MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP027219 Location: 4708497..4717848 Organism: Escherichia coli strain 2015C-3163 Replicon: chromosome
Accession: NZ_CP027219 Location: 4708497..4717848 Organism: Escherichia coli strain 2015C-3163 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H73_RS25660 () | 4704126..4704611 | + | 486 | WP_000849570.1 | antirestriction protein | - |
| C6H73_RS25665 () | 4704627..4705103 | + | 477 | WP_001186727.1 | RadC family protein | - |
| C6H73_RS25670 () | 4705166..4705387 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| C6H73_RS25675 () | 4705550..4705918 | + | 369 | WP_001339471.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| C6H73_RS25680 () | 4706008..4706385 | + | 378 | WP_000854748.1 | TA system toxin CbtA family protein | - |
| C6H73_RS25685 () | 4706382..4706870 | + | 489 | WP_000761721.1 | hypothetical protein | - |
| C6H73_RS25690 () | 4706882..4707079 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| C6H73_RS25695 () | 4707176..4707748 | + | 573 | WP_001290246.1 | DUF4942 domain-containing protein | - |
| C6H73_RS25705 () | 4708497..4710035 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C6H73_RS25715 () | 4710401..4711735 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C6H73_RS25720 () | 4711815..4713962 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| C6H73_RS25725 () | 4714021..4715478 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| C6H73_RS25730 () | 4715715..4717232 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| C6H73_RS25735 () | 4717351..4717524 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| C6H73_RS25740 () | 4717552..4717848 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| C6H73_RS25750 () | 4718075..4718347 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| C6H73_RS25755 () | 4718359..4718589 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| C6H73_RS25760 () | 4718770..4720401 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| C6H73_RS25765 () | 4720398..4721117 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |