MGE detailed information
MGE type: Genomic_island MGE length: 34968 bp
Accession: NZ_CP027540 Location: 1002494..1037461 Organism: Streptococcus pneumoniae strain D39V Replicon: chromosome
Accession: NZ_CP027540 Location: 1002494..1037461 Organism: Streptococcus pneumoniae strain D39V Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPV_RS05210 () | 999483..1000712 | - | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| SPV_RS05215 () | 1000856..1001166 | - | 311 | Protein_970 | transposase family protein | - |
| SPV_RS05225 () | 1001614..1001835 | - | 222 | WP_000286251.1 | helix-turn-helix domain-containing protein | - |
| SPV_RS05230 () | 1002494..1003705 | - | 1212 | WP_000687010.1 | MFS transporter | - |
| SPV_RS05235 () | 1004088..1004732 | - | 645 | WP_000270072.1 | Putative acetyltransferase EpsM | VF |
| SPV_RS05240 () | 1004751..1005950 | - | 1200 | WP_000238677.1 | ATP-grasp domain-containing protein | - |
| SPV_RS05245 () | 1005965..1006915 | - | 951 | WP_000389975.1 | hypothetical protein | - |
| SPV_RS05250 () | 1006905..1008128 | - | 1224 | WP_000252068.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| SPV_RS05255 () | 1008130..1009440 | - | 1311 | WP_000423517.1 | AMP-binding protein | - |
| SPV_RS05260 () | 1009448..1010554 | - | 1107 | WP_000444113.1 | hypothetical protein | - |
| SPV_RS05265 () | 1010583..1012475 | - | 1893 | WP_000710678.1 | hypothetical protein | - |
| SPV_RS05270 () | 1012498..1013281 | - | 784 | Protein_980 | sugar phosphate isomerase/epimerase | - |
| SPV_RS05275 () | 1013291..1013917 | - | 627 | WP_000862562.1 | PIG-L family deacetylase | - |
| SPV_RS05280 () | 1013901..1015196 | - | 1296 | WP_000794307.1 | nucleotide sugar dehydrogenase | - |
| SPV_RS10990 () | 1015296..1015367 | - | 72 | WP_001809668.1 | peptide pheromone SHP3 | - |
| SPV_RS05285 () | 1015448..1016302 | + | 855 | WP_000837499.1 | XRE/MutR family transcriptional regulator | - |
| SPV_RS11360 () | 1016347..1018232 | - | 1886 | Protein_985 | relaxase/mobilization nuclease domain-containing protein | - |
| SPV_RS05305 () | 1018255..1018584 | - | 330 | WP_000263037.1 | MobC family plasmid mobilization relaxosome protein | - |
| SPV_RS05310 () | 1018594..1018953 | - | 360 | WP_000529543.1 | hypothetical protein | - |
| SPV_RS05320 () | 1019785..1020941 | - | 1157 | Protein_988 | hypothetical protein | - |
| SPV_RS05325 () | 1020969..1021730 | - | 762 | WP_000405357.1 | zeta toxin family protein | Toxin Detail |
| SPV_RS05330 () | 1021730..1022206 | - | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SPV_RS05335 () | 1022651..1022932 | - | 282 | WP_000266233.1 | hypothetical protein | - |
| SPV_RS05340 () | 1022978..1023295 | - | 318 | WP_000995820.1 | hypothetical protein | - |
| SPV_RS05345 () | 1023381..1025120 | - | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
| SPV_RS05350 () | 1025283..1026167 | - | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
| SPV_RS05355 () | 1026279..1027133 | - | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| SPV_RS05360 () | 1027133..1027948 | - | 816 | WP_000262006.1 | ATP-grasp domain-containing protein | - |
| SPV_RS05365 () | 1028010..1028198 | - | 189 | WP_000179769.1 | hypothetical protein | - |
| SPV_RS05370 () | 1028520..1029086 | - | 567 | WP_000234985.1 | hypothetical protein | - |
| SPV_RS05375 () | 1029354..1031033 | - | 1680 | WP_106269343.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| SPV_RS11365 () | 1031125..1031286 | - | 162 | WP_000368174.1 | hypothetical protein | - |
| SPV_RS11220 () | 1031970..1032284 | - | 315 | WP_161801538.1 | hypothetical protein | - |
| SPV_RS05390 () | 1032250..1032639 | - | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| SPV_RS05395 () | 1033027..1033821 | - | 795 | WP_000677519.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| SPV_RS05400 () | 1033821..1034828 | - | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| SPV_RS05405 () | 1034828..1035835 | - | 1008 | WP_001244692.1 | Ferric enterobactin transport system permease protein FepD | VF |
| SPV_RS05410 () | 1035825..1036850 | - | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SPV_RS05420 () | 1037243..1037461 | - | 219 | WP_000885335.1 | helix-turn-helix transcriptional regulator | - |
| SPV_RS05425 () | 1037707..1037985 | - | 279 | WP_000710803.1 | hypothetical protein | - |
| SPV_RS05430 () | 1038199..1039830 | - | 1632 | WP_000914581.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| SPV_RS05435 () | 1039904..1040878 | - | 975 | WP_001227739.1 | DUF1002 domain-containing protein | - |
| SPV_RS05440 () | 1040952..1041566 | - | 615 | WP_000476388.1 | cell wall hydrolase Pmp23 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae R6 | Genomic island | TA6282 | NC_003098 | 920239..953000 | 0.001 |