MGE detailed information
MGE type: Prophage MGE length: 54459 bp
Accession: NZ_CP028163 Location: 94924..149382 Organism: Staphylococcus aureus strain CFSAN064038 Replicon: chromosome
Accession: NZ_CP028163 Location: 94924..149382 Organism: Staphylococcus aureus strain CFSAN064038 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9J77_RS00510 () | 90022..90354 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| C9J77_RS00515 () | 90388..91389 | - | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| C9J77_RS00520 () | 91503..91595 | - | 93 | WP_014936975.1 | hypothetical protein | - |
| C9J77_RS00525 () | 91691..92905 | + | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| C9J77_RS00530 () | 92963..93790 | + | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| C9J77_RS00545 () | 94924..96378 | - | 1455 | WP_021285991.1 | N-acetylmuramoyl-L-alanine amidase | - |
| C9J77_RS00550 () | 96390..96692 | - | 303 | WP_000339146.1 | phage holin | - |
| C9J77_RS00555 () | 96828..97127 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| C9J77_RS00560 () | 97173..97337 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| C9J77_RS00565 () | 97330..97719 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| C9J77_RS00570 () | 97719..99185 | - | 1467 | WP_021285990.1 | BppU family phage baseplate upper protein | - |
| C9J77_RS00575 () | 99185..101095 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| C9J77_RS00580 () | 101111..101401 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| C9J77_RS00585 () | 101401..102984 | - | 1584 | WP_000384464.1 | prophage endopeptidase tail family protein | - |
| C9J77_RS00590 () | 102993..103817 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| C9J77_RS00595 () | 103817..110017 | - | 6201 | WP_103149610.1 | phage tail tape measure protein | - |
| C9J77_RS00600 () | 110031..110189 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| C9J77_RS00605 () | 110231..110581 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| C9J77_RS00610 () | 110639..111094 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| C9J77_RS00615 () | 111186..111827 | - | 642 | WP_000807536.1 | tail protein | - |
| C9J77_RS00620 () | 111862..112257 | - | 396 | WP_015978094.1 | DUF3168 domain-containing protein | - |
| C9J77_RS00625 () | 112258..112659 | - | 402 | WP_031776127.1 | hypothetical protein | - |
| C9J77_RS00630 () | 112656..112988 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| C9J77_RS00635 () | 113000..113278 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| C9J77_RS00640 () | 113347..114510 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| C9J77_RS00645 () | 114522..115295 | - | 774 | WP_031886567.1 | Clp protease ClpP | - |
| C9J77_RS00650 () | 115279..116517 | - | 1239 | WP_031919077.1 | phage portal protein | - |
| C9J77_RS00655 () | 116522..118213 | - | 1692 | WP_000153540.1 | terminase large subunit | - |
| C9J77_RS00660 () | 118203..118508 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| C9J77_RS00665 () | 118636..118950 | - | 315 | WP_000160683.1 | HNH endonuclease | - |
| C9J77_RS00670 () | 119107..119544 | - | 438 | WP_000513703.1 | transcriptional regulator | - |
| C9J77_RS00675 () | 119557..120924 | - | 1368 | WP_074370994.1 | DEAD/DEAH box helicase | - |
| C9J77_RS00680 () | 120905..121195 | - | 291 | WP_001794602.1 | VRR-NUC domain-containing protein | - |
| C9J77_RS00685 () | 121329..121433 | + | 105 | WP_078099040.1 | hypothetical protein | - |
| C9J77_RS00690 () | 121536..123983 | - | 2448 | WP_103149611.1 | virulence-associated E family protein | - |
| C9J77_RS00700 () | 124271..124471 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| C9J77_RS00705 () | 124539..124691 | - | 153 | WP_016187444.1 | hypothetical protein | - |
| C9J77_RS00710 () | 124688..125077 | - | 390 | WP_173677596.1 | hypothetical protein | - |
| C9J77_RS00715 () | 125067..125303 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| C9J77_RS00720 () | 125328..125564 | - | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| C9J77_RS00725 () | 125601..126143 | - | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| C9J77_RS00730 () | 126148..126384 | - | 237 | WP_001065023.1 | DUF1024 family protein | - |
| C9J77_RS00735 () | 126377..126685 | - | 309 | WP_000144708.1 | hypothetical protein | - |
| C9J77_RS00740 () | 126682..127029 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| C9J77_RS00745 () | 127026..127427 | - | 402 | WP_031796932.1 | hypothetical protein | - |
| C9J77_RS00750 () | 127430..127636 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| C9J77_RS00755 () | 127650..127892 | - | 243 | WP_031775821.1 | phage protein | - |
| C9J77_RS00760 () | 127907..128107 | - | 201 | WP_000235324.1 | hypothetical protein | - |
| C9J77_RS00765 () | 128110..128367 | - | 258 | WP_000022728.1 | DUF3310 domain-containing protein | - |
| C9J77_RS00770 () | 128367..128768 | - | 402 | WP_000113974.1 | PVL family protein | - |
| C9J77_RS00775 () | 128768..128953 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| C9J77_RS00780 () | 128966..130918 | - | 1953 | WP_103149614.1 | DNA polymerase | - |
| C9J77_RS00785 () | 130987..131544 | - | 558 | WP_000645049.1 | DUF2815 family protein | - |
| C9J77_RS00790 () | 131571..132737 | - | 1167 | WP_031794996.1 | DUF2800 domain-containing protein | - |
| C9J77_RS00795 () | 132734..133096 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| C9J77_RS00800 () | 133111..133434 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| C9J77_RS00805 () | 133513..133674 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| C9J77_RS00810 () | 133687..133950 | - | 264 | WP_016187436.1 | helix-turn-helix domain-containing protein | - |
| C9J77_RS00815 () | 133975..134190 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| C9J77_RS00820 () | 134245..134610 | + | 366 | WP_016170627.1 | hypothetical protein | Antitoxin Detail |
| C9J77_RS00825 () | 134579..134824 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| C9J77_RS00830 () | 134880..135089 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| C9J77_RS00835 () | 135079..135222 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| C9J77_RS00840 () | 135251..136027 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| C9J77_RS00845 () | 136041..136277 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| C9J77_RS00850 () | 136429..136743 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C9J77_RS00855 () | 136756..137217 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| C9J77_RS00860 () | 137235..137819 | + | 585 | WP_031918390.1 | hypothetical protein | - |
| C9J77_RS00865 () | 138050..138196 | + | 147 | WP_074370993.1 | hypothetical protein | - |
| C9J77_RS00870 () | 138193..138807 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| C9J77_RS00875 () | 138933..140138 | + | 1206 | WP_031795352.1 | site-specific integrase | - |
| C9J77_RS00880 () | 140232..142166 | - | 1935 | Protein_164 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| C9J77_RS00885 () | 142583..143896 | + | 1314 | WP_001077706.1 | YjiH family protein | - |
| C9J77_RS00890 () | 144026..144694 | - | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| C9J77_RS00895 () | 144834..145634 | + | 801 | WP_000667388.1 | MurR/RpiR family transcriptional regulator | - |
| C9J77_RS00900 () | 145911..146771 | - | 861 | WP_000291432.1 | ROK family protein | - |
| C9J77_RS00905 () | 146929..147810 | + | 882 | WP_001030735.1 | N-acetylneuraminate lyase | - |
| C9J77_RS00910 () | 147850..149382 | + | 1533 | WP_000665744.1 | sodium:solute symporter | - |
| C9J77_RS00915 () | 149488..150708 | - | 1221 | WP_001022977.1 | NupC/NupG family nucleoside CNT transporter | - |
| C9J77_RS00920 () | 150719..151642 | - | 924 | WP_074370992.1 | pseudouridine-5'-phosphate glycosidase | - |
| C9J77_RS00925 () | 151617..152735 | - | 1119 | WP_001283977.1 | winged helix-turn-helix transcriptional regulator | - |
| C9J77_RS00930 () | 153078..154109 | - | 1032 | WP_000364856.1 | PTS sugar transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|