MGE detailed information
MGE type: Conjugative plasmid MGE length: 67786 bp
Accession: NZ_CP028610 Location: 1..67786 Organism: Escherichia coli strain 142 Replicon: plasmid pTA142-3
Accession: NZ_CP028610 Location: 1..67786 Organism: Escherichia coli strain 142 Replicon: plasmid pTA142-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E66_RS27595 () | 1..858 | + | 858 | WP_000130991.1 | incFII family plasmid replication initiator RepA | - |
| C9E66_RS27605 () | 1771..2040 | + | 270 | WP_000079942.1 | hypothetical protein | Antitoxin Detail |
| C9E66_RS27610 () | 2037..2318 | + | 282 | WP_000970004.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E66_RS27615 () | 2755..2991 | + | 237 | WP_032257624.1 | colicin V immunity protein | - |
| C9E66_RS27620 () | 2969..3280 | + | 312 | WP_001259758.1 | colicin V | - |
| C9E66_RS27625 () | 3450..5564 | - | 2115 | WP_109996808.1 | peptidase domain-containing ABC transporter | - |
| C9E66_RS27630 () | 5539..6813 | - | 1275 | WP_021573925.1 | HlyD family secretion protein | - |
| C9E66_RS27635 () | 7447..8089 | + | 643 | Protein_8 | CPBP family intramembrane metalloprotease | - |
| C9E66_RS27640 () | 8182..8439 | + | 258 | WP_033560241.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C9E66_RS27645 () | 8372..8773 | + | 402 | WP_148722836.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C9E66_RS27650 () | 8889..9284 | - | 396 | WP_000445939.1 | plasmid partitioning/stability family protein | - |
| C9E66_RS27655 () | 9284..10243 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| C9E66_RS27665 () | 10682..11584 | + | 903 | WP_170997482.1 | DUF1281 domain-containing protein | - |
| C9E66_RS27670 () | 11581..11893 | + | 313 | Protein_14 | hypothetical protein | - |
| C9E66_RS27675 () | 11969..12652 | + | 684 | WP_087672695.1 | DNA methylase | - |
| C9E66_RS27680 () | 12653..12874 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| C9E66_RS27685 () | 12888..13322 | + | 435 | WP_087672694.1 | DUF1380 family protein | - |
| C9E66_RS27690 () | 13367..14137 | + | 771 | WP_087672693.1 | hypothetical protein | - |
| C9E66_RS27705 () | 14675..14977 | + | 303 | WP_001364029.1 | antirestriction protein | - |
| C9E66_RS27710 () | 15024..15443 | + | 420 | WP_087672692.1 | DUF1380 family protein | - |
| C9E66_RS27715 () | 15443..15634 | + | 192 | WP_001027048.1 | hypothetical protein | - |
| C9E66_RS29455 () | 15613..15924 | - | 312 | WP_175400449.1 | pilus assembly protein | - |
| C9E66_RS27730 () | 16602..16832 | + | 231 | WP_047083525.1 | hypothetical protein | - |
| C9E66_RS27735 () | 16884..18245 | + | 1362 | WP_087672685.1 | DUF3560 domain-containing protein | - |
| C9E66_RS27740 () | 18292..18855 | + | 564 | WP_032305464.1 | class I SAM-dependent methyltransferase | - |
| C9E66_RS29460 () | 18941..19346 | - | 406 | Protein_26 | hypothetical protein | - |
| C9E66_RS27765 () | 19665..20186 | + | 522 | WP_000290783.1 | single-stranded DNA-binding protein | - |
| C9E66_RS27775 () | 20244..20477 | + | 234 | WP_069192978.1 | DUF905 domain-containing protein | - |
| C9E66_RS27780 () | 20538..22502 | + | 1965 | WP_137052466.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E66_RS27785 () | 22571..23005 | + | 435 | WP_000845923.1 | conjugation system SOS inhibitor PsiB | - |
| C9E66_RS27790 () | 23002..23721 | + | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| C9E66_RS27795 () | 23718..24032 | + | 315 | WP_000872084.1 | hypothetical protein | - |
| - () | 23981..24175 | + | 195 | NuclAT_0 | - | - |
| - () | 23981..24175 | + | 195 | NuclAT_0 | - | - |
| - () | 23981..24175 | + | 195 | NuclAT_0 | - | - |
| - () | 23981..24175 | + | 195 | NuclAT_0 | - | - |
| - () | 23984..24175 | - | 192 | - | - | - |
| C9E66_RS27800 () | 24240..24401 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E66_RS27805 () | 24702..24999 | - | 298 | Protein_34 | hypothetical protein | - |
| C9E66_RS27820 () | 25296..25598 | + | 303 | WP_001272235.1 | hypothetical protein | - |
| C9E66_RS27830 () | 25754..26041 | + | 288 | WP_000107543.1 | hypothetical protein | - |
| C9E66_RS27835 () | 26160..26981 | + | 822 | WP_032107531.1 | DUF945 domain-containing protein | - |
| C9E66_RS27840 () | 27278..27880 | - | 603 | WP_077785958.1 | hypothetical protein | VF |
| C9E66_RS27845 () | 28220..28603 | + | 384 | WP_032210979.1 | relaxosome protein TraM | - |
| C9E66_RS27850 () | 28788..29477 | + | 690 | WP_032305016.1 | conjugal transfer transcriptional regulator TraJ | - |
| C9E66_RS27855 () | 29576..29950 | + | 375 | WP_032305023.1 | conjugal transfer relaxosome protein TraY | - |
| C9E66_RS27860 () | 30006..30359 | + | 354 | WP_021521309.1 | type IV conjugative transfer system pilin TraA | - |
| C9E66_RS27865 () | 30374..30685 | + | 312 | WP_000012099.1 | type IV conjugative transfer system protein TraL | - |
| C9E66_RS27870 () | 30707..31273 | + | 567 | WP_062855974.1 | type IV conjugative transfer system protein TraE | - |
| C9E66_RS27875 () | 31260..31988 | + | 729 | WP_001365587.1 | type-F conjugative transfer system secretin TraK | - |
| C9E66_RS27880 () | 31988..33418 | + | 1431 | WP_000146622.1 | conjugal transfer protein TraB | - |
| C9E66_RS27885 () | 33408..33995 | + | 588 | WP_062855973.1 | conjugal transfer protein TraP | - |
| C9E66_RS27890 () | 33949..34302 | + | 354 | WP_071531746.1 | conjugal transfer protein TrbD | - |
| C9E66_RS27895 () | 34295..34546 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| C9E66_RS27900 () | 34543..35058 | + | 516 | WP_028985436.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C9E66_RS27905 () | 35193..35414 | + | 222 | WP_001278977.1 | conjugal transfer protein TraR | - |
| C9E66_RS27910 () | 35407..35802 | + | 396 | WP_000549593.1 | hypothetical protein | - |
| C9E66_RS27915 () | 35813..36286 | + | 474 | WP_000549599.1 | hypothetical protein | - |
| C9E66_RS27930 () | 36769..37116 | + | 348 | WP_021573904.1 | hypothetical protein | - |
| C9E66_RS27935 () | 37241..39871 | + | 2631 | WP_062855971.1 | type IV secretion system protein TraC | - |
| C9E66_RS27940 () | 39868..40254 | + | 387 | WP_000214090.1 | type-F conjugative transfer system protein TrbI | - |
| C9E66_RS27945 () | 40251..40883 | + | 633 | WP_001203739.1 | type-F conjugative transfer system protein TraW | - |
| C9E66_RS27950 () | 40880..41872 | + | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| C9E66_RS27955 () | 41893..42072 | + | 180 | WP_096936660.1 | hypothetical protein | - |
| C9E66_RS27960 () | 42069..42308 | - | 240 | WP_001066128.1 | hypothetical protein | - |
| C9E66_RS27965 () | 42501..43139 | + | 639 | WP_032305012.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C9E66_RS27970 () | 43136..43516 | + | 381 | WP_032206670.1 | hypothetical protein | - |
| C9E66_RS27975 () | 43676..45514 | + | 1839 | WP_096936665.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C9E66_RS27980 () | 45528..45785 | + | 258 | WP_032305011.1 | conjugal transfer protein TrbE | - |
| C9E66_RS27985 () | 45778..46521 | + | 744 | WP_137052468.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C9E66_RS27990 () | 46535..46876 | + | 342 | WP_000556797.1 | conjugal transfer protein TrbA | - |
| C9E66_RS28000 () | 47272..47562 | + | 291 | WP_021521297.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C9E66_RS28005 () | 47549..48094 | + | 546 | WP_096936666.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C9E66_RS28010 () | 48024..48365 | + | 342 | WP_096936662.1 | P-type conjugative transfer protein TrbJ | - |
| C9E66_RS28015 () | 48313..48738 | + | 426 | WP_071999353.1 | F-type conjugal transfer protein TrbF | - |
| C9E66_RS28020 () | 48725..50098 | + | 1374 | WP_032305007.1 | conjugal transfer protein TraH | - |
| C9E66_RS28025 () | 50095..52917 | + | 2823 | WP_062855967.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C9E66_RS28030 () | 52933..53430 | + | 498 | WP_053293981.1 | entry exclusion protein | - |
| C9E66_RS28035 () | 53462..54193 | + | 732 | WP_033800894.1 | complement resistance protein TraT | - |
| C9E66_RS28040 () | 54397..54876 | + | 480 | WP_001473214.1 | hypothetical protein | - |
| C9E66_RS28045 () | 55158..57383 | + | 2226 | WP_062855966.1 | type IV conjugative transfer system coupling protein TraD | - |
| C9E66_RS28050 () | 57383..62653 | + | 5271 | WP_096936663.1 | Multifunctional conjugation protein TraI | Relaxase |
| C9E66_RS28055 () | 62672..63418 | + | 747 | WP_052921641.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C9E66_RS28060 () | 63501..63869 | + | 369 | WP_000722532.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| C9E66_RS28065 () | 63905..64462 | + | 558 | WP_000139380.1 | fertility inhibition protein FinO | - |
| C9E66_RS28070 () | 64617..64820 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| C9E66_RS28075 () | 65565..66026 | + | 462 | WP_000760088.1 | thermonuclease family protein | - |
| C9E66_RS28080 () | 66129..66512 | + | 384 | WP_001109063.1 | hypothetical protein | - |
| - () | 66687..66743 | - | 57 | NuclAT_1 | - | - |
| - () | 66687..66743 | - | 57 | NuclAT_1 | - | - |
| - () | 66687..66743 | - | 57 | NuclAT_1 | - | - |
| - () | 66687..66743 | - | 57 | NuclAT_1 | - | - |
| C9E66_RS28090 () | 66735..66941 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E66_RS28095 () | 67225..67473 | + | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|