MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94116 bp
Accession: NZ_CP027549 Location: 1..94116 Organism: Escherichia coli strain 2014C-3061 Replicon: plasmid unnamed
Accession: NZ_CP027549 Location: 1..94116 Organism: Escherichia coli strain 2014C-3061 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6992_RS28400 () | 423..791 | + | 369 | Protein_1 | DUF4113 domain-containing protein | - |
| C6992_RS28405 () | 931..1893 | - | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| C6992_RS28410 () | 1890..3095 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| C6992_RS29585 () | 3469..3639 | + | 171 | WP_000402943.1 | hypothetical protein | - |
| C6992_RS28425 () | 3813..4064 | + | 252 | WP_001132893.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C6992_RS28430 () | 4061..4348 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6992_RS29590 () | 4350..4472 | + | 123 | Protein_7 | IS3 family transposase | - |
| C6992_RS28435 () | 4558..4923 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6992_RS28440 () | 4923..6119 | + | 1197 | WP_033815853.1 | IS91 family transposase ISEc37 | Transposase |
| C6992_RS28445 () | 6308..6460 | - | 153 | Protein_10 | IS3 family transposase IS1203 | Transposase |
| C6992_RS28455 () | 7934..8755 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C6992_RS28460 () | 8755..9861 | + | 1107 | WP_106904419.1 | glycosyltransferase family 4 protein | - |
| C6992_RS28465 () | 9955..11676 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C6992_RS28470 () | 11750..12748 | + | 999 | WP_077629919.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C6992_RS28475 () | 12801..12989 | + | 189 | Protein_15 | hypothetical protein | - |
| C6992_RS28480 () | 13052..14590 | - | 1539 | WP_062904993.1 | IS66 family transposase ISEc8 | Transposase |
| C6992_RS28485 () | 14640..14987 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C6992_RS28490 () | 14984..15373 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| C6992_RS28495 () | 15525..15737 | + | 213 | WP_032257629.1 | ANR family transcriptional regulator | - |
| C6992_RS28500 () | 15983..16377 | + | 395 | Protein_20 | thermonuclease family protein | - |
| C6992_RS28505 () | 16740..16883 | - | 144 | Protein_21 | IS3 family transposase | - |
| C6992_RS28510 () | 16886..17029 | - | 144 | Protein_22 | IS3 family transposase IS911 | Transposase |
| C6992_RS28515 () | 17106..17779 | + | 674 | Protein_23 | DDE-type integrase/transposase/recombinase | - |
| C6992_RS28520 () | 18218..20878 | + | 2661 | WP_000770130.1 | Metalloprotease StcE | VF |
| C6992_RS28525 () | 20962..21837 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| C6992_RS28530 () | 21838..23808 | + | 1971 | WP_013009342.1 | Type II secretion system protein D | VF |
| C6992_RS28535 () | 23805..25307 | + | 1503 | WP_001418198.1 | Type II secretion system protein E | VF |
| C6992_RS28540 () | 25309..26532 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| C6992_RS28545 () | 26563..26997 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| C6992_RS28550 () | 26994..27545 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| C6992_RS28555 () | 27560..27907 | + | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| C6992_RS28560 () | 27904..28503 | + | 600 | WP_106904420.1 | Type II secretion system protein J | VF |
| C6992_RS28565 () | 28500..29476 | + | 977 | Protein_33 | Putative type II secretion system protein K | VF |
| C6992_RS28570 () | 29515..30687 | + | 1173 | WP_071526091.1 | Type II secretion system protein L | VF |
| C6992_RS28575 () | 30674..31189 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| C6992_RS28580 () | 31241..32074 | + | 834 | WP_000088802.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C6992_RS28585 () | 32168..32569 | + | 402 | WP_001222320.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C6992_RS28590 () | 32644..32859 | + | 216 | Protein_38 | IS3 family transposase IS1203 | Transposase |
| C6992_RS29595 () | 33158..33451 | + | 294 | Protein_39 | hypothetical protein | - |
| C6992_RS28605 () | 33680..33928 | + | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| C6992_RS29600 () | 33951..34058 | + | 108 | Protein_41 | incFII family plasmid replication initiator RepA | - |
| C6992_RS28620 () | 35013..35263 | + | 251 | Protein_42 | antitoxin | - |
| C6992_RS28625 () | 35260..35529 | + | 270 | WP_032314843.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6992_RS28635 () | 37070..38266 | - | 1197 | WP_001358663.1 | IS110 family transposase ISEc20 | Transposase |
| C6992_RS28645 () | 38632..38847 | + | 216 | WP_024165672.1 | class II holin family protein | - |
| C6992_RS28650 () | 38852..39196 | + | 345 | WP_000731192.1 | YdfR family protein | - |
| C6992_RS28655 () | 39247..39777 | + | 531 | Protein_48 | lysozyme | - |
| C6992_RS28665 () | 39935..40117 | + | 183 | WP_072164699.1 | hypothetical protein | - |
| C6992_RS29375 () | 40130..40263 | + | 134 | Protein_50 | hypothetical protein | - |
| C6992_RS29380 () | 40485..40670 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C6992_RS28680 () | 41195..41509 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| C6992_RS28685 () | 41586..42018 | + | 433 | Protein_53 | T3SS effector protein NleH | - |
| C6992_RS28695 () | 42291..43166 | + | 876 | WP_033815850.1 | hypothetical protein | VF |
| C6992_RS28700 () | 43255..44465 | + | 1211 | Protein_55 | IS3 family transposase IS629 | Transposase |
| C6992_RS28710 () | 44556..44993 | - | 438 | WP_000273581.1 | hypothetical protein | - |
| C6992_RS28715 () | 45242..45421 | - | 180 | WP_000526859.1 | hypothetical protein | VF |
| C6992_RS28725 () | 46308..46469 | - | 162 | Protein_58 | epoxyqueuosine reductase QueH | - |
| C6992_RS28730 () | 46520..46660 | + | 141 | Protein_59 | serine/threonine protein kinase | - |
| C6992_RS28735 () | 46784..47523 | + | 740 | Protein_60 | IS91 family transposase ISMno23 | Transposase |
| C6992_RS28740 () | 47807..48783 | - | 977 | Protein_61 | RepB family plasmid replication initiator protein | - |
| C6992_RS28750 () | 49429..49717 | - | 289 | Protein_62 | integrase core domain-containing protein | - |
| C6992_RS28755 () | 49902..51098 | - | 1197 | WP_033815853.1 | IS91 family transposase ISEc37 | Transposase |
| C6992_RS28760 () | 51098..51463 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6992_RS28765 () | 51509..51799 | + | 291 | WP_050438831.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C6992_RS28770 () | 51786..52331 | + | 546 | WP_000059852.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C6992_RS28775 () | 52261..52623 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| C6992_RS28780 () | 52623..53996 | + | 1374 | WP_170808476.1 | conjugal transfer protein TraH | - |
| C6992_RS28785 () | 53993..56468 | + | 2476 | Protein_69 | conjugal transfer mating pair stabilization protein TraG | - |
| C6992_RS28790 () | 56501..57714 | + | 1214 | WP_085947772.1 | IS3 family transposase ISCfr6 | Transposase |
| C6992_RS28795 () | 57718..58080 | + | 363 | Protein_71 | conjugal transfer protein TraG | - |
| C6992_RS28800 () | 58096..58581 | + | 486 | WP_000605868.1 | hypothetical protein | - |
| C6992_RS28805 () | 58630..59361 | + | 732 | WP_000782454.1 | complement resistance protein TraT | - |
| C6992_RS28810 () | 59613..61766 | + | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| C6992_RS28820 () | 61766..67034 | + | 5269 | Protein_75 | Multifunctional conjugation protein TraI | Relaxase |
| C6992_RS28825 () | 67054..67800 | + | 747 | WP_000205715.1 | conjugal transfer pilus acetylase TraX | - |
| C6992_RS28830 () | 67859..68719 | + | 861 | WP_000704529.1 | putative protein YcjY | VF |
| C6992_RS28835 () | 68822..69387 | + | 566 | Protein_78 | fertility inhibition protein FinO | - |
| C6992_RS28840 () | 69528..69917 | + | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| C6992_RS28845 () | 69914..70261 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C6992_RS28850 () | 70311..71848 | + | 1538 | Protein_81 | IS66 family transposase ISEc8 | Transposase |
| C6992_RS28855 () | 71887..72540 | + | 654 | Protein_82 | IS3 family transposase ISEc48 | Transposase |
| C6992_RS28860 () | 72532..72720 | - | 189 | WP_106898822.1 | transcriptional regulator | - |
| C6992_RS28865 () | 72787..74226 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6992_RS28870 () | 74230..76350 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6992_RS28875 () | 76400..79396 | - | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| C6992_RS28880 () | 79398..79913 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6992_RS28890 () | 80436..80932 | - | 497 | Protein_88 | IS3 family transposase IS629 | Transposase |
| C6992_RS28895 () | 81023..81388 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6992_RS28900 () | 81388..82584 | + | 1197 | WP_033815853.1 | IS91 family transposase ISEc37 | Transposase |
| C6992_RS28905 () | 82772..83140 | + | 369 | Protein_91 | DUF4113 domain-containing protein | - |
| C6992_RS28910 () | 83280..84242 | - | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| C6992_RS28915 () | 84239..85444 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| C6992_RS29605 () | 85818..85988 | + | 171 | WP_000402943.1 | hypothetical protein | - |
| C6992_RS28930 () | 86162..86413 | + | 252 | WP_001132893.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C6992_RS28935 () | 86410..86697 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6992_RS29610 () | 86699..86821 | + | 123 | Protein_97 | IS3 family transposase | - |
| C6992_RS28940 () | 86907..87272 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6992_RS28945 () | 87272..88468 | + | 1197 | WP_033815853.1 | IS91 family transposase ISEc37 | Transposase |
| C6992_RS28950 () | 88656..89024 | + | 369 | Protein_100 | DUF4113 domain-containing protein | - |
| C6992_RS28955 () | 89164..90126 | - | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| C6992_RS28960 () | 90123..91328 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| C6992_RS29615 () | 91702..91872 | + | 171 | WP_000402943.1 | hypothetical protein | - |
| C6992_RS28975 () | 92046..92297 | + | 252 | WP_001132893.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C6992_RS28980 () | 92294..92581 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6992_RS29620 () | 92583..92705 | + | 123 | Protein_106 | IS3 family transposase | - |
| C6992_RS28985 () | 92791..93156 | + | 366 | WP_000091308.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|