MGE detailed information
MGE type: Conjugative plasmid MGE length: 52918 bp
Accession: NZ_CP028193 Location: 1..52918 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_2
Accession: NZ_CP028193 Location: 1..52918 Organism: Escherichia coli strain CFSAN018748 Replicon: plasmid pGMI14-004_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A99_RS26160 () | 216..776 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| C7A99_RS26165 () | 831..1577 | - | 747 | WP_070751406.1 | conjugal transfer pilus acetylase TraX | - |
| C7A99_RS26170 () | 1597..6867 | - | 5271 | WP_107236344.1 | Multifunctional conjugation protein TraI | Relaxase |
| C7A99_RS26175 () | 6867..9110 | - | 2244 | WP_086185996.1 | type IV conjugative transfer system coupling protein TraD | - |
| C7A99_RS26180 () | 9161..9898 | - | 738 | WP_000199900.1 | hypothetical protein | - |
| C7A99_RS26185 () | 10101..10832 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| C7A99_RS26190 () | 10864..11367 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| C7A99_RS26195 () | 11382..14204 | - | 2823 | WP_062873754.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C7A99_RS26200 () | 14201..15574 | - | 1374 | WP_053264201.1 | conjugal transfer protein TraH | - |
| C7A99_RS26205 () | 15561..15953 | - | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| C7A99_RS26210 () | 15907..16281 | - | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| C7A99_RS26215 () | 16211..16756 | - | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C7A99_RS26220 () | 16743..17027 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C7A99_RS26225 () | 17146..17493 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| C7A99_RS26230 () | 17509..18252 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C7A99_RS26235 () | 18245..18502 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| C7A99_RS26240 () | 18529..20337 | - | 1809 | WP_107236345.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C7A99_RS26245 () | 20334..20972 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C7A99_RS26250 () | 21000..21452 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| C7A99_RS26255 () | 21482..21943 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| C7A99_RS26260 () | 21969..22961 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| C7A99_RS26265 () | 22958..23590 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| C7A99_RS26270 () | 23587..23973 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| C7A99_RS26275 () | 23970..26597 | - | 2628 | WP_039021964.1 | type IV secretion system protein TraC | - |
| C7A99_RS26280 () | 26757..26978 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| C7A99_RS26285 () | 27112..27627 | - | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C7A99_RS26290 () | 27624..27992 | - | 369 | WP_001312858.1 | conjugal transfer protein TrbD | - |
| C7A99_RS26295 () | 27931..28518 | - | 588 | WP_000002771.1 | conjugal transfer protein TraP | - |
| C7A99_RS26300 () | 28508..29935 | - | 1428 | WP_000146635.1 | conjugal transfer protein TraB | - |
| C7A99_RS26305 () | 29935..30639 | - | 705 | WP_159042854.1 | type-F conjugative transfer system secretin TraK | - |
| C7A99_RS26310 () | 30650..31216 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| C7A99_RS26315 () | 31238..31549 | - | 312 | WP_000012125.1 | type IV conjugative transfer system protein TraL | - |
| C7A99_RS26320 () | 31554..31916 | - | 363 | WP_107236346.1 | type IV conjugative transfer system pilin TraA | - |
| C7A99_RS26325 () | 31949..32344 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| C7A99_RS26330 () | 32443..33132 | - | 690 | WP_107236347.1 | conjugal transfer transcriptional regulator TraJ | - |
| C7A99_RS26335 () | 33319..33702 | - | 384 | WP_107236348.1 | relaxosome protein TraM | - |
| C7A99_RS26340 () | 34023..34625 | + | 603 | WP_077638166.1 | hypothetical protein | VF |
| C7A99_RS26345 () | 34922..35743 | - | 822 | WP_016235962.1 | DUF945 domain-containing protein | - |
| C7A99_RS26350 () | 35854..36039 | - | 186 | Protein_38 | hypothetical protein | - |
| C7A99_RS26355 () | 36275..36577 | - | 303 | WP_000379301.1 | hypothetical protein | - |
| C7A99_RS26360 () | 36653..36886 | - | 234 | WP_000093744.1 | hypothetical protein | - |
| C7A99_RS26365 () | 37314..37601 | - | 288 | WP_000606467.1 | hypothetical protein | - |
| C7A99_RS26370 () | 37906..38199 | - | 294 | WP_000673428.1 | hypothetical protein | - |
| C7A99_RS26380 () | 38770..39012 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| C7A99_RS26385 () | 39009..39263 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| C7A99_RS26390 () | 39260..39802 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| C7A99_RS26395 () | 39906..40421 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| C7A99_RS26405 () | 41255..41605 | - | 351 | WP_000127482.1 | addiction module antitoxin | - |
| C7A99_RS26410 () | 41592..41936 | - | 345 | WP_001146936.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C7A99_RS26415 () | 42290..42613 | - | 324 | WP_071702296.1 | hypothetical protein | - |
| C7A99_RS26420 () | 42797..43768 | - | 972 | WP_000082158.1 | IS110 family transposase ISSm3 | Transposase |
| C7A99_RS26425 () | 44336..44995 | + | 660 | WP_000516232.1 | peptidyl-arginine deiminase | - |
| C7A99_RS26430 () | 45085..45387 | + | 303 | WP_001096511.1 | hypothetical protein | - |
| C7A99_RS26440 () | 45974..46198 | + | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C7A99_RS26445 () | 46195..46581 | + | 387 | WP_000673985.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| C7A99_RS26455 () | 47735..48592 | - | 858 | WP_000130985.1 | incFII family plasmid replication initiator RepA | - |
| C7A99_RS26460 () | 48585..48659 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C7A99_RS26470 () | 48904..49152 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| C7A99_RS26475 () | 49392..49982 | - | 591 | WP_000766804.1 | DUF2726 domain-containing protein | - |
| C7A99_RS26480 () | 50020..50229 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| C7A99_RS26485 () | 50275..50736 | - | 462 | WP_001233837.1 | thermonuclease family protein | - |
| C7A99_RS26490 () | 50981..51172 | - | 192 | WP_071602422.1 | hypothetical protein | - |
| C7A99_RS26495 () | 51826..52503 | - | 678 | WP_000392235.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|