MGE detailed information
MGE type: Prophage MGE length: 61404 bp
Accession: NZ_CP028650 Location: 2744122..2805525 Organism: Escherichia coli strain 124 Replicon: chromosome
Accession: NZ_CP028650 Location: 2744122..2805525 Organism: Escherichia coli strain 124 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E53_RS14325 () | 2739162..2740193 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| C9E53_RS14330 () | 2740437..2740694 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| C9E53_RS14335 () | 2740744..2741694 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| C9E53_RS14340 () | 2741846..2742598 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| C9E53_RS14345 () | 2742793..2743308 | - | 516 | WP_000945010.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| C9E53_RS14350 () | 2743319..2744080 | - | 762 | Protein_2726 | AbgT family transporter | - |
| C9E53_RS14360 () | 2745379..2746146 | - | 768 | Protein_2728 | AbgT family transporter | - |
| C9E53_RS14365 () | 2746183..2747628 | - | 1446 | WP_001156434.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| C9E53_RS14370 () | 2747628..2748938 | - | 1311 | WP_000444937.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| C9E53_RS14375 () | 2749114..2750022 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| C9E53_RS14380 () | 2750352..2750915 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| C9E53_RS14385 () | 2750936..2752168 | - | 1233 | WP_000628061.1 | diguanylate cyclase DgcM | - |
| C9E53_RS28555 () | 2752362..2752409 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C9E53_RS14390 () | 2752423..2753406 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C9E53_RS28390 () | 2753681..2753851 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| C9E53_RS14400 () | 2753884..2755257 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| C9E53_RS14405 () | 2755386..2756321 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C9E53_RS14410 () | 2756373..2757608 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C9E53_RS14415 () | 2757610..2757825 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C9E53_RS14420 () | 2757925..2758113 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2757929..2758107 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2757929..2758107 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2757929..2758107 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2757929..2758107 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C9E53_RS14425 () | 2758151..2758300 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C9E53_RS14430 () | 2758356..2759165 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| C9E53_RS14435 () | 2759158..2761758 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| C9E53_RS14440 () | 2761860..2762135 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| C9E53_RS14445 () | 2762210..2762380 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| C9E53_RS14450 () | 2762380..2762601 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| C9E53_RS14455 () | 2763043..2763531 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| C9E53_RS14460 () | 2763528..2763683 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| C9E53_RS14465 () | 2763694..2763873 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| C9E53_RS14475 () | 2764116..2764535 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| C9E53_RS14480 () | 2764615..2764869 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| C9E53_RS14485 () | 2764866..2765288 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| C9E53_RS14490 () | 2765366..2766154 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| C9E53_RS14495 () | 2766161..2766907 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| C9E53_RS14500 () | 2766930..2767691 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| C9E53_RS14505 () | 2767707..2768129 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| C9E53_RS14510 () | 2768235..2768447 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| C9E53_RS14515 () | 2768480..2768697 | + | 218 | Protein_2759 | DUF4014 family protein | - |
| C9E53_RS14520 () | 2768699..2768962 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| C9E53_RS14525 () | 2768973..2769134 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| C9E53_RS14530 () | 2769213..2769458 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| C9E53_RS14535 () | 2769890..2771041 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| C9E53_RS14540 () | 2771009..2771998 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| C9E53_RS14545 () | 2771998..2773389 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| C9E53_RS14550 () | 2773889..2774488 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| C9E53_RS14555 () | 2774488..2774778 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| C9E53_RS14560 () | 2774775..2775329 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| C9E53_RS14575 () | 2775891..2776322 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| C9E53_RS14580 () | 2776319..2776574 | + | 256 | Protein_2770 | DUF3927 family protein | - |
| C9E53_RS14585 () | 2776897..2778750 | + | 1854 | WP_000143079.1 | SASA family carbohydrate esterase | - |
| C9E53_RS14590 () | 2778900..2779115 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| C9E53_RS14595 () | 2779120..2779464 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| C9E53_RS14600 () | 2779515..2780048 | + | 534 | WP_000992086.1 | lysozyme | - |
| C9E53_RS14605 () | 2780322..2781017 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| C9E53_RS14610 () | 2781112..2781243 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| C9E53_RS14620 () | 2781466..2781651 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| C9E53_RS14635 () | 2782052..2782378 | + | 327 | WP_000828070.1 | TonB family protein | - |
| C9E53_RS14640 () | 2782510..2782710 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| C9E53_RS14645 () | 2782752..2783117 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| C9E53_RS14650 () | 2783406..2783969 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| C9E53_RS14655 () | 2783966..2785627 | + | 1662 | WP_001411753.1 | terminase large subunit | - |
| C9E53_RS14660 () | 2785691..2787628 | + | 1938 | WP_000173011.1 | phage major capsid protein | - |
| C9E53_RS14665 () | 2787673..2787894 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| C9E53_RS14670 () | 2787840..2790424 | + | 2585 | Protein_2785 | phage portal protein | - |
| C9E53_RS14675 () | 2790421..2790747 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| C9E53_RS14680 () | 2790757..2791107 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| C9E53_RS14685 () | 2791104..2791550 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C9E53_RS14690 () | 2791547..2791891 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| C9E53_RS14695 () | 2791960..2792676 | + | 717 | WP_001275479.1 | immunoglobulin domain-containing protein | - |
| C9E53_RS14700 () | 2792682..2793056 | + | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| C9E53_RS14705 () | 2793152..2793361 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E53_RS14710 () | 2793413..2796493 | + | 3081 | WP_000212768.1 | phage tail tape measure protein | - |
| C9E53_RS14715 () | 2796486..2796827 | + | 342 | WP_000807964.1 | phage tail protein | - |
| C9E53_RS14720 () | 2796827..2797525 | + | 699 | WP_001152159.1 | phage minor tail protein L | - |
| C9E53_RS14725 () | 2797536..2798279 | + | 744 | WP_000194763.1 | C40 family peptidase | - |
| C9E53_RS14730 () | 2798225..2798857 | + | 633 | WP_064732755.1 | tail assembly protein | - |
| C9E53_RS14740 () | 2799048..2799575 | - | 528 | WP_000649829.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| C9E53_RS14745 () | 2799709..2803206 | + | 3498 | WP_000515042.1 | host specificity protein J | - |
| C9E53_RS14750 () | 2803277..2803876 | + | 600 | WP_001230550.1 | Outer membrane protein X | VF |
| C9E53_RS14755 () | 2803941..2805254 | + | 1314 | WP_000268955.1 | ISNCY family transposase KIS | Transposase |
| C9E53_RS14760 () | 2805256..2805525 | + | 270 | WP_001023992.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E53_RS14765 () | 2805638..2806213 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| C9E53_RS14770 () | 2806286..2806915 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| C9E53_RS14775 () | 2806997..2807638 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| C9E53_RS14780 () | 2808219..2808653 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| C9E53_RS14785 () | 2808794..2809907 | - | 1114 | Protein_2807 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA10219 | NC_002695 | 1921609..1970151 | 0.01 |