MGE detailed information
MGE type: Prophage MGE length: 60691 bp
Accession: NZ_CP028116 Location: 2531964..2592654 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Accession: NZ_CP028116 Location: 2531964..2592654 Organism: Escherichia coli O26 str. RM8426 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3M_RS14800 () | 2527222..2529270 | - | 2049 | WP_001431407.1 | carboxy terminal-processing peptidase | - |
| I3M_RS14805 () | 2529290..2529988 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| I3M_RS14810 () | 2530085..2530582 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| I3M_RS14815 () | 2530712..2531995 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| I3M_RS14820 () | 2531964..2534597 | + | 2634 | WP_001299674.1 | hypothetical protein | VF |
| I3M_RS14825 () | 2534677..2536116 | + | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| I3M_RS14830 () | 2536234..2536470 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| I3M_RS14835 () | 2536575..2536766 | + | 192 | WP_001296140.1 | YebW family protein | - |
| I3M_RS14840 () | 2536767..2537423 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| I3M_RS14845 () | 2538108..2538374 | + | 267 | Protein_2613 | hypothetical protein | - |
| I3M_RS31515 () | 2538378..2539028 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| I3M_RS14860 () | 2539253..2540128 | - | 876 | WP_000491545.1 | hypothetical protein | VF |
| I3M_RS14865 () | 2540269..2540538 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3M_RS14870 () | 2540540..2541853 | - | 1314 | WP_000268926.1 | ISNCY family transposase KIS | Transposase |
| I3M_RS14875 () | 2541918..2542516 | - | 599 | Protein_2618 | Ail/Lom family outer membrane beta-barrel protein | - |
| I3M_RS14880 () | 2542572..2544110 | - | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| I3M_RS14885 () | 2544159..2544506 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| I3M_RS14890 () | 2544503..2544907 | - | 405 | WP_000839165.1 | IS66 family transposase ISEc22 | Transposase |
| I3M_RS14895 () | 2545046..2548441 | - | 3396 | WP_000514713.1 | host specificity protein J | - |
| I3M_RS14900 () | 2548784..2549416 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| I3M_RS14905 () | 2549362..2550105 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| I3M_RS14910 () | 2550116..2550814 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| I3M_RS14915 () | 2550814..2551143 | - | 330 | WP_000847298.1 | phage tail protein | - |
| I3M_RS14920 () | 2551140..2553752 | - | 2613 | WP_000081762.1 | phage tail tape measure protein | - |
| I3M_RS14925 () | 2553733..2554146 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| I3M_RS14930 () | 2554173..2554595 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| I3M_RS14935 () | 2554609..2555361 | - | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| I3M_RS14940 () | 2555369..2555764 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| I3M_RS14945 () | 2555761..2556339 | - | 579 | WP_000975096.1 | phage tail protein | - |
| I3M_RS14950 () | 2556351..2556704 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| I3M_RS14955 () | 2556716..2557111 | - | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| I3M_RS14960 () | 2557153..2558178 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| I3M_RS14965 () | 2558234..2558566 | - | 333 | WP_001365129.1 | head decoration protein | - |
| I3M_RS14970 () | 2558576..2559895 | - | 1320 | WP_000123251.1 | S49 family peptidase | - |
| I3M_RS14975 () | 2559876..2561477 | - | 1602 | WP_001443752.1 | phage portal protein | - |
| I3M_RS14980 () | 2561474..2561680 | - | 207 | WP_000198153.1 | gpW family protein | - |
| I3M_RS14985 () | 2561677..2563602 | - | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| I3M_RS14990 () | 2563577..2564122 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I3M_RS15000 () | 2564511..2564705 | + | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| I3M_RS15010 () | 2564893..2565510 | - | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| I3M_RS15015 () | 2565660..2566097 | - | 438 | WP_000092325.1 | lysis protein | - |
| I3M_RS15020 () | 2566094..2566591 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| I3M_RS15025 () | 2566591..2566806 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| I3M_RS15035 () | 2567245..2569095 | - | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| I3M_RS15040 () | 2569417..2569669 | - | 253 | Protein_2648 | DUF3927 family protein | - |
| I3M_RS15045 () | 2569666..2570028 | - | 363 | Protein_2649 | tellurite resistance TerB family protein | - |
| I3M_RS15050 () | 2570266..2571087 | - | 822 | WP_000762928.1 | antitermination protein | - |
| I3M_RS15055 () | 2571084..2571458 | - | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3M_RS15060 () | 2571471..2572520 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| I3M_RS15065 () | 2572522..2572794 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| I3M_RS15070 () | 2572916..2573260 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| I3M_RS15075 () | 2573380..2573535 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| I3M_RS15080 () | 2573826..2574383 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| I3M_RS15085 () | 2574385..2574603 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| I3M_RS15090 () | 2574731..2575042 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| I3M_RS15095 () | 2575035..2575262 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| I3M_RS15100 () | 2575259..2575540 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| I3M_RS15105 () | 2575573..2576333 | - | 761 | Protein_2661 | DUF1627 domain-containing protein | - |
| I3M_RS15110 () | 2576359..2577100 | - | 742 | Protein_2662 | ATP-binding protein | - |
| I3M_RS15115 () | 2577107..2578069 | - | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| I3M_RS15120 () | 2578092..2578517 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| I3M_RS15125 () | 2578514..2578816 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| I3M_RS15130 () | 2578914..2579285 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| I3M_RS15135 () | 2579306..2579497 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| I3M_RS15140 () | 2579499..2579777 | + | 279 | WP_001448501.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I3M_RS15145 () | 2580064..2580216 | + | 153 | WP_001427316.1 | DUF1391 family protein | - |
| I3M_RS15150 () | 2580637..2580858 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| I3M_RS15155 () | 2580852..2581028 | + | 177 | WP_000245534.1 | hypothetical protein | - |
| I3M_RS15160 () | 2581102..2581377 | + | 276 | WP_001307773.1 | hypothetical protein | - |
| I3M_RS15165 () | 2581476..2584127 | + | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| I3M_RS15170 () | 2584120..2584929 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| I3M_RS15175 () | 2584986..2585180 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| I3M_RS15180 () | 2585173..2585361 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2585179..2585357 | - | 179 | NuclAT_1 | - | - |
| - () | 2585179..2585357 | - | 179 | NuclAT_1 | - | - |
| - () | 2585179..2585357 | - | 179 | NuclAT_1 | - | - |
| - () | 2585179..2585357 | - | 179 | NuclAT_1 | - | - |
| I3M_RS15185 () | 2585468..2585749 | + | 282 | WP_001443927.1 | excisionase | - |
| I3M_RS15190 () | 2585715..2586830 | + | 1116 | WP_001189089.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2586921..2587155 | + | 235 | - | - | Antitoxin Detail |
| - () | 2586922..2587025 | - | 104 | - | - | Toxin Detail |
| I3M_RS15195 () | 2587183..2587524 | - | 342 | WP_000976492.1 | YebY family protein | - |
| I3M_RS15200 () | 2587537..2588406 | - | 870 | WP_032341845.1 | copper homeostasis membrane protein CopD | - |
| I3M_RS15205 () | 2588410..2588784 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| I3M_RS15210 () | 2588923..2589153 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| I3M_RS15215 () | 2589255..2589911 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| I3M_RS15220 () | 2589935..2590597 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| I3M_RS15225 () | 2590594..2592654 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| I3M_RS15230 () | 2592863..2593522 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| I3M_RS15235 () | 2593849..2594205 | - | 357 | WP_001295500.1 | protein YebF | - |
| I3M_RS15240 () | 2594272..2594562 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| I3M_RS15245 () | 2594696..2595874 | + | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| I3M_RS15250 () | 2595930..2596571 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|