MGE detailed information
MGE type: Prophage MGE length: 49201 bp
Accession: NZ_CP027555 Location: 325868..375068 Organism: Escherichia coli strain 2013C-3513 Replicon: chromosome
Accession: NZ_CP027555 Location: 325868..375068 Organism: Escherichia coli strain 2013C-3513 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6991_RS32280 () | 321857..321904 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C6991_RS02515 () | 321918..322901 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C6991_RS02525 () | 323379..324752 | + | 1374 | WP_032323876.1 | ATP-dependent RNA helicase DbpA | - |
| C6991_RS02530 () | 324881..325816 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C6991_RS02535 () | 325868..327103 | - | 1236 | WP_000040839.1 | Aldehyde dehydrogenase, thermostable ; Integrase | Integrase |
| C6991_RS02540 () | 327105..327320 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C6991_RS02545 () | 327420..327608 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 327424..327602 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 327424..327602 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 327424..327602 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 327424..327602 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C6991_RS02550 () | 327646..327795 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C6991_RS02555 () | 327851..328660 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| C6991_RS02560 () | 328653..331253 | - | 2601 | WP_000105153.1 | exodeoxyribonuclease VIII | - |
| C6991_RS02565 () | 331355..331630 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| C6991_RS02570 () | 331705..331875 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| C6991_RS02575 () | 331875..332096 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| C6991_RS02585 () | 332538..333026 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| C6991_RS02590 () | 333023..333178 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| C6991_RS02595 () | 333189..333368 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| C6991_RS02605 () | 333611..334030 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| C6991_RS02610 () | 334110..334364 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| C6991_RS02615 () | 334361..334783 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| C6991_RS02620 () | 334861..335649 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| C6991_RS02625 () | 335656..336402 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| C6991_RS02630 () | 336425..337186 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| C6991_RS02635 () | 337202..337624 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| C6991_RS02640 () | 337730..337942 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| C6991_RS02645 () | 337975..338192 | + | 218 | Protein_388 | DUF4014 family protein | - |
| C6991_RS02650 () | 338194..338457 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| C6991_RS02655 () | 338468..338629 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| C6991_RS02660 () | 338708..338953 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| C6991_RS02665 () | 339385..340535 | + | 1151 | Protein_392 | DNA cytosine methyltransferase | - |
| C6991_RS02670 () | 340503..341492 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| C6991_RS02675 () | 341492..342883 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| C6991_RS02680 () | 343383..343982 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| C6991_RS02685 () | 343982..344272 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| C6991_RS02690 () | 344269..344823 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| C6991_RS02705 () | 345385..345816 | + | 432 | WP_032324351.1 | tellurite resistance TerB family protein | - |
| C6991_RS02710 () | 345813..346068 | + | 256 | Protein_399 | DUF3927 family protein | - |
| C6991_RS02715 () | 346391..348244 | + | 1854 | WP_000143077.1 | SASA family carbohydrate esterase | - |
| C6991_RS02720 () | 348394..348609 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| C6991_RS02725 () | 348614..348958 | + | 345 | WP_032325202.1 | YdfR family protein | - |
| C6991_RS02730 () | 349009..349542 | + | 534 | WP_000992086.1 | lysozyme | - |
| C6991_RS02735 () | 349816..350511 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| C6991_RS31565 () | 350606..350737 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| C6991_RS31575 () | 350960..351145 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| C6991_RS02755 () | 351546..351872 | + | 327 | WP_000828070.1 | TonB family protein | - |
| C6991_RS02760 () | 352004..352204 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| C6991_RS02765 () | 352246..352611 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| C6991_RS02775 () | 352900..353463 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| C6991_RS02780 () | 353460..353765 | + | 306 | WP_106881384.1 | terminase | - |
| C6991_RS02785 () | 353762..355120 | + | 1359 | WP_106881386.1 | terminase large subunit | - |
| C6991_RS02790 () | 355184..357121 | + | 1938 | WP_044165196.1 | phage major capsid protein | - |
| C6991_RS02795 () | 357166..357387 | + | 222 | WP_001063096.1 | hypothetical protein | - |
| C6991_RS02800 () | 357333..359916 | + | 2584 | Protein_415 | phage portal protein | - |
| C6991_RS02805 () | 359913..360239 | + | 327 | WP_032325002.1 | head-tail connector protein | - |
| C6991_RS02810 () | 360250..360600 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| C6991_RS02815 () | 360597..361043 | + | 447 | WP_106881388.1 | HK97 gp10 family phage protein | - |
| C6991_RS02820 () | 361040..361384 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6991_RS02825 () | 361450..362166 | + | 717 | WP_032325206.1 | tail protein | - |
| C6991_RS02830 () | 362172..362546 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C6991_RS02835 () | 362663..362850 | + | 188 | Protein_422 | DUF4035 domain-containing protein | - |
| C6991_RS02840 () | 362898..366140 | + | 3243 | WP_032325323.1 | phage tail tape measure protein | - |
| C6991_RS02845 () | 366133..366474 | + | 342 | WP_000807927.1 | phage tail protein | - |
| C6991_RS02850 () | 366474..367172 | + | 699 | WP_032325187.1 | phage minor tail protein L | - |
| C6991_RS02855 () | 367178..367921 | + | 744 | WP_069358375.1 | C40 family peptidase | - |
| C6991_RS02860 () | 367867..368499 | + | 633 | WP_162782329.1 | tail assembly protein | - |
| C6991_RS02870 () | 368690..369217 | - | 528 | WP_000649829.1 | hypothetical protein | VF |
| C6991_RS02875 () | 369351..372848 | + | 3498 | WP_000515042.1 | host specificity protein J | - |
| C6991_RS02880 () | 372919..373518 | + | 600 | WP_001230550.1 | hypothetical protein | VF |
| C6991_RS02885 () | 373583..374797 | + | 1215 | WP_106881392.1 | ISNCY family transposase KIS | Transposase |
| C6991_RS02890 () | 374799..375068 | + | 270 | WP_001023992.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6991_RS02895 () | 375181..375756 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| C6991_RS02900 () | 375829..376458 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| C6991_RS02905 () | 376540..377181 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| C6991_RS02910 () | 377762..378196 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| C6991_RS02915 () | 378337..379470 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA10219 | NC_002695 | 1921609..1970151 | 0.01 |