MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33305 bp
Accession: NZ_CP028167 Location: 1..33305 Organism: Escherichia coli strain CFSAN064036 Replicon: plasmid pGMI17-004_2
Accession: NZ_CP028167 Location: 1..33305 Organism: Escherichia coli strain CFSAN064036 Replicon: plasmid pGMI17-004_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6668_RS25060 () | 1372..2094 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| C6668_RS25070 () | 2486..3013 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| C6668_RS25075 () | 3148..3552 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| C6668_RS25080 () | 3565..4431 | - | 867 | WP_001353743.1 | replication initiation protein | - |
| C6668_RS26335 () | 5846..6361 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| C6668_RS25090 () | 6466..7008 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| C6668_RS25095 () | 7005..7256 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| C6668_RS25100 () | 7243..7470 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| C6668_RS25110 () | 7925..8224 | + | 300 | WP_000650309.1 | hypothetical protein | - |
| C6668_RS25115 () | 8315..8665 | + | 351 | WP_000854259.1 | hypothetical protein | - |
| C6668_RS25120 () | 8970..9218 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C6668_RS25125 () | 9215..9562 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C6668_RS25135 () | 9923..10426 | + | 504 | WP_000781813.1 | hypothetical protein | - |
| C6668_RS25140 () | 10430..11659 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| C6668_RS25145 () | 11736..12029 | + | 294 | WP_060598542.1 | LuxR family transcriptional regulator | - |
| C6668_RS25150 () | 12026..12241 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| C6668_RS25155 () | 12597..13216 | + | 620 | Protein_17 | Type IV secretion system protein virB1 | VF |
| C6668_RS25160 () | 13284..13556 | + | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| C6668_RS25165 () | 13575..16322 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| C6668_RS25170 () | 16334..17050 | + | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| C6668_RS25175 () | 17062..18156 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| C6668_RS25195 () | 18671..19357 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| C6668_RS25200 () | 19354..20262 | + | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| C6668_RS25205 () | 20255..21373 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| C6668_RS25210 () | 21375..22403 | + | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| C6668_RS25215 () | 22390..24252 | + | 1863 | WP_170324155.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C6668_RS25220 () | 24264..24683 | + | 420 | WP_000737411.1 | hypothetical protein | - |
| C6668_RS25225 () | 24667..24972 | + | 306 | WP_001350475.1 | putative conjugal transfer protein | - |
| C6668_RS26445 () | 25133..25279 | + | 147 | WP_000382583.1 | hypothetical protein | - |
| C6668_RS25230 () | 25283..25855 | + | 573 | WP_001198960.1 | hypothetical protein | - |
| C6668_RS25235 () | 25860..28013 | + | 2154 | WP_001235745.1 | type IA DNA topoisomerase | - |
| C6668_RS25240 () | 28010..28216 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| C6668_RS25245 () | 28234..28698 | + | 465 | WP_001293134.1 | H-NS histone family protein | - |
| C6668_RS25250 () | 28785..29489 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C6668_RS25270 () | 31030..31677 | + | 648 | WP_000587671.1 | P-loop NTPase | - |
| C6668_RS25275 () | 31752..32021 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| C6668_RS25285 () | 32182..32796 | + | 615 | Protein_37 | DUF2806 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|