MGE detailed information
MGE type: Prophage MGE length: 52236 bp
Accession: NZ_CP027331 Location: 1531673..1583908 Organism: Escherichia coli strain 2013C-3277 Replicon: chromosome
Accession: NZ_CP027331 Location: 1531673..1583908 Organism: Escherichia coli strain 2013C-3277 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ63_RS08595 () | 1527740..1528873 | + | 1134 | WP_000837924.1 | porin OmpN | - |
| MJ63_RS08600 () | 1529014..1529448 | + | 435 | WP_001295593.1 | universal stress protein UspF | - |
| MJ63_RS08605 () | 1530252..1531270 | - | 1019 | Protein_1575 | M85 family metallopeptidase | - |
| MJ63_RS08615 () | 1531673..1531942 | - | 270 | WP_001101700.1 | phage tail fiber C-terminal domain-containing protein | - |
| MJ63_RS08620 () | 1531944..1533257 | - | 1314 | WP_106913215.1 | phage tail protein | - |
| MJ63_RS08625 () | 1533322..1533945 | - | 624 | WP_001408020.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| MJ63_RS08630 () | 1534014..1537490 | - | 3477 | WP_106913216.1 | host specificity protein J | - |
| MJ63_RS08635 () | 1537737..1538369 | - | 633 | WP_129014765.1 | tail assembly protein | - |
| MJ63_RS08640 () | 1538315..1539058 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| MJ63_RS08645 () | 1539069..1539767 | - | 699 | WP_060552858.1 | phage minor tail protein L | - |
| MJ63_RS08650 () | 1539767..1540096 | - | 330 | WP_000847298.1 | phage tail protein | - |
| MJ63_RS31175 () | 1540093..1542705 | - | 2613 | Protein_1584 | phage tail tape measure protein | - |
| MJ63_RS08660 () | 1542686..1543099 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| MJ63_RS08665 () | 1543126..1543548 | - | 423 | WP_000479051.1 | phage minor tail protein G | - |
| MJ63_RS08670 () | 1543562..1544314 | - | 753 | WP_000235101.1 | Ig domain-containing protein | - |
| MJ63_RS08675 () | 1544322..1544717 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| MJ63_RS08680 () | 1544714..1545292 | - | 579 | WP_000975099.1 | phage tail protein | - |
| MJ63_RS08685 () | 1545304..1545657 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| MJ63_RS08690 () | 1545669..1546064 | - | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| MJ63_RS08695 () | 1546106..1547131 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| MJ63_RS08700 () | 1547187..1547519 | - | 333 | WP_001295978.1 | head decoration protein | - |
| MJ63_RS08705 () | 1547529..1548848 | - | 1320 | WP_000123254.1 | S49 family peptidase | - |
| MJ63_RS08710 () | 1548829..1550430 | - | 1602 | WP_024026143.1 | phage portal protein | - |
| MJ63_RS08715 () | 1550427..1550633 | - | 207 | WP_000198153.1 | gpW family protein | - |
| MJ63_RS08720 () | 1550630..1552556 | - | 1927 | Protein_1597 | phage terminase large subunit family protein | - |
| MJ63_RS08725 () | 1552531..1553076 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| MJ63_RS08740 () | 1553518..1553985 | - | 468 | WP_001082545.1 | lysis protein | - |
| MJ63_RS08745 () | 1554284..1554817 | - | 534 | WP_000992167.1 | lysozyme | - |
| MJ63_RS08750 () | 1554868..1555212 | - | 345 | WP_047086596.1 | YdfR family protein | - |
| MJ63_RS08755 () | 1555217..1555432 | - | 216 | WP_000284518.1 | class II holin family protein | - |
| MJ63_RS08760 () | 1555505..1556182 | + | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| MJ63_RS08765 () | 1556182..1556529 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| MJ63_RS08770 () | 1556549..1558120 | + | 1572 | WP_000381395.1 | IS66 family transposase | - |
| MJ63_RS08775 () | 1558327..1559220 | + | 894 | WP_089577656.1 | Tir-cytoskeleton coupling protein TccP2 | - |
| MJ63_RS08780 () | 1559346..1559615 | - | 270 | WP_001023445.1 | phage tail fiber C-terminal domain-containing protein | - |
| MJ63_RS08785 () | 1559688..1560071 | + | 384 | Protein_1608 | IS66 family transposase | - |
| MJ63_RS08790 () | 1560069..1560344 | - | 276 | Protein_1609 | DUF1737 domain-containing protein | - |
| MJ63_RS08795 () | 1560666..1560918 | - | 253 | Protein_1610 | DUF3927 family protein | - |
| MJ63_RS08800 () | 1560915..1561277 | - | 363 | Protein_1611 | tellurite resistance TerB family protein | - |
| MJ63_RS08805 () | 1561515..1562336 | - | 822 | WP_000762928.1 | antitermination protein | - |
| MJ63_RS08810 () | 1562333..1562707 | - | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| MJ63_RS08815 () | 1562720..1563769 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| MJ63_RS08820 () | 1563771..1564043 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| MJ63_RS08825 () | 1564165..1564509 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| MJ63_RS08830 () | 1564629..1564784 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| MJ63_RS08835 () | 1565075..1565632 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| MJ63_RS08840 () | 1565634..1565852 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| MJ63_RS08845 () | 1565980..1566291 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| MJ63_RS08850 () | 1566284..1566511 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| MJ63_RS08855 () | 1566508..1566789 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| MJ63_RS08860 () | 1566822..1567583 | - | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| MJ63_RS08865 () | 1567609..1568350 | - | 742 | Protein_1624 | ATP-binding protein | - |
| MJ63_RS08870 () | 1568357..1569319 | - | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| MJ63_RS08875 () | 1569342..1569767 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| MJ63_RS08880 () | 1569764..1570066 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| MJ63_RS08885 () | 1570164..1570535 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| MJ63_RS08890 () | 1570556..1570747 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| MJ63_RS08895 () | 1570749..1570988 | + | 240 | WP_050439653.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MJ63_RS08900 () | 1571314..1571466 | + | 153 | WP_001427316.1 | DUF1391 family protein | - |
| MJ63_RS08905 () | 1571887..1572108 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| MJ63_RS08910 () | 1572102..1572278 | + | 177 | WP_000245534.1 | hypothetical protein | - |
| MJ63_RS08915 () | 1572352..1572627 | + | 276 | WP_001307773.1 | hypothetical protein | - |
| MJ63_RS08920 () | 1572726..1575377 | + | 2652 | WP_032346644.1 | exodeoxyribonuclease VIII | - |
| MJ63_RS08925 () | 1575370..1576179 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| MJ63_RS08930 () | 1576236..1576430 | + | 195 | WP_050439817.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| MJ63_RS08935 () | 1576423..1576611 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 1576429..1576607 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 1576429..1576607 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 1576429..1576607 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 1576429..1576607 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| MJ63_RS08940 () | 1576718..1576999 | + | 282 | WP_001443927.1 | excisionase | - |
| MJ63_RS08945 () | 1576965..1578041 | + | 1077 | WP_001189091.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| - () | 1578172..1578406 | + | 235 | - | - | Antitoxin Detail |
| - () | 1578173..1578276 | - | 104 | - | - | Toxin Detail |
| MJ63_RS08950 () | 1578434..1578775 | - | 342 | WP_000976492.1 | YebY family protein | - |
| MJ63_RS08955 () | 1578788..1579660 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| MJ63_RS08960 () | 1579664..1580038 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| MJ63_RS08965 () | 1580177..1580407 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| MJ63_RS08970 () | 1580509..1581165 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| MJ63_RS08975 () | 1581189..1581851 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| MJ63_RS08980 () | 1581848..1583908 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| MJ63_RS08985 () | 1584117..1584776 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| MJ63_RS08990 () | 1585103..1585459 | - | 357 | WP_001295500.1 | protein YebF | - |
| MJ63_RS08995 () | 1585526..1585816 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| MJ63_RS09000 () | 1585950..1587128 | + | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| MJ63_RS09005 () | 1587184..1587825 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|