MGE detailed information
MGE type: Prophage MGE length: 115613 bp
Accession: NZ_CP028674 Location: 2449609..2565221 Organism: Escherichia coli strain 115 Replicon: chromosome
Accession: NZ_CP028674 Location: 2449609..2565221 Organism: Escherichia coli strain 115 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E44_RS12340 () | 2445509..2446729 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E44_RS12345 () | 2446854..2447549 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E44_RS12350 () | 2447502..2448794 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E44_RS12355 () | 2448952..2449566 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E44_RS12360 () | 2449609..2450463 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E44_RS12365 () | 2450465..2451082 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E44_RS12370 () | 2451093..2453516 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E44_RS12375 () | 2453577..2456003 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E44_RS12380 () | 2456202..2456507 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E44_RS12385 () | 2456615..2457325 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E44_RS12390 () | 2457328..2457888 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E44_RS12395 () | 2457923..2458264 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E44_RS12400 () | 2458399..2458725 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E44_RS12410 () | 2459495..2459679 | - | 185 | Protein_2379 | DUF3596 domain-containing protein | - |
| C9E44_RS12415 () | 2459714..2459965 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E44_RS12420 () | 2460038..2462509 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E44_RS12425 () | 2462602..2462793 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E44_RS12430 () | 2462790..2462978 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E44_RS12440 () | 2463547..2463765 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E44_RS12445 () | 2463837..2464136 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E44_RS12450 () | 2464489..2464767 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E44_RS12455 () | 2464769..2464960 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E44_RS12460 () | 2464981..2465352 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E44_RS12465 () | 2465450..2465752 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E44_RS12470 () | 2465749..2466174 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E44_RS12475 () | 2466197..2467159 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E44_RS12480 () | 2467166..2467906 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E44_RS12485 () | 2467932..2468701 | + | 770 | Protein_2393 | DUF1627 domain-containing protein | - |
| C9E44_RS12490 () | 2468717..2469112 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E44_RS12495 () | 2469169..2469753 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E44_RS12500 () | 2469869..2469973 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E44_RS12505 () | 2470219..2470374 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E44_RS12510 () | 2470542..2470820 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E44_RS12515 () | 2470822..2471871 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E44_RS12520 () | 2471884..2472243 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E44_RS12525 () | 2472240..2472929 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E44_RS12550 () | 2473566..2473994 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E44_RS12555 () | 2473991..2474246 | + | 256 | Protein_2403 | DUF3927 family protein | - |
| C9E44_RS12560 () | 2474473..2476323 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E44_RS12565 () | 2476763..2476978 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E44_RS12570 () | 2476983..2477327 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E44_RS12575 () | 2477378..2477911 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E44_RS12580 () | 2478181..2478750 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E44_RS12585 () | 2478750..2478896 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E44_RS12595 () | 2479124..2479309 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E44_RS12600 () | 2479734..2479961 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E44_RS12605 () | 2480003..2480368 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E44_RS12615 () | 2480658..2481221 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E44_RS12620 () | 2481218..2482879 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E44_RS12625 () | 2482943..2484880 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E44_RS12630 () | 2484925..2485146 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E44_RS12635 () | 2485092..2487593 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| C9E44_RS12640 () | 2487673..2487999 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C9E44_RS12645 () | 2488009..2488359 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E44_RS12650 () | 2488356..2488802 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E44_RS12655 () | 2488799..2489143 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E44_RS12660 () | 2489202..2489918 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E44_RS12665 () | 2489924..2490298 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E44_RS12670 () | 2490394..2490603 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E44_RS12675 () | 2490656..2493898 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E44_RS12680 () | 2493891..2494232 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E44_RS12685 () | 2494232..2494930 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E44_RS12690 () | 2494941..2495684 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E44_RS12695 () | 2495630..2496262 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E44_RS12700 () | 2496605..2497780 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E44_RS12705 () | 2497732..2500077 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E44_RS12710 () | 2500145..2500744 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| C9E44_RS12715 () | 2500896..2502209 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E44_RS12720 () | 2502211..2502480 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E44_RS12725 () | 2502593..2503167 | + | 575 | Protein_2435 | hypothetical protein | VF |
| C9E44_RS12730 () | 2503507..2504832 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E44_RS12740 () | 2505493..2506407 | - | 915 | Protein_2437 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E44_RS12745 () | 2506421..2506531 | + | 111 | Protein_2438 | type III effector | - |
| C9E44_RS12750 () | 2506578..2507212 | - | 635 | Protein_2439 | IS256 family transposase ISEic2 | Transposase |
| C9E44_RS12755 () | 2507497..2509035 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E44_RS12760 () | 2509085..2509432 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E44_RS12765 () | 2509429..2509809 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E44_RS12770 () | 2510149..2510427 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E44_RS12775 () | 2510855..2511001 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E44_RS12780 () | 2511138..2511785 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E44_RS12785 () | 2511969..2512559 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E44_RS12790 () | 2512778..2513834 | - | 1057 | Protein_2447 | IS630 family transposase | - |
| C9E44_RS12795 () | 2514066..2514716 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E44_RS12800 () | 2514875..2515110 | + | 236 | Protein_2449 | IS3 family transposase | - |
| C9E44_RS12810 () | 2515845..2515970 | + | 126 | Protein_2450 | outer membrane protein OmpW | - |
| C9E44_RS12815 () | 2516016..2517146 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E44_RS12820 () | 2517124..2517372 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E44_RS12825 () | 2517437..2519881 | - | 2445 | WP_000102181.1 | exonuclease | - |
| C9E44_RS12830 () | 2519974..2520162 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E44_RS12835 () | 2520159..2520347 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E44_RS12845 () | 2520912..2521121 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E44_RS12850 () | 2521122..2521760 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E44_RS12855 () | 2521772..2521924 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E44_RS12860 () | 2522217..2522555 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E44_RS12865 () | 2522947..2523189 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E44_RS12870 () | 2523173..2523598 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E44_RS12875 () | 2523667..2524710 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E44_RS12880 () | 2524703..2525164 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E44_RS12885 () | 2525198..2525914 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E44_RS12890 () | 2525947..2526228 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E44_RS12895 () | 2526225..2526452 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E44_RS12900 () | 2526445..2526756 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E44_RS12905 () | 2526884..2527102 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E44_RS12910 () | 2527104..2527661 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2527882..2527940 | - | 59 | - | - | Antitoxin Detail |
| C9E44_RS12915 () | 2527952..2528107 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E44_RS12920 () | 2528227..2528571 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E44_RS12925 () | 2528693..2528965 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E44_RS12930 () | 2528967..2530016 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E44_RS12935 () | 2530029..2530334 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E44_RS12940 () | 2530397..2530951 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E44_RS12945 () | 2531176..2531373 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E44_RS12950 () | 2531509..2532222 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E44_RS12965 () | 2532673..2533104 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E44_RS12970 () | 2533101..2533356 | + | 256 | Protein_2479 | DUF3927 family protein | - |
| C9E44_RS12975 () | 2533582..2535432 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E44_RS12980 () | 2535872..2536087 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E44_RS12985 () | 2536092..2536436 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E44_RS12990 () | 2536487..2537020 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E44_RS12995 () | 2537291..2537860 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E44_RS13000 () | 2537860..2538006 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E44_RS13005 () | 2538229..2538414 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E44_RS13010 () | 2538940..2539254 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E44_RS13015 () | 2539336..2539560 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E44_RS13025 () | 2539947..2540492 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E44_RS13030 () | 2540467..2542392 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E44_RS13035 () | 2542389..2542595 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E44_RS13040 () | 2542592..2544193 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E44_RS13045 () | 2544174..2545493 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E44_RS13050 () | 2545503..2545835 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E44_RS13055 () | 2545891..2546916 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E44_RS13060 () | 2546958..2547356 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E44_RS13065 () | 2547368..2547721 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E44_RS13070 () | 2547736..2548269 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E44_RS13075 () | 2548266..2548661 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E44_RS13080 () | 2548669..2549421 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E44_RS13085 () | 2549435..2549857 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E44_RS13090 () | 2549884..2550297 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E44_RS13095 () | 2550278..2552890 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E44_RS13100 () | 2552887..2553216 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E44_RS13105 () | 2553216..2553914 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E44_RS13110 () | 2553925..2554668 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E44_RS13115 () | 2554614..2555246 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E44_RS13120 () | 2555493..2558972 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| C9E44_RS13125 () | 2559040..2559639 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E44_RS13130 () | 2559704..2561017 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E44_RS13135 () | 2561019..2561288 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E44_RS13140 () | 2561402..2561977 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E44_RS13145 () | 2562050..2562679 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E44_RS13150 () | 2562761..2563402 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E44_RS13160 () | 2563564..2563806 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E44_RS13165 () | 2563938..2565221 | + | 1284 | Protein_2516 | MHS family MFS transporter YdfJ | - |
| C9E44_RS13170 () | 2565310..2566770 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E44_RS13175 () | 2566806..2567009 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E44_RS13180 () | 2567186..2567872 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E44_RS13185 () | 2567961..2568707 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|