2080065 | + | 333 | WP_001301033.1 | protein FlxA | - |
| DBB46_RS24435 () | 2080502..2080651 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| DBB46_RS10935 () | 2080686..2080964 | - | 279 | Protein_1999 | hypothetical protein | - |
| DBB46_RS10940 () | 2080948..2081178 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| DBB46_RS10945 () | 2081262..2081669 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| DBB46_RS10950 () | 2081836..2081991 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| DBB46_RS10960 () | 2082151..2082369 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| DBB46_RS10970 () | 2082937..2083125 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| DBB46_RS10975 () | 2083122..2083313 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| DBB46_RS10980 () | 2083406..2084173 | + | 768 | Protein_2006 | exonuclease | - |
| DBB46_RS10985 () | 2084170..2084865 | + | 696 | Protein_2007 | IS3 family transposase IS2 | Transposase |
| DBB46_RS10990 () | 2084879..2086036 | + | 1158 | Protein_2008 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DBB46_RS11000 () | 2086224..2087243 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| DBB46_RS11005 () | 2087255..2088469 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| DBB46_RS11015 () | 2088675..2089001 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| DBB46_RS11020 () | 2089136..2089477 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| DBB46_RS11025 () | 2089512..2090072 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| DBB46_RS11030 () | 2090075..2090785 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |