MGE detailed information
MGE type: Mobilizable plasmid MGE length: 109466 bp
Accession: NZ_CP028121 Location: 1..109466 Organism: Escherichia coli O43 str. RM10042 Replicon: plasmid pRM10042-2
Accession: NZ_CP028121 Location: 1..109466 Organism: Escherichia coli O43 str. RM10042 Replicon: plasmid pRM10042-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3W_RS00585 () | 1034..1330 | - | 297 | WP_106889145.1 | flagellar biosynthesis protein FlgM | - |
| I3W_RS00590 () | 1358..1549 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| I3W_RS00595 () | 1559..1924 | - | 366 | WP_000997723.1 | hypothetical protein | - |
| I3W_RS00605 () | 2431..6524 | - | 4094 | Protein_4 | Serine protease EspP | VF |
| I3W_RS00615 () | 7190..8131 | - | 942 | Protein_5 | IS3 family transposase IS3F | Transposase |
| I3W_RS00620 () | 8541..9923 | + | 1383 | WP_108942198.1 | Adhesin YadA | VF |
| I3W_RS27855 () | 10175..10464 | + | 290 | Protein_7 | IS3 family transposase IS3F | Transposase |
| I3W_RS00630 () | 10668..10835 | + | 168 | Protein_8 | integrase core domain-containing protein | - |
| I3W_RS00640 () | 11154..13241 | + | 2088 | WP_050877130.1 | bifunctional siderophore receptor/adhesin Iha | - |
| I3W_RS00645 () | 13502..13924 | - | 423 | WP_047087018.1 | Exc2 family lipoprotein | - |
| I3W_RS00650 () | 14109..15623 | - | 1515 | WP_108942200.1 | IS66 family transposase ISEc8 | Transposase |
| I3W_RS00655 () | 15673..16020 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| I3W_RS00660 () | 16017..16397 | - | 381 | WP_001171532.1 | IS66 family transposase ISEc8 | Transposase |
| I3W_RS00670 () | 16891..17007 | - | 117 | WP_072130407.1 | Hok/Gef family protein | - |
| I3W_RS00675 () | 17363..17605 | + | 243 | WP_001398505.1 | hypothetical protein | - |
| I3W_RS00680 () | 17698..19166 | - | 1469 | Protein_16 | phosphoethanolamine transferase | - |
| I3W_RS00695 () | 19990..21167 | - | 1178 | Protein_17 | IS3 family transposase | - |
| I3W_RS00700 () | 21224..21787 | - | 564 | WP_001158017.1 | hypothetical protein | - |
| I3W_RS00705 () | 21946..22398 | + | 453 | WP_108942202.1 | thermonuclease family protein | - |
| I3W_RS00710 () | 22841..26739 | + | 3899 | Protein_20 | Serine protease EspP | VF |
| I3W_RS00720 () | 27246..27611 | + | 366 | WP_000997723.1 | hypothetical protein | - |
| I3W_RS00725 () | 27621..27812 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| I3W_RS00730 () | 27840..28151 | + | 312 | WP_108942204.1 | flagellar biosynthesis protein FlgM | - |
| I3W_RS00735 () | 28403..28732 | + | 330 | WP_001442266.1 | IS3 family transposase ISKpn8 | Transposase |
| I3W_RS00745 () | 29086..29784 | - | 699 | WP_000431491.1 | lactate utilization protein C | - |
| I3W_RS00750 () | 29789..31204 | - | 1416 | WP_000054157.1 | iron-sulfur cluster-binding protein | - |
| I3W_RS00755 () | 31215..31934 | - | 720 | WP_001102132.1 | (Fe-S)-binding protein | - |
| I3W_RS00760 () | 31984..33540 | - | 1557 | WP_000554413.1 | L-lactate permease | - |
| I3W_RS00765 () | 34070..35276 | + | 1207 | Protein_29 | IS3 family transposase | - |
| I3W_RS00770 () | 35553..35953 | + | 401 | Protein_30 | hypothetical protein | - |
| I3W_RS00775 () | 36053..36160 | - | 108 | Protein_31 | helix-turn-helix domain-containing protein | - |
| I3W_RS00780 () | 36252..36926 | + | 675 | WP_001442267.1 | IS66 family transposase ISSfl3 | Transposase |
| I3W_RS00785 () | 36923..37270 | + | 348 | WP_000631723.1 | IS66 family transposase ISSfl3 | Transposase |
| I3W_RS00790 () | 37290..38846 | + | 1557 | WP_001066416.1 | IS66 family transposase ISSfl3 | Transposase |
| I3W_RS00795 () | 38879..40120 | + | 1242 | Protein_35 | Tn3 family transposase ISEc63 | Transposase |
| I3W_RS27570 () | 40388..40465 | - | 78 | Protein_36 | colicin V | - |
| I3W_RS27575 () | 40443..40679 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| I3W_RS00810 () | 41020..41602 | - | 583 | Protein_38 | adhesin | - |
| I3W_RS00815 () | 41688..42170 | - | 483 | WP_108942218.1 | DUF2569 domain-containing protein | - |
| I3W_RS00820 () | 42261..42518 | - | 258 | WP_000812110.1 | hypothetical protein | - |
| I3W_RS00825 () | 42515..43261 | - | 747 | WP_029237364.1 | hypothetical protein | - |
| I3W_RS00830 () | 43554..43736 | - | 183 | WP_000205441.1 | hypothetical protein | - |
| I3W_RS00835 () | 43746..44048 | - | 303 | WP_001370014.1 | hypothetical protein | - |
| I3W_RS00840 () | 44035..53522 | - | 9488 | Protein_44 | tRNA nuclease CdiA | VF |
| I3W_RS00845 () | 53535..55300 | - | 1766 | Protein_45 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| I3W_RS00855 () | 55913..56152 | - | 240 | WP_071988618.1 | MarR family transcriptional regulator | - |
| I3W_RS00860 () | 56165..56381 | - | 217 | Protein_47 | hypothetical protein | - |
| I3W_RS00875 () | 57128..57985 | - | 858 | WP_047087087.1 | incFII family plasmid replication initiator RepA | - |
| I3W_RS00880 () | 57978..58052 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I3W_RS00885 () | 58277..58537 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| I3W_RS00890 () | 58821..58970 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 59018..59074 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59018..59074 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59018..59074 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59018..59074 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| I3W_RS00905 () | 59773..60234 | - | 462 | WP_108942208.1 | thermonuclease family protein | - |
| I3W_RS00910 () | 61019..62533 | - | 1515 | WP_108942200.1 | IS66 family transposase ISEc8 | Transposase |
| I3W_RS00915 () | 62583..62930 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| I3W_RS00920 () | 62927..63307 | - | 381 | WP_001171532.1 | IS66 family transposase ISEc8 | Transposase |
| I3W_RS00925 () | 63667..63816 | + | 150 | WP_024199253.1 | hypothetical protein | - |
| I3W_RS00930 () | 63914..64345 | - | 432 | WP_073614123.1 | tolA family protein | - |
| I3W_RS00935 () | 64413..67123 | - | 2711 | Protein_58 | Protein TraI | Relaxase |
| I3W_RS00940 () | 67135..67467 | - | 333 | WP_001291058.1 | hypothetical protein | - |
| I3W_RS00945 () | 67700..68035 | + | 336 | WP_000157089.1 | hypothetical protein | - |
| I3W_RS00950 () | 68120..68968 | - | 849 | WP_108942210.1 | DUF4942 domain-containing protein | - |
| I3W_RS00960 () | 69386..69739 | - | 354 | WP_077630265.1 | hypothetical protein | - |
| I3W_RS00965 () | 69702..69893 | - | 192 | WP_001027514.1 | hypothetical protein | - |
| I3W_RS00970 () | 69893..70312 | - | 420 | WP_000271765.1 | DUF1380 family protein | - |
| I3W_RS00975 () | 70359..70661 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| I3W_RS00985 () | 71197..71962 | - | 766 | Protein_66 | hypothetical protein | - |
| I3W_RS00990 () | 72007..72441 | - | 435 | WP_000274419.1 | DUF1380 family protein | - |
| I3W_RS00995 () | 72455..72676 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| I3W_RS01000 () | 72677..73360 | - | 684 | WP_000086114.1 | DNA methylase | - |
| I3W_RS01005 () | 73437..73749 | - | 313 | Protein_70 | hypothetical protein | - |
| I3W_RS01010 () | 73746..74648 | - | 903 | WP_077630271.1 | DUF1281 domain-containing protein | - |
| I3W_RS01020 () | 75067..75315 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| I3W_RS01025 () | 75312..75749 | + | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| I3W_RS01030 () | 75749..77019 | + | 1271 | Protein_74 | translesion error-prone DNA polymerase V subunit UmuC | - |
| I3W_RS01040 () | 77024..77416 | - | 393 | WP_000340836.1 | plasmid partitioning/stability family protein | - |
| I3W_RS01045 () | 77421..78392 | - | 972 | WP_001103695.1 | hypothetical protein | - |
| I3W_RS01050 () | 78621..79265 | + | 645 | WP_000633912.1 | AAA family ATPase | - |
| I3W_RS01055 () | 79259..79534 | + | 276 | WP_000239527.1 | hypothetical protein | - |
| I3W_RS01060 () | 79672..80481 | - | 810 | WP_000016958.1 | site-specific integrase | - |
| I3W_RS01065 () | 80482..80787 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| I3W_RS01070 () | 80789..81007 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| I3W_RS01075 () | 81566..81826 | + | 261 | WP_000434493.1 | hypothetical protein | - |
| I3W_RS01080 () | 81823..82413 | + | 591 | WP_000194552.1 | hypothetical protein | - |
| I3W_RS01085 () | 82431..82778 | - | 348 | WP_000142428.1 | hypothetical protein | - |
| I3W_RS01095 () | 83259..83630 | - | 372 | WP_001373114.1 | colicin | - |
| I3W_RS01100 () | 83690..84421 | - | 732 | WP_000850415.1 | complement resistance protein TraT | - |
| I3W_RS01110 () | 84693..84803 | - | 111 | Protein_87 | IS481 family transposase ISSod13 | Transposase |
| I3W_RS27860 () | 84807..85028 | - | 222 | Protein_88 | hypothetical protein | - |
| I3W_RS01125 () | 85594..86571 | + | 978 | WP_011310114.1 | RepB family plasmid replication initiator protein | - |
| I3W_RS01130 () | 86856..87565 | - | 710 | Protein_90 | tyrosine-type recombinase/integrase | - |
| I3W_RS01135 () | 87629..88855 | - | 1227 | Protein_91 | ISL3 family transposase | - |
| I3W_RS01140 () | 89012..89237 | - | 226 | Protein_92 | serine/threonine protein kinase | - |
| I3W_RS01150 () | 89368..89862 | - | 495 | WP_062896476.1 | Transcriptional repressor MprA | VF |
| I3W_RS01155 () | 89983..91422 | - | 1440 | WP_001213536.1 | Hemolysin secretion protein D, chromosomal | VF |
| I3W_RS01160 () | 91426..93545 | - | 2120 | Protein_95 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| I3W_RS01165 () | 93595..96591 | - | 2997 | WP_108942212.1 | Hemolysin, chromosomal | VF |
| I3W_RS01170 () | 96593..97108 | - | 516 | WP_000839942.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| I3W_RS01175 () | 97535..98337 | - | 803 | Protein_98 | Outer membrane protein A | VF |
| I3W_RS01180 () | 98362..102696 | - | 4335 | WP_108942214.1 | Autotransporter adhesin SadA | VF |
| I3W_RS01185 () | 102709..102999 | - | 291 | WP_000070403.1 | Major pilu subunit operon regulatory protein PapB | VF |
| I3W_RS27865 () | 103716..103869 | + | 154 | Protein_101 | IS91 family transposase | - |
| I3W_RS01210 () | 105293..106479 | + | 1187 | Protein_102 | IS110 family transposase | - |
| I3W_RS01215 () | 106525..106668 | + | 144 | WP_077630270.1 | hypothetical protein | - |
| I3W_RS01220 () | 106672..108264 | - | 1593 | WP_040118371.1 | IS66 family transposase ISEc47 | Transposase |
| I3W_RS01225 () | 108295..108645 | - | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| I3W_RS01230 () | 108642..109061 | - | 420 | WP_000422680.1 | IS66 family transposase ISEc23 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|