MGE detailed information
MGE type: Mobilizable plasmid MGE length: 104198 bp
Accession: NZ_CP027341 Location: 1..104198 Organism: Escherichia coli strain 2015C-3121 Replicon: plasmid unnamed
Accession: NZ_CP027341 Location: 1..104198 Organism: Escherichia coli strain 2015C-3121 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N25_RS29135 () | 1..673 | - | 673 | Protein_0 | Rpn family recombination-promoting nuclease/putative transposase | - |
| C6N25_RS29140 () | 799..1065 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| C6N25_RS29145 () | 1158..1592 | - | 435 | WP_000218857.1 | hypothetical protein | - |
| C6N25_RS29155 () | 2012..2314 | - | 303 | WP_000386902.1 | hypothetical protein | - |
| C6N25_RS29160 () | 3587..5090 | - | 1504 | Protein_4 | hypothetical protein | - |
| C6N25_RS29165 () | 5503..6036 | - | 534 | Protein_5 | IS3 family transposase ISLad1 | Transposase |
| C6N25_RS29170 () | 6127..6492 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6N25_RS29175 () | 6492..7679 | + | 1188 | WP_106888924.1 | IS91 family transposase ISEc37 | Transposase |
| C6N25_RS29180 () | 8276..8419 | + | 144 | Protein_8 | IS21 family transposase IS100kyp | Transposase |
| C6N25_RS29190 () | 8491..8763 | + | 273 | WP_000019159.1 | hypothetical protein | - |
| C6N25_RS29195 () | 8744..9888 | + | 1145 | Protein_10 | IS91 family transposase | - |
| C6N25_RS29200 () | 10413..10637 | + | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| C6N25_RS29205 () | 10634..11021 | + | 388 | Protein_12 | type II toxin-antitoxin system death-on-curing family toxin | - |
| C6N25_RS29210 () | 11305..11503 | - | 199 | Protein_13 | DNA-binding protein | - |
| C6N25_RS29215 () | 11567..11848 | - | 282 | WP_000220566.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6N25_RS29220 () | 11838..12088 | - | 251 | Protein_15 | plasmid stabilization protein | - |
| C6N25_RS29240 () | 13281..13482 | + | 202 | Protein_16 | DNA-binding protein | - |
| C6N25_RS29245 () | 13529..14634 | - | 1106 | Protein_17 | N-acetylneuraminate epimerase | - |
| C6N25_RS29250 () | 14654..15367 | - | 714 | WP_024178317.1 | N-acetylneuraminic acid channel protein | - |
| C6N25_RS29255 () | 15511..15615 | - | 105 | Protein_19 | ROK family protein | - |
| C6N25_RS29260 () | 15615..16000 | - | 386 | Protein_20 | hypothetical protein | - |
| C6N25_RS29265 () | 16024..17511 | - | 1488 | WP_001094644.1 | MFS transporter | - |
| C6N25_RS29270 () | 17592..18485 | - | 894 | WP_000123089.1 | N-acetylneuraminate lyase | - |
| C6N25_RS29275 () | 18931..19630 | + | 700 | Protein_23 | transcriptional regulator NanR | - |
| C6N25_RS29285 () | 20202..20567 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6N25_RS29290 () | 20567..21754 | + | 1188 | WP_106888924.1 | IS91 family transposase ISEc37 | Transposase |
| C6N25_RS29295 () | 22056..23006 | - | 951 | WP_000038327.1 | Recombination-promoting nuclease RpnA | VF |
| C6N25_RS29300 () | 23071..23337 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| C6N25_RS29305 () | 23430..23864 | - | 435 | WP_000218857.1 | hypothetical protein | - |
| C6N25_RS30505 () | 24160..24594 | + | 435 | WP_198551017.1 | hypothetical protein | - |
| C6N25_RS29320 () | 24596..25096 | - | 501 | WP_000117633.1 | antirestriction protein ArdA | - |
| C6N25_RS29330 () | 25561..26157 | - | 597 | WP_000978007.1 | hypothetical protein | - |
| C6N25_RS29335 () | 26154..26873 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6N25_RS29340 () | 26870..27304 | - | 435 | Protein_33 | conjugation system SOS inhibitor PsiB | - |
| C6N25_RS29345 () | 27359..29317 | - | 1959 | WP_106888925.1 | ParB/RepB/Spo0J family partition protein | - |
| C6N25_RS29350 () | 29383..29616 | - | 234 | WP_021564200.1 | DUF905 family protein | - |
| C6N25_RS29355 () | 29674..30201 | - | 528 | WP_033885676.1 | single-stranded DNA-binding protein | - |
| C6N25_RS30275 () | 30639..30992 | - | 354 | WP_072121439.1 | hypothetical protein | - |
| C6N25_RS29365 () | 30955..31146 | - | 192 | WP_001027514.1 | hypothetical protein | - |
| C6N25_RS29370 () | 31146..31565 | - | 420 | WP_000271712.1 | DUF1380 family protein | - |
| C6N25_RS29375 () | 31612..31914 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| C6N25_RS29390 () | 32454..33224 | - | 771 | WP_001006245.1 | hypothetical protein | - |
| C6N25_RS29395 () | 33269..33703 | - | 435 | WP_000274414.1 | DUF1380 family protein | - |
| C6N25_RS29400 () | 33717..33938 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| C6N25_RS29405 () | 33939..34622 | - | 684 | WP_000086113.1 | DNA methylase | - |
| C6N25_RS29410 () | 34699..35011 | - | 313 | Protein_45 | hypothetical protein | - |
| C6N25_RS29415 () | 35008..35910 | - | 903 | WP_077775375.1 | DUF1281 domain-containing protein | - |
| C6N25_RS29430 () | 36615..36863 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| C6N25_RS29435 () | 36860..37297 | + | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6N25_RS29440 () | 37297..38571 | + | 1275 | WP_000457488.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C6N25_RS29445 () | 38573..38989 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| C6N25_RS29450 () | 38982..39962 | - | 981 | WP_000688509.1 | plasmid segregation protein ParM | - |
| C6N25_RS29455 () | 40374..40682 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| C6N25_RS29460 () | 40769..41413 | - | 645 | WP_001144036.1 | ParA family protein | - |
| C6N25_RS29465 () | 41594..42400 | - | 807 | WP_000016973.1 | site-specific integrase | - |
| C6N25_RS29470 () | 42401..42706 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6N25_RS29475 () | 42708..42926 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6N25_RS29480 () | 43773..45011 | + | 1239 | WP_024178320.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| C6N25_RS29485 () | 44995..45825 | + | 831 | WP_016230897.1 | HAD-IIB family hydrolase | - |
| C6N25_RS29490 () | 45825..46841 | + | 1017 | WP_000583427.1 | Gfo/Idh/MocA family oxidoreductase | - |
| C6N25_RS29495 () | 46843..47112 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| C6N25_RS29500 () | 47109..48640 | + | 1532 | Protein_61 | NAD(P)/FAD-dependent oxidoreductase | - |
| C6N25_RS29505 () | 48673..49125 | - | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| C6N25_RS29510 () | 49454..49711 | + | 258 | WP_000371887.1 | hypothetical protein | - |
| C6N25_RS29515 () | 49711..50301 | + | 591 | WP_062891001.1 | hypothetical protein | - |
| C6N25_RS30510 () | 50319..50537 | - | 219 | Protein_65 | hypothetical protein | - |
| C6N25_RS29525 () | 50695..50895 | + | 201 | WP_000762569.1 | hypothetical protein | - |
| C6N25_RS30280 () | 50935..51117 | + | 183 | WP_001368563.1 | hypothetical protein | - |
| C6N25_RS29530 () | 51110..51976 | + | 867 | WP_000589629.1 | DMT family transporter | - |
| C6N25_RS29535 () | 52241..52403 | + | 163 | Protein_69 | PAAR domain-containing protein | - |
| C6N25_RS29540 () | 52460..53065 | + | 606 | WP_000177552.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| C6N25_RS29545 () | 53062..53979 | + | 918 | WP_000173389.1 | Phosphatidate cytidylyltransferase | VF |
| C6N25_RS29550 () | 53983..54624 | + | 642 | WP_000989025.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| C6N25_RS29555 () | 54617..56377 | + | 1761 | WP_000185306.1 | bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase | - |
| C6N25_RS29560 () | 56374..56556 | + | 183 | Protein_74 | hypothetical protein | - |
| C6N25_RS29565 () | 56589..58069 | - | 1481 | Protein_75 | IS66 family transposase | - |
| C6N25_RS29570 () | 58100..58450 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| C6N25_RS29575 () | 58447..58872 | - | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| C6N25_RS29585 () | 59029..59454 | + | 426 | WP_001249909.1 | nucleoside triphosphatase NudI | - |
| C6N25_RS29590 () | 59512..59678 | + | 167 | Protein_79 | IS4 family transposase ISCro3 | Transposase |
| C6N25_RS29595 () | 59721..59942 | - | 222 | Protein_80 | IS4 family transposase ISCro3 | Transposase |
| C6N25_RS29600 () | 60033..60398 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6N25_RS29605 () | 60398..61585 | + | 1188 | WP_106888924.1 | IS91 family transposase ISEc37 | Transposase |
| C6N25_RS29610 () | 61772..62062 | - | 291 | WP_062892292.1 | hypothetical protein | - |
| C6N25_RS29615 () | 62130..62787 | - | 658 | Protein_84 | hypothetical protein | - |
| C6N25_RS29620 () | 62890..63480 | - | 591 | WP_000977350.1 | Serine acetyltransferase | VF |
| C6N25_RS29625 () | 63584..63871 | - | 288 | WP_000222760.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6N25_RS29630 () | 63868..64119 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C6N25_RS29645 () | 65078..65950 | - | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| C6N25_RS29660 () | 66653..67294 | + | 642 | WP_077746831.1 | transcription termination factor NusG | - |
| C6N25_RS29665 () | 67435..68100 | + | 666 | WP_000154145.1 | hypothetical protein | - |
| C6N25_RS29675 () | 68366..68986 | + | 621 | WP_000176497.1 | DUF1449 family protein | - |
| C6N25_RS29680 () | 69013..70707 | + | 1695 | WP_001532126.1 | flotillin family protein | - |
| C6N25_RS29685 () | 70713..71030 | + | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| C6N25_RS29690 () | 71224..72111 | + | 888 | WP_033810768.1 | hypothetical protein | - |
| C6N25_RS29695 () | 72104..72544 | - | 441 | WP_000468139.1 | hypothetical protein | - |
| C6N25_RS29700 () | 72647..73714 | + | 1068 | WP_001170193.1 | hypothetical protein | VF |
| C6N25_RS29705 () | 73719..74156 | + | 438 | WP_000539686.1 | type IV pilus biogenesis protein PilM | - |
| C6N25_RS29710 () | 74187..75806 | + | 1620 | WP_001034996.1 | Outer membrane lipoprotein BfpB | VF |
| C6N25_RS29715 () | 75827..77121 | + | 1295 | Protein_99 | type 4b pilus protein PilO2 | - |
| C6N25_RS29720 () | 77111..77563 | + | 453 | WP_001532123.1 | hypothetical protein | VF |
| C6N25_RS29725 () | 77612..78106 | + | 495 | WP_106888928.1 | hypothetical protein | - |
| C6N25_RS29730 () | 78138..80297 | + | 2160 | WP_062899202.1 | DotA/TraY family protein | - |
| C6N25_RS29735 () | 80379..81026 | + | 648 | WP_001563237.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6N25_RS29740 () | 81091..81300 | - | 210 | WP_000062946.1 | HEAT repeat domain-containing protein | - |
| C6N25_RS29745 () | 81395..81526 | + | 132 | Protein_105 | ethanolamine utilization protein EutE | - |
| C6N25_RS29750 () | 81683..81844 | + | 162 | WP_001138649.1 | hypothetical protein | - |
| C6N25_RS29755 () | 81841..81993 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C6N25_RS29760 () | 82326..82508 | + | 183 | WP_021580031.1 | hypothetical protein | - |
| C6N25_RS29765 () | 82561..82713 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C6N25_RS29770 () | 83047..83229 | + | 183 | WP_021580031.1 | hypothetical protein | - |
| C6N25_RS29780 () | 83282..83434 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C6N25_RS29785 () | 83767..84009 | + | 243 | WP_000064387.1 | hypothetical protein | - |
| C6N25_RS29790 () | 84102..85637 | - | 1536 | WP_199852867.1 | phosphoethanolamine transferase | - |
| C6N25_RS29795 () | 85837..86292 | - | 456 | WP_001205141.1 | DUF2569 family protein | - |
| C6N25_RS29800 () | 86380..87003 | - | 624 | WP_001158019.1 | hypothetical protein | - |
| C6N25_RS29805 () | 87152..87525 | + | 374 | Protein_116 | thermonuclease family protein | - |
| C6N25_RS29815 () | 87967..88158 | + | 192 | WP_000789656.1 | hypothetical protein | - |
| C6N25_RS29820 () | 88169..88534 | + | 366 | WP_001532099.1 | hypothetical protein | - |
| C6N25_RS29825 () | 88544..88735 | + | 192 | WP_000264910.1 | hypothetical protein | - |
| C6N25_RS29830 () | 88769..89092 | + | 324 | WP_000323308.1 | hypothetical protein | - |
| C6N25_RS29840 () | 90623..91957 | + | 1335 | WP_106888930.1 | conjugal transfer protein TrbA | - |
| C6N25_RS29845 () | 91954..93072 | + | 1119 | WP_000155610.1 | DsbC family protein | - |
| C6N25_RS29850 () | 93053..95356 | + | 2304 | WP_000077651.1 | TraM recognition domain-containing protein | - |
| C6N25_RS29860 () | 95638..96866 | + | 1229 | WP_169073214.1 | IS3 family transposase IS2 | Transposase |
| C6N25_RS29870 () | 97171..97401 | + | 231 | WP_001368502.1 | hypothetical protein | - |
| C6N25_RS29875 () | 98114..100163 | + | 2050 | Protein_126 | TonB-dependent siderophore receptor IreA | - |
| C6N25_RS29880 () | 100409..100840 | - | 432 | WP_001335086.1 | hypothetical protein | - |
| C6N25_RS29885 () | 100908..103618 | - | 2711 | Protein_128 | Protein TraI | Relaxase |
| C6N25_RS29890 () | 103630..103962 | - | 333 | WP_001291058.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|