MGE detailed information
MGE type: Conjugative plasmid MGE length: 76698 bp
Accession: NZ_CP028431 Location: 1..76698 Organism: Escherichia coli strain RM9131 Replicon: plasmid pRM9131-2
Accession: NZ_CP028431 Location: 1..76698 Organism: Escherichia coli strain RM9131 Replicon: plasmid pRM9131-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM9131_RS28470 () | 13..870 | + | 858 | WP_000130993.1 | incFII family plasmid replication initiator RepA | - |
| ECRM9131_RS28485 () | 1573..1833 | + | 261 | WP_001344604.1 | hypothetical protein | - |
| ECRM9131_RS28490 () | 1846..2085 | + | 240 | WP_000859016.1 | MarR family transcriptional regulator | - |
| ECRM9131_RS28495 () | 2289..3476 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM9131_RS28500 () | 3476..3841 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM9131_RS28505 () | 3980..4234 | - | 255 | WP_000997720.1 | hypothetical protein | - |
| ECRM9131_RS28515 () | 4741..8706 | - | 3966 | WP_001034091.1 | Serine protease EspP | VF |
| ECRM9131_RS28530 () | 10293..10799 | + | 507 | Protein_9 | IS3 family transposase | - |
| ECRM9131_RS28535 () | 10879..11274 | - | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| ECRM9131_RS28540 () | 11274..12233 | - | 960 | WP_000921961.1 | plasmid segregation protein ParM | - |
| ECRM9131_RS28545 () | 12506..13408 | + | 903 | WP_077629034.1 | DUF1281 domain-containing protein | - |
| ECRM9131_RS28550 () | 13405..13717 | + | 313 | Protein_13 | hypothetical protein | - |
| ECRM9131_RS28555 () | 13793..14164 | + | 372 | WP_000086162.1 | restriction endonuclease subunit M | - |
| ECRM9131_RS28560 () | 14271..15458 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM9131_RS28565 () | 15458..15823 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM9131_RS28580 () | 16196..16498 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| ECRM9131_RS28585 () | 16545..16967 | + | 423 | WP_000271680.1 | DUF1380 family protein | - |
| ECRM9131_RS28590 () | 16964..17155 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| ECRM9131_RS28605 () | 18193..18423 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| ECRM9131_RS28610 () | 18475..19836 | + | 1362 | WP_000170683.1 | DUF3560 domain-containing protein | - |
| ECRM9131_RS28615 () | 19883..20445 | + | 563 | Protein_22 | class I SAM-dependent methyltransferase | - |
| ECRM9131_RS28625 () | 20597..20857 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| ECRM9131_RS28645 () | 21330..21857 | + | 528 | WP_000290792.1 | single-stranded DNA-binding protein | - |
| ECRM9131_RS28650 () | 21913..22146 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| ECRM9131_RS28655 () | 22205..24163 | + | 1959 | WP_001145472.1 | ParB/RepB/Spo0J family partition protein | - |
| ECRM9131_RS28660 () | 24218..24652 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| ECRM9131_RS28665 () | 24649..25368 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| ECRM9131_RS29350 () | 25380..25568 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 25380..25604 | + | 225 | NuclAT_0 | - | - |
| - () | 25380..25604 | + | 225 | NuclAT_0 | - | - |
| - () | 25380..25604 | + | 225 | NuclAT_0 | - | - |
| - () | 25380..25604 | + | 225 | NuclAT_0 | - | - |
| - () | 25537..25602 | + | 66 | - | - | Antitoxin Detail |
| ECRM9131_RS28670 () | 25648..25806 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| ECRM9131_RS28690 () | 26728..27015 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| ECRM9131_RS28695 () | 27136..27957 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| ECRM9131_RS28700 () | 28254..28763 | - | 510 | Protein_33 | transglycosylase SLT domain-containing protein | - |
| ECRM9131_RS28705 () | 29177..29560 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| ECRM9131_RS28710 () | 29747..30436 | + | 690 | WP_000283394.1 | conjugal transfer transcriptional regulator TraJ | - |
| ECRM9131_RS28715 () | 30535..30930 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| ECRM9131_RS28720 () | 30963..31322 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| ECRM9131_RS28725 () | 31337..31648 | + | 312 | WP_000012104.1 | type IV conjugative transfer system protein TraL | - |
| ECRM9131_RS28730 () | 31670..32236 | + | 567 | WP_000399800.1 | type IV conjugative transfer system protein TraE | - |
| ECRM9131_RS28735 () | 32247..32951 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| ECRM9131_RS28740 () | 32951..34378 | + | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| ECRM9131_RS28745 () | 34368..34958 | + | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| ECRM9131_RS28750 () | 34945..35067 | + | 123 | WP_001369729.1 | DUF2689 domain-containing protein | - |
| ECRM9131_RS28755 () | 35048..35647 | + | 600 | Protein_44 | conjugal transfer protein TraH | - |
| ECRM9131_RS28760 () | 35644..36807 | + | 1164 | Protein_45 | conjugal transfer mating pair stabilization protein TraG | - |
| ECRM9131_RS28770 () | 38115..39782 | + | 1668 | Protein_47 | conjugal transfer protein TraG | - |
| ECRM9131_RS28775 () | 39779..40288 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| ECRM9131_RS28780 () | 40302..41033 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| ECRM9131_RS28785 () | 41286..43439 | + | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| ECRM9131_RS28790 () | 43439..48709 | + | 5271 | WP_000986985.1 | Multifunctional conjugation protein TraI | Relaxase |
| ECRM9131_RS28795 () | 48729..49475 | + | 747 | WP_000205714.1 | conjugal transfer pilus acetylase TraX | - |
| ECRM9131_RS28800 () | 49534..50394 | + | 861 | WP_000704529.1 | putative protein YcjY | VF |
| ECRM9131_RS28805 () | 50497..51057 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| ECRM9131_RS28810 () | 51207..51587 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM9131_RS28815 () | 51584..51932 | + | 349 | Protein_56 | IS66 family transposase ISEc8 | Transposase |
| ECRM9131_RS28820 () | 51982..53520 | + | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM9131_RS28825 () | 53583..53771 | - | 189 | Protein_58 | hypothetical protein | - |
| ECRM9131_RS28830 () | 53824..54822 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| ECRM9131_RS28835 () | 54896..56617 | - | 1722 | WP_000550555.1 | phosphoethanolamine transferase CptA | - |
| ECRM9131_RS28840 () | 56711..57817 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| ECRM9131_RS28845 () | 57817..58638 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| ECRM9131_RS28855 () | 60110..60262 | + | 153 | Protein_63 | IS3 family transposase IS1203 | Transposase |
| ECRM9131_RS28860 () | 60451..61638 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| ECRM9131_RS28865 () | 61638..62003 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| ECRM9131_RS28870 () | 62094..62590 | + | 497 | Protein_66 | IS3 family transposase IS629 | Transposase |
| ECRM9131_RS28880 () | 63113..63628 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| ECRM9131_RS28885 () | 63630..66626 | + | 2997 | WP_000217744.1 | Hemolysin, chromosomal | VF |
| ECRM9131_RS28890 () | 66676..68796 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| ECRM9131_RS28895 () | 68800..70239 | + | 1440 | WP_001213544.1 | Hemolysin secretion protein D, chromosomal | VF |
| ECRM9131_RS28900 () | 70366..71019 | - | 654 | Protein_71 | IS3 family transposase ISEc48 | Transposase |
| ECRM9131_RS28905 () | 71058..72596 | - | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM9131_RS28910 () | 72646..72994 | - | 349 | Protein_73 | IS66 family transposase ISEc8 | Transposase |
| ECRM9131_RS28915 () | 72991..73371 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| ECRM9131_RS28920 () | 73463..73996 | + | 534 | Protein_75 | IS66 family transposase ISEc8 | Transposase |
| ECRM9131_RS28925 () | 74114..74326 | + | 213 | WP_001369432.1 | ANR family transcriptional regulator | - |
| ECRM9131_RS28930 () | 74571..75032 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| ECRM9131_RS28935 () | 75078..75287 | + | 210 | WP_001369435.1 | hemolysin expression modulator Hha | - |
| ECRM9131_RS28940 () | 75325..75912 | + | 588 | WP_000766809.1 | DUF2726 domain-containing protein | - |
| ECRM9131_RS28945 () | 76152..76409 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|