MGE detailed information
MGE type: Prophage MGE length: 106055 bp
Accession: NZ_CP028650 Location: 2992409..3098463 Organism: Escherichia coli strain 124 Replicon: chromosome
Accession: NZ_CP028650 Location: 2992409..3098463 Organism: Escherichia coli strain 124 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E53_RS15555 () | 2988923..2989669 | + | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C9E53_RS15560 () | 2989758..2990444 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E53_RS15565 () | 2990621..2990824 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E53_RS15570 () | 2990860..2992320 | - | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E53_RS15575 () | 2992409..2993692 | - | 1284 | Protein_2965 | MHS family MFS transporter YdfJ | - |
| C9E53_RS15580 () | 2993824..2994066 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E53_RS15590 () | 2994228..2994869 | - | 642 | WP_001143808.1 | hypothetical protein | VF |
| C9E53_RS15595 () | 2994951..2995580 | - | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E53_RS15600 () | 2995653..2996228 | - | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E53_RS15605 () | 2996342..2996611 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E53_RS15610 () | 2996613..2997836 | - | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C9E53_RS15615 () | 2997901..2998500 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E53_RS15620 () | 2998568..3002047 | - | 3480 | WP_137063730.1 | host specificity protein J | - |
| C9E53_RS15625 () | 3002288..3002917 | - | 630 | WP_127446151.1 | tail assembly protein | - |
| C9E53_RS15630 () | 3002863..3003606 | - | 744 | WP_000194798.1 | C40 family peptidase | - |
| C9E53_RS15635 () | 3003617..3004315 | - | 699 | WP_001301816.1 | phage minor tail protein L | - |
| C9E53_RS15640 () | 3004315..3004644 | - | 330 | WP_000847298.1 | phage tail protein | - |
| C9E53_RS15645 () | 3004641..3005405 | - | 765 | WP_115801854.1 | phage tail tape measure protein | - |
| C9E53_RS15650 () | 3005357..3007048 | - | 1692 | WP_205695272.1 | phage tail length tape measure family protein | - |
| C9E53_RS15655 () | 3007233..3007646 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E53_RS15660 () | 3007673..3008095 | - | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E53_RS15665 () | 3008109..3008861 | - | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E53_RS15670 () | 3008869..3009264 | - | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E53_RS15675 () | 3009261..3009794 | - | 534 | WP_000975020.1 | phage tail protein | - |
| C9E53_RS15680 () | 3009809..3010162 | - | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E53_RS15685 () | 3010174..3010572 | - | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E53_RS15690 () | 3010614..3011639 | - | 1026 | WP_000063265.1 | major capsid protein | - |
| C9E53_RS15695 () | 3011695..3012027 | - | 333 | WP_001295978.1 | head decoration protein | - |
| C9E53_RS15700 () | 3012037..3013356 | - | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E53_RS15705 () | 3013337..3014938 | - | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E53_RS15710 () | 3014935..3015141 | - | 207 | WP_000198153.1 | gpW family protein | - |
| C9E53_RS15715 () | 3015138..3017063 | - | 1926 | WP_001027223.1 | phage terminase large subunit family protein | - |
| C9E53_RS15720 () | 3017038..3017583 | - | 546 | WP_000867493.1 | terminase small subunit | - |
| C9E53_RS15730 () | 3017970..3018194 | + | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E53_RS15735 () | 3018276..3018590 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E53_RS15740 () | 3019116..3019301 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E53_RS15745 () | 3019524..3019670 | - | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E53_RS15750 () | 3019670..3020239 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E53_RS15755 () | 3020510..3021043 | - | 534 | WP_000992137.1 | lysozyme | - |
| C9E53_RS15760 () | 3021094..3021438 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E53_RS15765 () | 3021443..3021658 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E53_RS15770 () | 3022097..3023947 | - | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E53_RS15775 () | 3024173..3024428 | - | 256 | Protein_3003 | DUF3927 family protein | - |
| C9E53_RS15780 () | 3024425..3024856 | - | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E53_RS15795 () | 3025307..3026020 | - | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E53_RS15800 () | 3026156..3026353 | - | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E53_RS15805 () | 3026578..3027132 | - | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E53_RS15810 () | 3027195..3027500 | - | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E53_RS15815 () | 3027513..3028562 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E53_RS15820 () | 3028564..3028836 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E53_RS15825 () | 3028958..3029302 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E53_RS15830 () | 3029422..3029577 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E53_RS15835 () | 3029868..3030425 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| C9E53_RS15840 () | 3030427..3030645 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E53_RS15845 () | 3030773..3031084 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E53_RS15850 () | 3031077..3031304 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E53_RS15855 () | 3031301..3031582 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E53_RS15860 () | 3031615..3032331 | - | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E53_RS15865 () | 3032365..3032826 | - | 462 | WP_000139447.1 | replication protein | - |
| C9E53_RS15870 () | 3032819..3033862 | - | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E53_RS15875 () | 3033931..3034356 | - | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E53_RS15880 () | 3034340..3034582 | - | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E53_RS15885 () | 3034974..3035312 | + | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E53_RS15890 () | 3035605..3035757 | + | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E53_RS15895 () | 3035769..3036407 | + | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E53_RS15900 () | 3036408..3036617 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E53_RS15910 () | 3037182..3037370 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| C9E53_RS15915 () | 3037367..3037555 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| C9E53_RS15920 () | 3037648..3038886 | + | 1239 | Protein_3029 | exonuclease | - |
| C9E53_RS15925 () | 3038874..3039425 | + | 552 | Protein_3030 | Putative defective protein IntQ ; Integrase | Integrase |
| C9E53_RS15930 () | 3039603..3039845 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E53_RS15935 () | 3039895..3040713 | - | 819 | Protein_3032 | IS256 family transposase IS1414 | Transposase |
| C9E53_RS15940 () | 3040808..3041188 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E53_RS15945 () | 3041185..3041532 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E53_RS15950 () | 3041582..3043120 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E53_RS15955 () | 3043158..3043553 | - | 396 | Protein_3036 | IS256 family transposase ISEic2 | Transposase |
| C9E53_RS15960 () | 3043703..3044353 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| C9E53_RS15970 () | 3045064..3045639 | - | 576 | Protein_3038 | hypothetical protein | VF |
| C9E53_RS15975 () | 3045753..3046022 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E53_RS15980 () | 3046024..3047247 | - | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C9E53_RS15985 () | 3047312..3047911 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E53_RS28575 () | 3047979..3048634 | - | 656 | Protein_3042 | DUF3672 domain-containing protein | - |
| C9E53_RS28580 () | 3048662..3050158 | - | 1497 | Protein_3043 | DUF1983 domain-containing protein | - |
| C9E53_RS15995 () | 3050249..3051453 | - | 1205 | Protein_3044 | phage tail protein | - |
| C9E53_RS16000 () | 3051795..3052427 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E53_RS16005 () | 3052373..3053116 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| C9E53_RS16010 () | 3053127..3053825 | - | 699 | WP_001179481.1 | phage minor tail protein L | - |
| C9E53_RS16015 () | 3053825..3054166 | - | 342 | WP_000807954.1 | phage tail protein | - |
| C9E53_RS16020 () | 3054159..3057401 | - | 3243 | WP_000212822.1 | phage tail tape measure protein | - |
| C9E53_RS16025 () | 3057449..3057658 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| C9E53_RS16030 () | 3057754..3058128 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| C9E53_RS16035 () | 3058143..3058859 | - | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| C9E53_RS16040 () | 3058925..3059269 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E53_RS16045 () | 3059266..3059712 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C9E53_RS16050 () | 3059709..3060059 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| C9E53_RS16055 () | 3060069..3060395 | - | 327 | WP_000126003.1 | head-tail connector protein | - |
| C9E53_RS16060 () | 3060398..3062977 | - | 2580 | WP_001304108.1 | phage portal protein | - |
| C9E53_RS16065 () | 3062923..3063144 | - | 222 | WP_001063094.1 | hypothetical protein | - |
| C9E53_RS16070 () | 3063189..3065126 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| C9E53_RS16075 () | 3065190..3066851 | - | 1662 | WP_001301491.1 | terminase large subunit | - |
| C9E53_RS16080 () | 3066848..3067411 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| C9E53_RS16090 () | 3067701..3068066 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| C9E53_RS16095 () | 3068108..3068335 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E53_RS16100 () | 3068760..3068945 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E53_RS16110 () | 3069173..3069319 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E53_RS16115 () | 3069319..3069888 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E53_RS16120 () | 3070159..3070692 | - | 534 | WP_137063732.1 | lysozyme | - |
| C9E53_RS16125 () | 3070743..3071087 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E53_RS16130 () | 3071092..3071307 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E53_RS16135 () | 3071747..3073597 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| C9E53_RS16140 () | 3073824..3074079 | - | 256 | Protein_3071 | DUF3927 family protein | - |
| C9E53_RS16145 () | 3074076..3074504 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E53_RS16170 () | 3075143..3075832 | - | 690 | WP_001059381.1 | antiterminator | - |
| C9E53_RS16175 () | 3075829..3076188 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E53_RS16180 () | 3076201..3077250 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E53_RS16185 () | 3077252..3077530 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E53_RS16190 () | 3077698..3077853 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E53_RS16195 () | 3078099..3078203 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E53_RS16200 () | 3078319..3078903 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E53_RS16205 () | 3078960..3079355 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E53_RS16210 () | 3079371..3080140 | - | 770 | Protein_3081 | DUF1627 domain-containing protein | - |
| C9E53_RS16215 () | 3080166..3080906 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| C9E53_RS16220 () | 3080913..3081875 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| C9E53_RS16225 () | 3081898..3082323 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E53_RS16230 () | 3082320..3082622 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E53_RS16235 () | 3082720..3083091 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E53_RS16240 () | 3083112..3083303 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E53_RS16245 () | 3083305..3083583 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E53_RS16250 () | 3083936..3084235 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E53_RS16255 () | 3084307..3084525 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E53_RS16265 () | 3085094..3085282 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E53_RS16270 () | 3085279..3085470 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E53_RS16275 () | 3085563..3088034 | + | 2472 | WP_000048458.1 | exonuclease | - |
| C9E53_RS16280 () | 3088107..3088358 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E53_RS16285 () | 3088393..3088580 | + | 188 | Protein_3095 | DUF3596 domain-containing protein | - |
| C9E53_RS16295 () | 3089347..3089673 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E53_RS16300 () | 3089808..3090149 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E53_RS16305 () | 3090184..3090744 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E53_RS16310 () | 3090747..3091457 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E53_RS16315 () | 3091565..3091870 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E53_RS16320 () | 3092069..3094495 | + | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E53_RS16325 () | 3094556..3096979 | + | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E53_RS16330 () | 3096990..3097607 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E53_RS16335 () | 3097609..3098463 | + | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E53_RS16340 () | 3098506..3099120 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E53_RS16345 () | 3099278..3100570 | + | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E53_RS16350 () | 3100523..3101218 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E53_RS16355 () | 3101343..3102563 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA1008 | NC_002695 | 2157035..2254487 | 0.004 |