MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98989 bp
Accession: NZ_CP028315 Location: 1..98989 Organism: Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 Replicon: plasmid pSC-31-1
Accession: NZ_CP028315 Location: 1..98989 Organism: Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 Replicon: plasmid pSC-31-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7X12_RS24055 () | 315..998 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| C7X12_RS24065 () | 1252..1785 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| C7X12_RS24075 () | 2227..2514 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| C7X12_RS24080 () | 2432..2695 | - | 264 | WP_001324596.1 | ash family protein | - |
| C7X12_RS24095 () | 3668..4699 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| C7X12_RS24110 () | 5608..5877 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| C7X12_RS24115 () | 5874..6155 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C7X12_RS24120 () | 6195..7043 | + | 849 | WP_001057992.1 | 3'-5' exonuclease | - |
| C7X12_RS24125 () | 7160..7633 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| C7X12_RS26030 () | 8110..8376 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| C7X12_RS24140 () | 8376..8870 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| C7X12_RS24145 () | 8926..9528 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| C7X12_RS24155 () | 9882..10766 | + | 885 | Protein_13 | hypothetical protein | - |
| C7X12_RS24160 () | 10949..12211 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| C7X12_RS24165 () | 12535..13680 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| C7X12_RS24170 () | 13774..14307 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| C7X12_RS24175 () | 14304..14621 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| C7X12_RS24180 () | 14673..15143 | + | 471 | Protein_18 | hypothetical protein | - |
| C7X12_RS24185 () | 15422..17302 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| C7X12_RS24190 () | 17320..17667 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| C7X12_RS24195 () | 17786..18133 | + | 348 | WP_000142436.1 | hypothetical protein | - |
| C7X12_RS24200 () | 18151..18741 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| C7X12_RS24205 () | 18741..18995 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| C7X12_RS24210 () | 19347..20348 | + | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| C7X12_RS24215 () | 20524..20868 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| C7X12_RS24220 () | 21367..21621 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| C7X12_RS24225 () | 21666..22592 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| C7X12_RS24235 () | 23150..23368 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C7X12_RS24240 () | 23370..23675 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C7X12_RS24245 () | 23676..24482 | + | 807 | WP_000016969.1 | site-specific integrase | - |
| C7X12_RS24250 () | 24662..25306 | + | 645 | WP_001144036.1 | ParA family protein | - |
| C7X12_RS24255 () | 25393..25701 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| C7X12_RS24260 () | 26115..27095 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| C7X12_RS24265 () | 27088..27504 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| C7X12_RS24270 () | 27506..28780 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| C7X12_RS24275 () | 28780..29217 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C7X12_RS24280 () | 29214..29462 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| C7X12_RS24290 () | 29880..30782 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| C7X12_RS24295 () | 30779..31090 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| C7X12_RS24300 () | 31167..31850 | + | 684 | WP_000086178.1 | DNA methylase | - |
| C7X12_RS24305 () | 31851..32072 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| C7X12_RS24310 () | 32084..32518 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| C7X12_RS24315 () | 32569..33339 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| C7X12_RS24325 () | 33757..34182 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| C7X12_RS24330 () | 34229..34651 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| C7X12_RS24335 () | 34648..34839 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| C7X12_RS26035 () | 35172..35240 | - | 69 | Protein_47 | pilus protein | - |
| C7X12_RS24345 () | 35609..36136 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| C7X12_RS24350 () | 36194..36427 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| C7X12_RS24355 () | 36486..38444 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| C7X12_RS24360 () | 38499..38933 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| C7X12_RS24365 () | 38930..39649 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| C7X12_RS24370 () | 39779..40954 | + | 1176 | WP_000942657.1 | transposase | - |
| C7X12_RS25880 () | 41401..41901 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| C7X12_RS24390 () | 42630..43064 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| C7X12_RS24395 () | 43158..43424 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| C7X12_RS24400 () | 43489..44391 | + | 903 | WP_000038404.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| C7X12_RS24405 () | 44391..44672 | + | 282 | WP_001334682.1 | hypothetical protein | - |
| C7X12_RS24410 () | 44703..44954 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C7X12_RS24420 () | 45535..46383 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| C7X12_RS24425 () | 46469..46804 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C7X12_RS24430 () | 47038..47370 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| C7X12_RS24435 () | 47381..50080 | + | 2700 | WP_032163764.1 | IncI1-type relaxase NikB | - |
| C7X12_RS24440 () | 50117..52408 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| C7X12_RS24445 () | 52401..53471 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| C7X12_RS24450 () | 53490..54698 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| C7X12_RS24455 () | 54990..55142 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| C7X12_RS24460 () | 55214..55465 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| C7X12_RS24465 () | 55826..56608 | - | 783 | WP_001300609.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| C7X12_RS24470 () | 56605..57627 | - | 1023 | WP_001572805.1 | IS21-like element IS100 family transposase | - |
| C7X12_RS25885 () | 58348..58524 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| C7X12_RS24485 () | 58916..59125 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| C7X12_RS24490 () | 59197..59859 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C7X12_RS24495 () | 59930..62098 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| C7X12_RS24500 () | 62195..62779 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| C7X12_RS24505 () | 62808..64010 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| C7X12_RS24510 () | 63977..64591 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| C7X12_RS24515 () | 64591..67635 | - | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| C7X12_RS24520 () | 67725..68525 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| C7X12_RS24525 () | 68509..68697 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| C7X12_RS24530 () | 68761..69165 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| C7X12_RS24535 () | 69216..69743 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| C7X12_RS24540 () | 69743..70447 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| C7X12_RS24545 () | 70447..71736 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| C7X12_RS24550 () | 71739..72722 | - | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| C7X12_RS24555 () | 72733..73425 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| C7X12_RS24560 () | 73422..73769 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| C7X12_RS24565 () | 73787..77554 | - | 3768 | WP_001141535.1 | hypothetical protein | - |
| C7X12_RS24570 () | 77644..78195 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| C7X12_RS24575 () | 78210..78500 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| C7X12_RS24580 () | 78497..79645 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| C7X12_RS24585 () | 79642..80460 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| C7X12_RS24590 () | 80457..80915 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| C7X12_RS24595 () | 81310..81894 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| C7X12_RS24600 () | 81954..83156 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| C7X12_RS24605 () | 83242..84066 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| C7X12_RS24610 () | 84217..85371 | - | 1155 | WP_001139958.1 | integrase | - |
| C7X12_RS24625 () | 86301..87589 | - | 1289 | Protein_98 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| C7X12_RS24630 () | 87589..88245 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| C7X12_RS24635 () | 88230..88790 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| C7X12_RS24640 () | 88800..89414 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| C7X12_RS24645 () | 89432..90529 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| C7X12_RS24650 () | 90542..92095 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| C7X12_RS24655 () | 92106..92558 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| C7X12_RS24660 () | 92545..93840 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| C7X12_RS24665 () | 93833..95515 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| C7X12_RS24670 () | 95529..95966 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| C7X12_RS24675 () | 95966..97033 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| C7X12_RS24685 () | 97707..98159 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| C7X12_RS24690 () | 98202..98456 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|