MGE detailed information
MGE type: Prophage MGE length: 116925 bp
Accession: NZ_CP028668 Location: 2507154..2624078 Organism: Escherichia coli strain 117 Replicon: chromosome
Accession: NZ_CP028668 Location: 2507154..2624078 Organism: Escherichia coli strain 117 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E46_RS12800 () | 2503054..2504274 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E46_RS12805 () | 2504399..2505094 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E46_RS12810 () | 2505047..2506339 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E46_RS12815 () | 2506497..2507111 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E46_RS12820 () | 2507154..2508008 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E46_RS12825 () | 2508010..2508627 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E46_RS12830 () | 2508638..2511061 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E46_RS12835 () | 2511122..2513548 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E46_RS12840 () | 2513747..2514052 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E46_RS12845 () | 2514160..2514870 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E46_RS12850 () | 2514873..2515433 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E46_RS12855 () | 2515468..2515809 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E46_RS12860 () | 2515944..2516270 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E46_RS12870 () | 2517040..2517224 | - | 185 | Protein_2461 | DUF3596 domain-containing protein | - |
| C9E46_RS12875 () | 2517259..2517510 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E46_RS12880 () | 2517583..2520054 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E46_RS12885 () | 2520147..2520338 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E46_RS12890 () | 2520335..2520523 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E46_RS12900 () | 2521092..2521310 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E46_RS12905 () | 2521382..2521681 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E46_RS12910 () | 2522034..2522312 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E46_RS12915 () | 2522314..2522505 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E46_RS12920 () | 2522526..2522897 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E46_RS12925 () | 2522995..2523297 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E46_RS12930 () | 2523294..2523719 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E46_RS12935 () | 2523742..2524704 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E46_RS12940 () | 2524711..2525451 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E46_RS12945 () | 2525477..2526246 | + | 770 | Protein_2475 | DUF1627 domain-containing protein | - |
| C9E46_RS12950 () | 2526262..2526657 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E46_RS12955 () | 2526714..2527298 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E46_RS12960 () | 2527414..2527518 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E46_RS12965 () | 2527764..2527919 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E46_RS12970 () | 2528087..2528365 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E46_RS12975 () | 2528367..2529416 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E46_RS12980 () | 2529429..2529788 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E46_RS12985 () | 2529785..2530474 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E46_RS13010 () | 2531111..2531539 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E46_RS13015 () | 2531536..2531791 | + | 256 | Protein_2485 | DUF3927 family protein | - |
| C9E46_RS13020 () | 2532018..2533868 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E46_RS13025 () | 2534308..2534523 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E46_RS13030 () | 2534528..2534872 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E46_RS13035 () | 2534923..2535456 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E46_RS13040 () | 2535725..2536294 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E46_RS13045 () | 2536294..2536440 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E46_RS13055 () | 2536668..2536853 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E46_RS13060 () | 2537278..2537505 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E46_RS13065 () | 2537547..2537912 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E46_RS13075 () | 2538202..2538765 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E46_RS13080 () | 2538762..2540423 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E46_RS13085 () | 2540487..2542424 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E46_RS13090 () | 2542469..2542690 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E46_RS13095 () | 2542636..2545137 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| C9E46_RS13100 () | 2545217..2545543 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C9E46_RS13105 () | 2545553..2545903 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E46_RS13110 () | 2545900..2546346 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E46_RS13115 () | 2546343..2546687 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E46_RS13120 () | 2546746..2547462 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E46_RS13125 () | 2547468..2547842 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E46_RS13130 () | 2547938..2548147 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E46_RS13135 () | 2548200..2551442 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E46_RS13140 () | 2551435..2551776 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E46_RS13145 () | 2551776..2552474 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E46_RS13150 () | 2552485..2553228 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E46_RS13155 () | 2553174..2553806 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E46_RS13160 () | 2554149..2555324 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E46_RS13165 () | 2555276..2557621 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E46_RS13170 () | 2557689..2558288 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| C9E46_RS13175 () | 2558440..2559753 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E46_RS13180 () | 2559755..2560024 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E46_RS13185 () | 2560137..2560711 | + | 575 | Protein_2517 | hypothetical protein | VF |
| C9E46_RS13190 () | 2561051..2562376 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E46_RS13200 () | 2563037..2563951 | - | 915 | Protein_2519 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E46_RS13205 () | 2563965..2564075 | + | 111 | Protein_2520 | type III effector | - |
| C9E46_RS13210 () | 2564122..2564756 | - | 635 | Protein_2521 | IS256 family transposase ISEic2 | Transposase |
| C9E46_RS13215 () | 2565041..2566579 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E46_RS13220 () | 2566629..2566976 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E46_RS13225 () | 2566973..2567353 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E46_RS13230 () | 2567693..2567971 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E46_RS13235 () | 2568399..2568545 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E46_RS13240 () | 2568682..2569329 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E46_RS13245 () | 2569513..2570103 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E46_RS13250 () | 2570322..2571378 | - | 1057 | Protein_2529 | IS630 family transposase | - |
| C9E46_RS13255 () | 2571610..2572260 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E46_RS13260 () | 2572419..2572654 | + | 236 | Protein_2531 | IS3 family transposase | - |
| C9E46_RS13270 () | 2573389..2573514 | + | 126 | Protein_2532 | outer membrane protein OmpW | - |
| C9E46_RS13275 () | 2573560..2574690 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E46_RS13280 () | 2574668..2574916 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E46_RS13285 () | 2574981..2575748 | - | 768 | WP_194165168.1 | exonuclease | - |
| C9E46_RS13290 () | 2575786..2576999 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C9E46_RS13295 () | 2577038..2578738 | - | 1701 | Protein_2537 | exonuclease | - |
| C9E46_RS13300 () | 2578831..2579019 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E46_RS13305 () | 2579016..2579204 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E46_RS13315 () | 2579769..2579978 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E46_RS13320 () | 2579979..2580617 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E46_RS13325 () | 2580629..2580781 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E46_RS13330 () | 2581074..2581412 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E46_RS13335 () | 2581804..2582046 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E46_RS13340 () | 2582030..2582455 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E46_RS13345 () | 2582524..2583567 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E46_RS13350 () | 2583560..2584021 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E46_RS13355 () | 2584055..2584771 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E46_RS13360 () | 2584804..2585085 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E46_RS13365 () | 2585082..2585309 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E46_RS13370 () | 2585302..2585613 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E46_RS13375 () | 2585741..2585959 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E46_RS13380 () | 2585961..2586518 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2586739..2586797 | - | 59 | - | - | Antitoxin Detail |
| C9E46_RS13385 () | 2586809..2586964 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E46_RS13390 () | 2587084..2587428 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E46_RS13395 () | 2587550..2587822 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E46_RS13400 () | 2587824..2588873 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E46_RS13405 () | 2588886..2589191 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E46_RS13410 () | 2589254..2589808 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E46_RS13415 () | 2590033..2590230 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E46_RS13420 () | 2590366..2591079 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E46_RS13435 () | 2591530..2591961 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E46_RS13440 () | 2591958..2592213 | + | 256 | Protein_2563 | DUF3927 family protein | - |
| C9E46_RS13445 () | 2592439..2594289 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E46_RS13450 () | 2594729..2594944 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E46_RS13455 () | 2594949..2595293 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E46_RS13460 () | 2595344..2595877 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E46_RS13465 () | 2596148..2596717 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E46_RS13470 () | 2596717..2596863 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E46_RS13475 () | 2597086..2597271 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E46_RS13480 () | 2597797..2598111 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E46_RS13485 () | 2598193..2598417 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E46_RS13495 () | 2598804..2599349 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E46_RS13500 () | 2599324..2601249 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E46_RS13505 () | 2601246..2601452 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E46_RS13510 () | 2601449..2603050 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E46_RS13515 () | 2603031..2604350 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E46_RS13520 () | 2604360..2604692 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E46_RS13525 () | 2604748..2605773 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E46_RS13530 () | 2605815..2606213 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E46_RS13535 () | 2606225..2606578 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E46_RS13540 () | 2606593..2607126 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E46_RS13545 () | 2607123..2607518 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E46_RS13550 () | 2607526..2608278 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E46_RS13555 () | 2608292..2608714 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E46_RS13560 () | 2608741..2609154 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E46_RS13565 () | 2609135..2611747 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E46_RS13570 () | 2611744..2612073 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E46_RS13575 () | 2612073..2612771 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E46_RS13580 () | 2612782..2613525 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E46_RS13585 () | 2613471..2614103 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E46_RS13590 () | 2614350..2617829 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| C9E46_RS13595 () | 2617897..2618496 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E46_RS13600 () | 2618561..2619874 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E46_RS13605 () | 2619876..2620145 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E46_RS13610 () | 2620259..2620834 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E46_RS13615 () | 2620907..2621536 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E46_RS13620 () | 2621618..2622259 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E46_RS13630 () | 2622421..2622663 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E46_RS13635 () | 2622795..2624078 | + | 1284 | Protein_2600 | MHS family MFS transporter YdfJ | - |
| C9E46_RS13640 () | 2624167..2625627 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E46_RS13645 () | 2625663..2625866 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E46_RS13650 () | 2626043..2626729 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E46_RS13655 () | 2626818..2627564 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|