MGE detailed information
MGE type: Prophage MGE length: 70974 bp
Accession: NZ_CP028126 Location: 2535694..2606667 Organism: Escherichia coli O26 str. RM10386 Replicon: chromosome
Accession: NZ_CP028126 Location: 2535694..2606667 Organism: Escherichia coli O26 str. RM10386 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3U_RS15395 () | 2531550..2532350 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| I3U_RS15400 () | 2532363..2533214 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| I3U_RS15405 () | 2533269..2533727 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| I3U_RS15415 () | 2534156..2534722 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| I3U_RS15420 () | 2534719..2535528 | - | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| I3U_RS15425 () | 2535694..2535903 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| I3U_RS15430 () | 2535916..2536059 | - | 144 | WP_001295496.1 | YobF family protein | - |
| I3U_RS15440 () | 2536728..2537015 | - | 288 | WP_001006866.1 | YebO family protein | - |
| I3U_RS15445 () | 2537090..2537233 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| I3U_RS15450 () | 2537392..2537631 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| I3U_RS15455 () | 2537774..2538565 | - | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| I3U_RS15460 () | 2538742..2540115 | + | 1374 | WP_001127210.1 | MFS transporter | - |
| I3U_RS15465 () | 2540161..2541042 | - | 882 | WP_000984517.1 | protease HtpX | - |
| I3U_RS15470 () | 2541234..2543282 | - | 2049 | WP_001431407.1 | carboxy terminal-processing peptidase | - |
| I3U_RS15475 () | 2543302..2544000 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| I3U_RS15480 () | 2544097..2544594 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| I3U_RS15485 () | 2544724..2546007 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| I3U_RS15490 () | 2545976..2548609 | + | 2634 | WP_001299674.1 | hypothetical protein | VF |
| I3U_RS15495 () | 2548689..2550128 | + | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| I3U_RS15500 () | 2550246..2550482 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| I3U_RS15505 () | 2550587..2550778 | + | 192 | WP_001296140.1 | YebW family protein | - |
| I3U_RS15510 () | 2550779..2551435 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| I3U_RS15515 () | 2552120..2552386 | + | 267 | Protein_2634 | hypothetical protein | - |
| I3U_RS32985 () | 2552390..2553040 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| I3U_RS15530 () | 2553265..2554140 | - | 876 | WP_000491545.1 | hypothetical protein | VF |
| I3U_RS15535 () | 2554281..2554550 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3U_RS15540 () | 2554552..2555865 | - | 1314 | WP_000268926.1 | ISNCY family transposase KIS | Transposase |
| I3U_RS15545 () | 2555930..2556529 | - | 600 | WP_001230428.1 | Outer membrane protein X | VF |
| I3U_RS15550 () | 2556585..2558123 | - | 1539 | WP_000099148.1 | IS66 family transposase ISEc22 | Transposase |
| I3U_RS15555 () | 2558172..2558519 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| I3U_RS15560 () | 2558516..2558920 | - | 405 | WP_000839165.1 | IS66 family transposase ISEc22 | Transposase |
| I3U_RS15565 () | 2559059..2562454 | - | 3396 | WP_064551593.1 | host specificity protein J | - |
| I3U_RS15570 () | 2562797..2563429 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| I3U_RS15575 () | 2563375..2564118 | - | 744 | WP_053892383.1 | C40 family peptidase | - |
| I3U_RS15580 () | 2564129..2564827 | - | 699 | WP_032363306.1 | phage minor tail protein L | - |
| I3U_RS15585 () | 2564827..2565156 | - | 330 | WP_000847298.1 | phage tail protein | - |
| I3U_RS15590 () | 2565153..2567765 | - | 2613 | WP_000081762.1 | phage tail tape measure protein | - |
| I3U_RS15595 () | 2567746..2568159 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| I3U_RS15600 () | 2568186..2568608 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| I3U_RS15605 () | 2568622..2569374 | - | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| I3U_RS15610 () | 2569382..2569777 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| I3U_RS15615 () | 2569774..2570352 | - | 579 | WP_000975096.1 | phage tail protein | - |
| I3U_RS15620 () | 2570364..2570717 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| I3U_RS15625 () | 2570729..2571124 | - | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| I3U_RS15630 () | 2571166..2572191 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| I3U_RS15635 () | 2572247..2572579 | - | 333 | WP_001365129.1 | head decoration protein | - |
| I3U_RS15640 () | 2572589..2573908 | - | 1320 | WP_000123251.1 | S49 family peptidase | - |
| I3U_RS15645 () | 2573889..2575489 | - | 1601 | Protein_2659 | phage portal protein | - |
| I3U_RS15650 () | 2575486..2575692 | - | 207 | WP_000198153.1 | gpW family protein | - |
| I3U_RS15655 () | 2575689..2577614 | - | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| I3U_RS15660 () | 2577589..2578134 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I3U_RS15670 () | 2578523..2578717 | + | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| I3U_RS15680 () | 2578905..2579522 | - | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| I3U_RS15685 () | 2579672..2580109 | - | 438 | WP_000092325.1 | lysis protein | - |
| I3U_RS15690 () | 2580106..2580603 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| I3U_RS15695 () | 2580603..2580817 | - | 215 | Protein_2667 | holin | - |
| I3U_RS15705 () | 2581255..2583105 | - | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| I3U_RS15710 () | 2583427..2583679 | - | 253 | Protein_2669 | DUF3927 family protein | - |
| I3U_RS15715 () | 2583676..2584038 | - | 363 | Protein_2670 | tellurite resistance TerB family protein | - |
| I3U_RS15720 () | 2584275..2585096 | - | 822 | WP_000762928.1 | antitermination protein | - |
| I3U_RS15725 () | 2585093..2585467 | - | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3U_RS15730 () | 2585480..2586529 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| I3U_RS15735 () | 2586531..2586803 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| I3U_RS15740 () | 2586925..2587269 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| I3U_RS15745 () | 2587389..2587544 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| I3U_RS15750 () | 2587835..2588392 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| I3U_RS15755 () | 2588394..2588612 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| I3U_RS15760 () | 2588740..2589051 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| I3U_RS15765 () | 2589044..2589271 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| I3U_RS15770 () | 2589268..2589549 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| I3U_RS15775 () | 2589582..2590343 | - | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| I3U_RS15780 () | 2590369..2591110 | - | 742 | Protein_2683 | ATP-binding protein | - |
| I3U_RS15785 () | 2591117..2592079 | - | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| I3U_RS15790 () | 2592102..2592527 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| I3U_RS15795 () | 2592524..2592826 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| I3U_RS15800 () | 2592924..2593295 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| I3U_RS15805 () | 2593316..2593507 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| I3U_RS15810 () | 2593509..2593787 | + | 279 | WP_001448501.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I3U_RS15815 () | 2594074..2594226 | + | 153 | WP_001427316.1 | DUF1391 family protein | - |
| I3U_RS15820 () | 2594647..2594868 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| I3U_RS15825 () | 2594862..2595038 | + | 177 | WP_000245534.1 | hypothetical protein | - |
| I3U_RS15830 () | 2595112..2595387 | + | 276 | WP_001307773.1 | hypothetical protein | - |
| I3U_RS15835 () | 2595486..2598137 | + | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| I3U_RS15840 () | 2598130..2598939 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| I3U_RS15845 () | 2598996..2599190 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| I3U_RS15850 () | 2599183..2599371 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2599189..2599367 | - | 179 | NuclAT_1 | - | - |
| - () | 2599189..2599367 | - | 179 | NuclAT_1 | - | - |
| - () | 2599189..2599367 | - | 179 | NuclAT_1 | - | - |
| - () | 2599189..2599367 | - | 179 | NuclAT_1 | - | - |
| I3U_RS15855 () | 2599478..2599759 | + | 282 | WP_001443927.1 | excisionase | - |
| I3U_RS15860 () | 2599725..2600840 | + | 1116 | WP_001189092.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2600931..2601165 | + | 235 | - | - | Antitoxin Detail |
| - () | 2600932..2601035 | - | 104 | - | - | Toxin Detail |
| I3U_RS15865 () | 2601193..2601534 | - | 342 | WP_000976492.1 | YebY family protein | - |
| I3U_RS15870 () | 2601547..2602419 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| I3U_RS15875 () | 2602423..2602797 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| I3U_RS15880 () | 2602936..2603166 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| I3U_RS15885 () | 2603268..2603924 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| I3U_RS15890 () | 2603948..2604610 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| I3U_RS15895 () | 2604607..2606667 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| I3U_RS15900 () | 2606876..2607535 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| I3U_RS15905 () | 2607862..2608218 | - | 357 | WP_001295500.1 | protein YebF | - |
| I3U_RS15910 () | 2608285..2608575 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| I3U_RS15915 () | 2608709..2609887 | + | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| I3U_RS15920 () | 2609943..2610584 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|